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Do you able to find such identifiers in the node items? Not sure if they are should be just 0,1,2,... . So it do only depend on the way how you could access them.
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Can you send new bug report with clear steps to reproduce the issue? This is completely separate topic.
Thank for report, since you assign material to the object slot instead of mesh the geometry nodes can not access this material. You should not use object materials in workflow with geometry nodes.…
You can try the today 4.3 blender version to see the nested instances in the spreadsheet editor. Bounding box only computed for real geometry, instances is ignored, and this is expected due to…