Fix T82384: Custom Properties for ShaderNodeTree do not save in blend files.

Not sure why those were excluded, there is no reason not to write ID
data itself for embedded IDs...

source/blender/blenkernel/intern/collection.c

@@ -174,6 +174,8 @@ static void collection_foreach_id(ID *id, LibraryForeachIDData *data)
 
 void BKE_collection_blend_write_nolib(BlendWriter *writer, Collection *collection)
 {
+  BKE_id_blend_write(writer, &collection->id);
+
   /* Shared function for collection data-blocks and scene master collection. */
   BKE_previewimg_blend_write(writer, collection->preview);
 
@@ -198,7 +200,6 @@ static void collection_blend_write(BlendWriter *writer, ID *id, const void *id_a
 
     /* write LibData */
     BLO_write_id_struct(writer, Collection, id_address, &collection->id);
-    BKE_id_blend_write(writer, &collection->id);
 
     BKE_collection_blend_write_nolib(writer, collection);
   }

source/blender/blenkernel/intern/node.c

@@ -404,6 +404,8 @@ static void write_node_socket_interface(BlendWriter *writer, bNodeSocket *sock)
 /* this is only direct data, tree itself should have been written */
 void ntreeBlendWrite(BlendWriter *writer, bNodeTree *ntree)
 {
+  BKE_id_blend_write(writer, &ntree->id);
+
   /* for link_list() speed, we write per list */
 
   if (ntree->adt) {
@@ -525,9 +527,6 @@ static void ntree_blend_write(BlendWriter *writer, ID *id, const void *id_addres
     ntree->execdata = NULL;
 
     BLO_write_id_struct(writer, bNodeTree, id_address, &ntree->id);
-    /* Note that trees directly used by other IDs (materials etc.) are not 'real' ID, they cannot
-     * be linked, etc., so we write actual id data here only, for 'real' ID trees. */
-    BKE_id_blend_write(writer, &ntree->id);
 
     ntreeBlendWrite(writer, ntree);
   }