EEVEE: Remove softness parameters from RNA & UI

Keep it in DNA for backward compatibility

.clang-format

@@ -224,7 +224,9 @@ ForEachMacros:
   - LISTBASE_CIRCULAR_BACKWARD_BEGIN
   - LISTBASE_CIRCULAR_FORWARD_BEGIN
   - LISTBASE_FOREACH
+  - LISTBASE_FOREACH_BACKWARD
   - LISTBASE_FOREACH_MUTABLE
+  - LISTBASE_FOREACH_BACKWARD_MUTABLE
   - MAN2D_ITER_AXES_BEGIN
   - MAN_ITER_AXES_BEGIN
   - NODE_INSTANCE_HASH_ITER

CMakeLists.txt

@@ -182,6 +182,8 @@ if(UNIX AND NOT APPLE)
   set(_init_SDL                            OFF)
   set(_init_FFTW3                          OFF)
   set(_init_OPENSUBDIV                     OFF)
+  set(_init_OPENVDB                        OFF)
+  set(_init_OPENIMAGEDENOISE               OFF)
 elseif(WIN32)
   set(_init_JACK                           OFF)
 elseif(APPLE)
@@ -237,11 +239,12 @@ option(WITH_OPENCOLORIO   "Enable OpenColorIO color management" ${_init_OPENCOLO
 
 # Compositor
 option(WITH_COMPOSITOR         "Enable the tile based nodal compositor" ON)
+option(WITH_OPENIMAGEDENOISE   "Enable the OpenImageDenoise compositing node" ${_init_OPENIMAGEDENOISE})
 
 option(WITH_OPENSUBDIV    "Enable OpenSubdiv for surface subdivision" ${_init_OPENSUBDIV})
 
-option(WITH_OPENVDB       "Enable features relying on OpenVDB" OFF)
-option(WITH_OPENVDB_BLOSC "Enable blosc compression for OpenVDB, only enable if OpenVDB was built with blosc support" OFF)
+option(WITH_OPENVDB       "Enable features relying on OpenVDB" ${_init_OPENVDB})
+option(WITH_OPENVDB_BLOSC "Enable blosc compression for OpenVDB, only enable if OpenVDB was built with blosc support" ${_init_OPENVDB})
 option(WITH_OPENVDB_3_ABI_COMPATIBLE "Assume OpenVDB library has been compiled with version 3 ABI compatibility" OFF)
 mark_as_advanced(WITH_OPENVDB_3_ABI_COMPATIBLE)
 
@@ -1427,7 +1430,6 @@ if(CMAKE_COMPILER_IS_GNUCC)
   ADD_CHECK_CXX_COMPILER_FLAG(CXX_WARNINGS CXX_WARN_NO_DIV_BY_ZERO -Wno-div-by-zero)
   ADD_CHECK_CXX_COMPILER_FLAG(CXX_WARNINGS CXX_WARN_TYPE_LIMITS -Wtype-limits)
   ADD_CHECK_CXX_COMPILER_FLAG(CXX_WARNINGS CXX_WARN_ERROR_RETURN_TYPE  -Werror=return-type)
-  ADD_CHECK_CXX_COMPILER_FLAG(CXX_WARNINGS CXX_WARN_ERROR_IMPLICIT_FUNCTION_DECLARATION -Werror=implicit-function-declaration)
   ADD_CHECK_CXX_COMPILER_FLAG(CXX_WARNINGS CXX_WARN_NO_CHAR_SUBSCRIPTS -Wno-char-subscripts)
   ADD_CHECK_CXX_COMPILER_FLAG(CXX_WARNINGS CXX_WARN_NO_UNKNOWN_PRAGMAS -Wno-unknown-pragmas)
   ADD_CHECK_CXX_COMPILER_FLAG(CXX_WARNINGS CXX_WARN_POINTER_ARITH -Wpointer-arith)
@@ -1760,6 +1762,7 @@ if(FIRST_RUN)
   info_cfg_option(WITH_CYCLES)
   info_cfg_option(WITH_FREESTYLE)
   info_cfg_option(WITH_OPENCOLORIO)
+  info_cfg_option(WITH_OPENIMAGEDENOISE)
   info_cfg_option(WITH_OPENVDB)
   info_cfg_option(WITH_ALEMBIC)
 

GNUmakefile

@@ -231,10 +231,21 @@ endif
 # build tool
 
 ifneq "$(findstring ninja, $(MAKECMDGOALS))" ""
-	BUILD_COMMAND:=ninja
 	BUILD_CMAKE_ARGS:=$(BUILD_CMAKE_ARGS) -G Ninja
+	BUILD_COMMAND:=ninja
+	DEPS_BUILD_COMMAND:=ninja
 else
-	BUILD_COMMAND:=make -s
+	ifneq ("$(wildcard $(BUILD_DIR)/build.ninja)","")
+		BUILD_COMMAND:=ninja
+	else
+		BUILD_COMMAND:=make -s
+	endif
+
+	ifneq ("$(wildcard $(DEPS_BUILD_DIR)/build.ninja)","")
+		DEPS_BUILD_COMMAND:=ninja
+	else
+		DEPS_BUILD_COMMAND:=make -s
+	endif
 endif
 
 # -----------------------------------------------------------------------------
@@ -329,7 +340,7 @@ deps: .FORCE
 
 	@echo
 	@echo Building dependencies ...
-	$(BUILD_COMMAND) -C "$(DEPS_BUILD_DIR)" -j $(NPROCS) $(DEPS_TARGET)
+	$(DEPS_BUILD_COMMAND) -C "$(DEPS_BUILD_DIR)" -j $(NPROCS) $(DEPS_TARGET)
 	@echo
 	@echo Dependencies successfully built and installed to $(DEPS_INSTALL_DIR).
 	@echo
@@ -364,7 +375,7 @@ package_archive: .FORCE
 # Tests
 #
 test: .FORCE
-	cd $(BUILD_DIR) ; ctest . --output-on-failure
+	python3 ./build_files/utils/make_test.py "$(BUILD_DIR)"
 
 # run pep8 check check on scripts we distribute.
 test_pep8: .FORCE
@@ -520,17 +531,7 @@ icons_geom: .FORCE
 	    "$(BLENDER_DIR)/release/datafiles/blender_icons_geom_update.py"
 
 update: .FORCE
-	if [ "$(OS_NCASE)" = "darwin" ] && [ ! -d "../lib/$(OS_NCASE)" ]; then \
-		svn checkout https://svn.blender.org/svnroot/bf-blender/trunk/lib/$(OS_NCASE) ../lib/$(OS_NCASE) ; \
-	fi
-	if [ -d "../lib" ]; then \
-		svn cleanup ../lib/* ; \
-		svn update ../lib/* ; \
-	fi
-	git pull --rebase
-	git submodule update --init --recursive
-	git submodule foreach git checkout master
-	git submodule foreach git pull --rebase origin master
+	python3 ./build_files/utils/make_update.py
 
 format: .FORCE
 	PATH="../lib/${OS_NCASE}/llvm/bin/:$(PATH)" \

build_files/build_environment/CMakeLists.txt

@@ -43,6 +43,7 @@ project("BlenderDependencies")
 cmake_minimum_required(VERSION 3.5)
 
 include(ExternalProject)
+include(cmake/check_software.cmake)
 include(cmake/options.cmake)
 include(cmake/versions.cmake)
 
@@ -57,7 +58,6 @@ else()
 endif()
 
 include(cmake/zlib.cmake)
-include(cmake/blendthumb.cmake)
 include(cmake/openal.cmake)
 include(cmake/png.cmake)
 include(cmake/jpeg.cmake)
@@ -90,12 +90,14 @@ include(cmake/tbb.cmake)
 include(cmake/openvdb.cmake)
 include(cmake/python.cmake)
 include(cmake/python_site_packages.cmake)
+include(cmake/package_python.cmake)
 include(cmake/numpy.cmake)
 if(UNIX AND NOT APPLE)
   # Rely on PugiXML compiled with OpenImageIO
 else()
   include(cmake/pugixml.cmake)
 endif()
+include(cmake/openimagedenoise.cmake)
 
 if(WITH_WEBP)
   include(cmake/webp.cmake)

build_files/build_environment/cmake/blendthumb.cmake

@@ -1,67 +0,0 @@
-# ***** BEGIN GPL LICENSE BLOCK *****
-#
-# This program is free software; you can redistribute it and/or
-# modify it under the terms of the GNU General Public License
-# as published by the Free Software Foundation; either version 2
-# of the License, or (at your option) any later version.
-#
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-# GNU General Public License for more details.
-#
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software Foundation,
-# Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
-#
-# ***** END GPL LICENSE BLOCK *****
-
-if(BUILD_MODE STREQUAL Release)
-  if(WIN32)
-    set(THUMB_DIR ${CMAKE_CURRENT_SOURCE_DIR}/../../release/windows/blendthumb)
-
-    ExternalProject_Add(external_zlib_32
-      URL ${ZLIB_URI}
-      CMAKE_GENERATOR ${GENERATOR_32}
-      URL_HASH MD5=${ZLIB_HASH}
-      DOWNLOAD_DIR ${DOWNLOAD_DIR}
-      PREFIX ${BUILD_DIR}/zlib32
-      CMAKE_ARGS -DCMAKE_INSTALL_PREFIX=${LIBDIR}/zlib32 ${DEFAULT_CMAKE_FLAGS}
-      INSTALL_DIR ${LIBDIR}/zlib32
-    )
-
-    ExternalProject_Add(external_zlib_64
-      URL ${ZLIB_URI}
-      CMAKE_GENERATOR ${GENERATOR_64}
-      URL_HASH MD5=${ZLIB_HASH}
-      DOWNLOAD_DIR ${DOWNLOAD_DIR}
-      PREFIX ${BUILD_DIR}/zlib64
-      CMAKE_ARGS -DCMAKE_INSTALL_PREFIX=${LIBDIR}/zlib64 ${DEFAULT_CMAKE_FLAGS}
-      INSTALL_DIR ${LIBDIR}/zlib64
-    )
-
-    ExternalProject_Add(external_blendthumb_32
-      CMAKE_GENERATOR ${GENERATOR_32}
-      SOURCE_DIR ${THUMB_DIR}
-      PREFIX ${BUILD_DIR}/blendthumb32
-      CMAKE_ARGS -DCMAKE_INSTALL_PREFIX=${LIBDIR}/blendThumb32 ${DEFAULT_CMAKE_FLAGS} -DZLIB_INCLUDE=${LIBDIR}/zlib32/include -DZLIB_LIBS=${LIBDIR}/zlib32/lib/zlibstatic.lib
-      INSTALL_DIR ${LIBDIR}/blendthumb32
-    )
-    add_dependencies(
-      external_blendthumb_32
-      external_zlib_32
-    )
-
-    ExternalProject_Add(external_blendthumb_64
-      CMAKE_GENERATOR ${GENERATOR_64}
-      SOURCE_DIR ${THUMB_DIR}
-      PREFIX ${BUILD_DIR}/blendthumb64
-      CMAKE_ARGS -DCMAKE_INSTALL_PREFIX=${LIBDIR}/blendThumb64 ${DEFAULT_CMAKE_FLAGS} -DZLIB_INCLUDE=${LIBDIR}/zlib64/include -DZLIB_LIBS=${LIBDIR}/zlib64/lib/zlibstatic.lib
-      INSTALL_DIR ${LIBDIR}/blendthumb64
-    )
-    add_dependencies(
-      external_blendthumb_64
-      external_zlib_64
-    )
-  endif()
-endif()

build_files/build_environment/cmake/boost.cmake

@@ -33,19 +33,9 @@ if(WIN32)
     set(BOOST_TOOLSET toolset=msvc-14.0)
     set(BOOST_COMPILER_STRING -vc140)
   endif()
-  set(JAM_FILE ${BUILD_DIR}/boost/src/external_boost/user-config.jam)
-  set(semi_path "${PATCH_DIR}/semi.txt")
-  FILE(TO_NATIVE_PATH ${semi_path} semi_path)
-  set(BOOST_CONFIGURE_COMMAND bootstrap.bat &&
-                echo using python : ${PYTHON_OUTPUTDIR}\\python.exe > "${JAM_FILE}" &&
-                echo.   : ${BUILD_DIR}/python/src/external_python/include ${BUILD_DIR}/python/src/external_python/pc >> "${JAM_FILE}" &&
-                echo.   : ${BUILD_DIR}/python/src/external_python/pcbuild >> "${JAM_FILE}" &&
-                type ${semi_path} >> "${JAM_FILE}"
-  )
+  set(BOOST_CONFIGURE_COMMAND bootstrap.bat)
   set(BOOST_BUILD_COMMAND bjam)
-  #--user-config=user-config.jam
   set(BOOST_BUILD_OPTIONS runtime-link=static )
-  #set(BOOST_WITH_PYTHON --with-python)
   set(BOOST_HARVEST_CMD   ${CMAKE_COMMAND} -E copy_directory ${LIBDIR}/boost/lib/ ${HARVEST_TARGET}/boost/lib/ )
   if(BUILD_MODE STREQUAL Release)
     set(BOOST_HARVEST_CMD ${BOOST_HARVEST_CMD} && ${CMAKE_COMMAND} -E copy_directory ${LIBDIR}/boost/include/boost-1_68/ ${HARVEST_TARGET}/boost/include/)
@@ -82,7 +72,6 @@ set(BOOST_OPTIONS
   --with-serialization
   --with-program_options
   --with-iostreams
-  ${BOOST_WITH_PYTHON}
   ${BOOST_TOOLSET}
 )
 
@@ -100,10 +89,3 @@ ExternalProject_Add(external_boost
   BUILD_IN_SOURCE 1
   INSTALL_COMMAND "${BOOST_HARVEST_CMD}"
 )
-
-if(WIN32)
-  add_dependencies(
-    external_boost
-    Make_Python_Environment
-  )
-endif()

build_files/build_environment/cmake/check_software.cmake

@@ -0,0 +1,53 @@
+# ***** BEGIN GPL LICENSE BLOCK *****
+#
+# This program is free software; you can redistribute it and/or
+# modify it under the terms of the GNU General Public License
+# as published by the Free Software Foundation; either version 2
+# of the License, or (at your option) any later version.
+#
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program; if not, write to the Free Software Foundation,
+# Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
+#
+# ***** END GPL LICENSE BLOCK *****
+
+if(UNIX)
+  set(_required_software
+    autoconf
+    automake
+    libtoolize
+    nasm
+    yasm
+    tclsh
+  )
+
+  foreach(_software ${_required_software})
+    find_program(_software_find NAMES ${_software})
+    if(NOT _software_find)
+      set(_software_missing "${_software_missing}${_software} ")
+    endif()
+    unset(_software_find CACHE)
+  endforeach()
+
+  if(_software_missing)
+    message(
+      "\n"
+      "Missing software for building Blender dependencies:\n"
+      "  ${_software_missing}\n"
+      "\n"
+      "On Debian and Ubuntu:\n"
+      "  apt install autoconf automake libtool yasm nasm tcl\n"
+      "\n"
+      "On macOS (with homebrew):\n"
+      "  brew install cmake autoconf automake libtool yasm nasm\n"
+      "\n"
+      "Other platforms:\n"
+      "  Install equivalent packages.\n")
+    message(FATAL_ERROR "Install missing software before continuing")
+  endif()
+endif()

build_files/build_environment/cmake/harvest.cmake

@@ -51,9 +51,6 @@ if(BUILD_MODE STREQUAL Release)
         # tiff
         ${CMAKE_COMMAND} -E copy ${LIBDIR}/tiff/lib/tiff.lib ${HARVEST_TARGET}/tiff/lib/libtiff.lib &&
         ${CMAKE_COMMAND} -E copy_directory ${LIBDIR}/tiff/include/ ${HARVEST_TARGET}/tiff/include/ &&
-        # BlendThumb
-        ${CMAKE_COMMAND} -E copy ${LIBDIR}/BlendThumb64/bin/blendthumb.dll ${HARVEST_TARGET}/ThumbHandler/lib/BlendThumb64.dll &&
-        ${CMAKE_COMMAND} -E copy ${LIBDIR}/BlendThumb32/bin/blendthumb.dll ${HARVEST_TARGET}/ThumbHandler/lib/BlendThumb.dll &&
         # hidapi
         ${CMAKE_COMMAND} -E copy_directory ${LIBDIR}/hidapi/ ${HARVEST_TARGET}/hidapi/ &&
         # webp, straight up copy
@@ -166,6 +163,8 @@ harvest(openimageio/bin openimageio/bin "maketx")
 harvest(openimageio/bin openimageio/bin "oiiotool")
 harvest(openimageio/include openimageio/include "*")
 harvest(openimageio/lib openimageio/lib "*.a")
+harvest(openimagedenoise/include openimagedenoise/include "*")
+harvest(openimagedenoise/lib openimagedenoise/lib "*.a")
 harvest(openjpeg/include/openjpeg-2.3 openjpeg/include "*.h")
 harvest(openjpeg/lib openjpeg/lib "*.a")
 harvest(opensubdiv/include opensubdiv/include "*.h")

build_files/build_environment/cmake/numpy.cmake

@@ -17,6 +17,7 @@
 # ***** END GPL LICENSE BLOCK *****
 
 if(MSVC)
+  message("BIN >${PYTHON_BINARY}<")
   if(BUILD_MODE STREQUAL Debug)
     set(NUMPY_DIR_POSTFIX -pydebug)
     set(NUMPY_ARCHIVE_POSTFIX d)
@@ -30,17 +31,6 @@ endif()
 
 set(NUMPY_POSTFIX)
 
-if(WIN32)
-  set(NUMPY_INSTALL
-    ${CMAKE_COMMAND} -E copy_directory "${BUILD_DIR}/python/src/external_python/run/lib/site-packages/numpy/core/include/numpy" "${LIBDIR}/python/include/python${PYTHON_SHORT_VERSION}/numpy" &&
-    ${CMAKE_COMMAND} -E chdir "${BUILD_DIR}/numpy/src/external_numpy/build/lib.${PYTHON_ARCH2}-${PYTHON_SHORT_VERSION}${NUMPY_DIR_POSTFIX}"
-    ${CMAKE_COMMAND} -E tar "cfvz" "${LIBDIR}/python${PYTHON_SHORT_VERSION_NO_DOTS}_numpy_${NUMPY_SHORT_VERSION}${NUMPY_ARCHIVE_POSTFIX}.tar.gz" "."
-  )
-else()
-  set(NUMPY_INSTALL echo .)
-  set(NUMPY_PATCH echo .)
-endif()
-
 ExternalProject_Add(external_numpy
   URL ${NUMPY_URI}
   DOWNLOAD_DIR ${DOWNLOAD_DIR}
@@ -50,17 +40,10 @@ ExternalProject_Add(external_numpy
   CONFIGURE_COMMAND ""
   LOG_BUILD 1
   BUILD_COMMAND ${PYTHON_BINARY} ${BUILD_DIR}/numpy/src/external_numpy/setup.py build ${NUMPY_BUILD_OPTION} install --old-and-unmanageable
-  INSTALL_COMMAND ${NUMPY_INSTALL}
+  INSTALL_COMMAND ""
 )
 
-if(WIN32)
-  ExternalProject_Add_Step(external_numpy after_install
-      COMMAND ${CMAKE_COMMAND} -E copy ${LIBDIR}/python${PYTHON_SHORT_VERSION_NO_DOTS}_numpy_${NUMPY_SHORT_VERSION}${NUMPY_ARCHIVE_POSTFIX}.tar.gz ${HARVEST_TARGET}/Release/python${PYTHON_SHORT_VERSION_NO_DOTS}_numpy_${NUMPY_SHORT_VERSION}${NUMPY_ARCHIVE_POSTFIX}.tar.gz
-      DEPENDEES install
-    )
-endif()
-
 add_dependencies(
   external_numpy
-  Make_Python_Environment
+  external_python
 )

build_files/build_environment/cmake/openimagedenoise.cmake

@@ -0,0 +1,61 @@
+# ***** BEGIN GPL LICENSE BLOCK *****
+#
+# This program is free software; you can redistribute it and/or
+# modify it under the terms of the GNU General Public License
+# as published by the Free Software Foundation; either version 2
+# of the License, or (at your option) any later version.
+#
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program; if not, write to the Free Software Foundation,
+# Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
+#
+# ***** END GPL LICENSE BLOCK *****
+
+
+set(OIDN_EXTRA_ARGS
+  -DWITH_EXAMPLE=OFF
+  -DWITH_TEST=OFF
+  -DTBB_ROOT=${LIBDIR}/tbb
+  -DTBB_STATIC_LIB=ON
+  -DOIDN_STATIC_LIB=ON
+)
+
+ExternalProject_Add(external_openimagedenoise
+  URL ${OIDN_URI}
+  DOWNLOAD_DIR ${DOWNLOAD_DIR}
+  URL_HASH MD5=${OIDN_HASH}
+  PREFIX ${BUILD_DIR}/openimagedenoise
+  CMAKE_ARGS -DCMAKE_INSTALL_PREFIX=${LIBDIR}/openimagedenoise ${DEFAULT_CMAKE_FLAGS} ${OIDN_EXTRA_ARGS}
+  PATCH_COMMAND ${PATCH_CMD} --verbose -p 1 -N -d ${BUILD_DIR}/openimagedenoise/src/external_openimagedenoise < ${PATCH_DIR}/openimagedenoise.diff
+  INSTALL_DIR ${LIBDIR}/openimagedenoise
+)
+
+add_dependencies(
+  external_openimagedenoise
+  external_tbb
+)
+
+if(WIN32)
+  if(BUILD_MODE STREQUAL Release)
+    ExternalProject_Add_Step(external_openimagedenoise after_install
+      COMMAND ${CMAKE_COMMAND} -E copy_directory ${LIBDIR}/openimagedenoise/include ${HARVEST_TARGET}/openimagedenoise/include
+      COMMAND ${CMAKE_COMMAND} -E copy ${LIBDIR}/openimagedenoise/lib/openimagedenoise.lib ${HARVEST_TARGET}/openimagedenoise/lib/openimagedenoise.lib
+      COMMAND ${CMAKE_COMMAND} -E copy ${LIBDIR}/openimagedenoise/lib/common.lib ${HARVEST_TARGET}/openimagedenoise/lib/common.lib
+      COMMAND ${CMAKE_COMMAND} -E copy ${LIBDIR}/openimagedenoise/lib/mkldnn.lib ${HARVEST_TARGET}/openimagedenoise/lib/mkldnn.lib
+      DEPENDEES install
+    )
+  endif()
+  if(BUILD_MODE STREQUAL Debug)
+    ExternalProject_Add_Step(external_openimagedenoise after_install
+      COMMAND ${CMAKE_COMMAND} -E copy ${LIBDIR}/openimagedenoise/lib/openimagedenoise.lib ${HARVEST_TARGET}/openimagedenoise/lib/openimagedenoise_d.lib
+      COMMAND ${CMAKE_COMMAND} -E copy ${LIBDIR}/openimagedenoise/lib/common.lib ${HARVEST_TARGET}/openimagedenoise/lib/common_d.lib
+      COMMAND ${CMAKE_COMMAND} -E copy ${LIBDIR}/openimagedenoise/lib/mkldnn.lib ${HARVEST_TARGET}/openimagedenoise/lib/mkldnn_d.lib
+      DEPENDEES install
+    )
+  endif()
+endif()

build_files/build_environment/cmake/osl.cmake

@@ -87,6 +87,7 @@ elseif(APPLE)
   set(OSL_EXTRA_ARGS
     ${OSL_EXTRA_ARGS}
     -DHIDE_SYMBOLS=OFF
+    -DPUGIXML_HOME=${LIBDIR}/pugixml
   )
 endif()
 

build_files/build_environment/cmake/package_python.cmake

@@ -0,0 +1,58 @@
+# ***** BEGIN GPL LICENSE BLOCK *****
+#
+# This program is free software; you can redistribute it and/or
+# modify it under the terms of the GNU General Public License
+# as published by the Free Software Foundation; either version 2
+# of the License, or (at your option) any later version.
+#
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program; if not, write to the Free Software Foundation,
+# Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
+#
+# ***** END GPL LICENSE BLOCK *****
+
+if(MSVC)
+  set(PYTARGET ${HARVEST_TARGET}/python/${PYTHON_SHORT_VERSION_NO_DOTS})
+  set(PYSRC ${LIBDIR}/python/)
+
+  if(BUILD_MODE STREQUAL Release)
+    add_custom_command(
+      OUTPUT ${PYTARGET}/bin/python${PYTHON_POSTFIX}.exe
+      COMMAND echo packaging python
+      COMMAND echo this should ouput at ${PYTARGET}/bin/python${PYTHON_POSTFIX}.exe
+      COMMAND ${CMAKE_COMMAND} -E make_directory ${PYTARGET}/libs
+      COMMAND ${CMAKE_COMMAND} -E copy ${PYSRC}/libs/python${PYTHON_SHORT_VERSION_NO_DOTS}.lib ${PYTARGET}/libs/python${PYTHON_SHORT_VERSION_NO_DOTS}.lib
+      COMMAND ${CMAKE_COMMAND} -E copy ${PYSRC}/python.exe ${PYTARGET}/bin/python.exe
+      COMMAND ${CMAKE_COMMAND} -E copy ${PYSRC}/python${PYTHON_SHORT_VERSION_NO_DOTS}.dll ${PYTARGET}/bin/python${PYTHON_SHORT_VERSION_NO_DOTS}.dll
+      COMMAND ${CMAKE_COMMAND} -E copy ${PYSRC}/python${PYTHON_SHORT_VERSION_NO_DOTS}.pdb ${PYTARGET}/libs/python${PYTHON_SHORT_VERSION_NO_DOTS}.pdb
+      COMMAND ${CMAKE_COMMAND} -E copy_directory ${PYSRC}/include/ ${PYTARGET}/include/
+      COMMAND ${CMAKE_COMMAND} -E copy_directory ${PYSRC}/lib/ ${PYTARGET}/lib/
+      COMMAND ${CMAKE_COMMAND} -E copy_directory ${PYSRC}/DLLs/ ${PYTARGET}/DLLs/
+      COMMAND cd ${PYTARGET}/lib/ && for /d /r . %%d in (__pycache__) do @if exist "%%d" echo "%%d" && rd /s/q "%%d"
+    )
+    add_custom_target(Package_Python ALL DEPENDS external_python external_numpy external_python_site_packages OUTPUT ${HARVEST_TARGET}/python/${PYTHON_SHORT_VERSION_NO_DOTS}/bin/python${PYTHON_POSTFIX}.exe)
+  endif()
+
+  if(BUILD_MODE STREQUAL Debug)
+    add_custom_command(
+      OUTPUT ${PYTARGET}/bin/python${PYTHON_POSTFIX}.exe
+      COMMAND echo packaging python
+      COMMAND echo this should ouput at ${PYTARGET}/bin/python${PYTHON_POSTFIX}.exe
+      COMMAND ${CMAKE_COMMAND} -E make_directory ${PYTARGET}/libs
+      COMMAND ${CMAKE_COMMAND} -E copy ${PYSRC}/libs/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.lib ${PYTARGET}/libs/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.lib
+      COMMAND ${CMAKE_COMMAND} -E copy ${PYSRC}/python${PYTHON_POSTFIX}.exe ${PYTARGET}/bin/python${PYTHON_POSTFIX}.exe
+      COMMAND ${CMAKE_COMMAND} -E copy ${PYSRC}/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.dll ${PYTARGET}/bin/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.dll
+      COMMAND ${CMAKE_COMMAND} -E copy ${PYSRC}/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.pdb ${PYTARGET}/libs/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.pdb
+      COMMAND ${CMAKE_COMMAND} -E copy_directory ${PYSRC}/include/ ${PYTARGET}/include/
+      COMMAND ${CMAKE_COMMAND} -E copy_directory ${PYSRC}/lib/ ${PYTARGET}/lib/
+      COMMAND ${CMAKE_COMMAND} -E copy_directory ${PYSRC}/DLLs/ ${PYTARGET}/DLLs/
+      COMMAND cd ${PYTARGET}/lib/ && for /d /r . %%d in (__pycache__) do @if exist "%%d" echo "%%d" && rd /s/q "%%d"
+    )
+    add_custom_target(Package_Python ALL DEPENDS external_python external_numpy external_python_site_packages OUTPUT ${PYTARGET}/bin/python${PYTHON_POSTFIX}.exe)
+  endif()
+endif()

build_files/build_environment/cmake/python.cmake

@@ -19,17 +19,13 @@
 set(PYTHON_POSTFIX)
 if(BUILD_MODE STREQUAL Debug)
   set(PYTHON_POSTFIX _d)
+  set(PYTHON_EXTRA_INSTLAL_FLAGS -d)
 endif()
 
 if(WIN32)
-  if("${CMAKE_SIZEOF_VOID_P}" EQUAL "8")
-    set(SSL_POSTFIX -x64)
-  else()
-    set(SSL_POSTFIX)
-  endif()
-
-  set(PYTHON_BINARY ${BUILD_DIR}/python/src/external_python/run/python${PYTHON_POSTFIX}.exe)
-
+  set(PYTHON_BINARY_INTERNAL ${BUILD_DIR}/python/src/external_python/PCBuild/amd64/python${PYTHON_POSTFIX}.exe)
+  set(PYTHON_BINARY ${LIBDIR}/python/python${PYTHON_POSTFIX}.exe)
+  set(PYTHON_SRC ${BUILD_DIR}/python/src/external_python/)
   macro(cmake_to_dos_path MsysPath ResultingPath)
     string(REPLACE "/" "\\" ${ResultingPath} "${MsysPath}")
   endmacro()
@@ -40,31 +36,16 @@ if(WIN32)
   cmake_to_dos_path(${PYTHON_EXTERNALS_FOLDER} PYTHON_EXTERNALS_FOLDER_DOS)
   cmake_to_dos_path(${DOWNLOADS_EXTERNALS_FOLDER} DOWNLOADS_EXTERNALS_FOLDER_DOS)
 
-  message("Python externals = ${PYTHON_EXTERNALS_FOLDER}")
-  message("Python externals_dos = ${PYTHON_EXTERNALS_FOLDER_DOS}")
-  message("Python DOWNLOADS_EXTERNALS_FOLDER = ${DOWNLOADS_EXTERNALS_FOLDER}")
-  message("Python DOWNLOADS_EXTERNALS_FOLDER_DOS = ${DOWNLOADS_EXTERNALS_FOLDER_DOS}")
-
   ExternalProject_Add(external_python
     URL ${PYTHON_URI}
     DOWNLOAD_DIR ${DOWNLOAD_DIR}
     URL_HASH MD5=${PYTHON_HASH}
     PREFIX ${BUILD_DIR}/python
-    PATCH_COMMAND
-      echo mklink /D "${PYTHON_EXTERNALS_FOLDER_DOS}" "${DOWNLOADS_EXTERNALS_FOLDER_DOS}" &&
-      mklink /D "${PYTHON_EXTERNALS_FOLDER_DOS}" "${DOWNLOADS_EXTERNALS_FOLDER_DOS}"
     CONFIGURE_COMMAND ""
     BUILD_COMMAND cd ${BUILD_DIR}/python/src/external_python/pcbuild/ && set IncludeTkinter=false && call build.bat -e -p ${PYTHON_ARCH} -c ${BUILD_MODE}
-    INSTALL_COMMAND COMMAND
-      ${CMAKE_COMMAND} -E copy ${PYTHON_OUTPUTDIR}/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.dll ${LIBDIR}/python/lib/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.dll &&
-      ${CMAKE_COMMAND} -E copy ${PYTHON_OUTPUTDIR}/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.pdb ${LIBDIR}/python/lib/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.pdb &&
-      ${CMAKE_COMMAND} -E copy ${PYTHON_OUTPUTDIR}/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.lib ${LIBDIR}/python/lib/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.lib &&
-      ${CMAKE_COMMAND} -E copy ${PYTHON_OUTPUTDIR}/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.exp ${LIBDIR}/python/lib/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.exp &&
-      ${CMAKE_COMMAND} -E copy_directory ${BUILD_DIR}/python/src/external_python/include ${LIBDIR}/python/include/Python${PYTHON_SHORT_VERSION} &&
-      ${CMAKE_COMMAND} -E copy "${BUILD_DIR}/python/src/external_python/PC/pyconfig.h" ${LIBDIR}/python/include/Python${PYTHON_SHORT_VERSION}/pyconfig.h
+    INSTALL_COMMAND ${PYTHON_BINARY_INTERNAL} ${PYTHON_SRC}/PC/layout/main.py -b ${PYTHON_SRC}/PCbuild/amd64 -s ${PYTHON_SRC} -t ${PYTHON_SRC}/tmp/  --include-underpth --include-stable --include-pip --include-dev --include-launchers  --include-symbols ${PYTHON_EXTRA_INSTLAL_FLAGS} --copy ${LIBDIR}/python
   )
-  message("PythinRedist = ${BUILD_DIR}/python/src/external_python/redist")
-  message("POutput = ${PYTHON_OUTPUTDIR}")
+
 else()
   if(APPLE)
     # disable functions that can be in 10.13 sdk but aren't available on 10.9 target
@@ -107,65 +88,6 @@ else()
     BUILD_COMMAND ${PYTHON_CONFIGURE_ENV} && cd ${BUILD_DIR}/python/src/external_python/ && make -j${MAKE_THREADS}
     INSTALL_COMMAND ${PYTHON_CONFIGURE_ENV} && cd ${BUILD_DIR}/python/src/external_python/ && make install
     INSTALL_DIR ${LIBDIR}/python)
-
-  add_custom_target(Make_Python_Environment ALL DEPENDS external_python)
-endif()
-
-if(MSVC)
-  add_custom_command(
-    OUTPUT ${LIBDIR}/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.tar.gz
-    OUTPUT ${BUILD_DIR}/python/src/external_python/redist/bin/python${PYTHON_POSTFIX}.exe
-    COMMAND ${CMAKE_COMMAND} -E copy_directory ${BUILD_DIR}/python/src/external_python/lib ${BUILD_DIR}/python/src/external_python/redist/lib
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_asyncio${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_asyncio${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_bz2${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_bz2${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_contextvars${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_contextvars${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_ctypes${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_ctypes${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_ctypes_test${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_ctypes_test${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_decimal${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_decimal${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_distutils_findvs${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_distutils_findvs${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_elementtree${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_elementtree${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_hashlib${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_hashlib${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_lzma${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_lzma${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_msi${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_msi${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_multiprocessing${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_multiprocessing${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_overlapped${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_overlapped${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_queue${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_queue${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_socket${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_socket${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_sqlite3${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_sqlite3${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_ssl${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_ssl${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_testbuffer${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_testbuffer${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_testcapi${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_testcapi${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_testimportmultiple${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_testimportmultiple${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/_testmultiphase${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/_testmultiphase${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/pyexpat${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/pyexpat${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/python${PYTHON_POSTFIX}.exe" ${BUILD_DIR}/python/src/external_python/redist/bin/python${PYTHON_POSTFIX}.exe
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/select${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/select${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/unicodedata${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/unicodedata${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/winsound${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/winsound${PYTHON_POSTFIX}.pyd
-    #xxlimited is an example extension module, we don't need to ship it and debug doesn't build it
-    #leaving it commented out, so I won't get confused again with the next update.
-    #COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/xxlimited${PYTHON_POSTFIX}.pyd" ${BUILD_DIR}/python/src/external_python/redist/lib/xxlimited${PYTHON_POSTFIX}.pyd
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/libssl-1_1${SSL_POSTFIX}.dll" ${BUILD_DIR}/python/src/external_python/redist/lib/libssl-1_1${SSL_POSTFIX}.dll
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/libcrypto-1_1${SSL_POSTFIX}.dll" ${BUILD_DIR}/python/src/external_python/redist/lib/libcrypto-1_1${SSL_POSTFIX}.dll
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/sqlite3${PYTHON_POSTFIX}.dll" ${BUILD_DIR}/python/src/external_python/redist/lib/sqlite3${PYTHON_POSTFIX}.dll
-    COMMAND ${CMAKE_COMMAND} -E chdir "${BUILD_DIR}/python/src/external_python/redist" ${CMAKE_COMMAND} -E tar "cfvz" "${LIBDIR}/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.tar.gz" "."
-    COMMAND ${CMAKE_COMMAND} -E copy_directory ${LIBDIR}/python/ ${HARVEST_TARGET}/python/
-    COMMAND ${CMAKE_COMMAND} -E copy ${LIBDIR}/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.tar.gz ${HARVEST_TARGET}/Release/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.tar.gz
-  )
-
-  add_custom_target(Package_Python ALL DEPENDS external_python ${LIBDIR}/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.tar.gz ${BUILD_DIR}/python/src/external_python/redist/bin/python${PYTHON_POSTFIX}.exe)
-
-  add_custom_command(OUTPUT ${BUILD_DIR}/python/src/external_python/run/python${PYTHON_POSTFIX}.exe
-    COMMAND ${CMAKE_COMMAND} -E copy_directory ${BUILD_DIR}/python/src/external_python/redist ${BUILD_DIR}/python/src/external_python/run
-    COMMAND ${CMAKE_COMMAND} -E copy_directory ${BUILD_DIR}/python/src/external_python/include ${BUILD_DIR}/python/src/external_python/run/include
-    COMMAND ${CMAKE_COMMAND} -E copy "${BUILD_DIR}/python/src/external_python/PC/pyconfig.h" ${BUILD_DIR}/python/src/external_python/run/include/pyconfig.h
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.dll" ${BUILD_DIR}/python/src/external_python/run/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.dll
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.lib" ${BUILD_DIR}/python/src/external_python/run/libs/python${PYTHON_SHORT_VERSION_NO_DOTS}.lib  #missing postfix on purpose, distutils is not expecting it
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.lib" ${BUILD_DIR}/python/src/external_python/run/libs/python${PYTHON_SHORT_VERSION_NO_DOTS}${PYTHON_POSTFIX}.lib  #other things like numpy still want it though.
-    COMMAND ${CMAKE_COMMAND} -E copy "${PYTHON_OUTPUTDIR}/python${PYTHON_POSTFIX}.exe" ${BUILD_DIR}/python/src/external_python/run/python${PYTHON_POSTFIX}.exe
-    COMMAND ${BUILD_DIR}/python/src/external_python/run/python${PYTHON_POSTFIX}.exe -m ensurepip --upgrade
-  )
-  add_custom_target(Make_Python_Environment ALL DEPENDS ${BUILD_DIR}/python/src/external_python/run/python${PYTHON_POSTFIX}.exe Package_Python)
 endif()
 
 if(UNIX)

build_files/build_environment/cmake/python_site_packages.cmake

@@ -15,27 +15,16 @@
 # Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
 #
 # ***** END GPL LICENSE BLOCK *****
-if(WIN32)
-  set(HARVEST_CMD cmd /C FOR /d /r ${BUILD_DIR}/python/src/external_python/run/lib/site-packages %d IN (__pycache__) DO @IF EXIST "%d" rd /s /q "%d" &&
-    ${CMAKE_COMMAND} -E copy_directory  ${BUILD_DIR}/python/src/external_python/run/lib/site-packages/idna ${HARVEST_TARGET}/Release/site-packages/idna &&
-    ${CMAKE_COMMAND} -E copy_directory  ${BUILD_DIR}/python/src/external_python/run/lib/site-packages/chardet ${HARVEST_TARGET}/Release/site-packages/chardet &&
-    ${CMAKE_COMMAND} -E copy_directory  ${BUILD_DIR}/python/src/external_python/run/lib/site-packages/urllib3 ${HARVEST_TARGET}/Release/site-packages/urllib3 &&
-    ${CMAKE_COMMAND} -E copy_directory  ${BUILD_DIR}/python/src/external_python/run/lib/site-packages/certifi ${HARVEST_TARGET}/Release/site-packages/certifi &&
-    ${CMAKE_COMMAND} -E copy_directory  ${BUILD_DIR}/python/src/external_python/run/lib/site-packages/requests ${HARVEST_TARGET}/Release/site-packages/requests
-  )
-else()
-  set(HARVEST_CMD echo .)
-endif()
 
 ExternalProject_Add(external_python_site_packages
   DOWNLOAD_COMMAND ""
   CONFIGURE_COMMAND ""
   BUILD_COMMAND ""
   PREFIX ${BUILD_DIR}/site_packages
-  INSTALL_COMMAND ${PYTHON_BINARY} -m pip install idna==${IDNA_VERSION} chardet==${CHARDET_VERSION} urllib3==${URLLIB3_VERSION} certifi==${CERTIFI_VERSION} requests==${REQUESTS_VERSION} --no-binary :all: && ${HARVEST_CMD}
+  INSTALL_COMMAND ${PYTHON_BINARY} -m pip install idna==${IDNA_VERSION} chardet==${CHARDET_VERSION} urllib3==${URLLIB3_VERSION} certifi==${CERTIFI_VERSION} requests==${REQUESTS_VERSION} --no-binary :all:
 )
 
 add_dependencies(
   external_python_site_packages
-  Make_Python_Environment
+  external_python
 )

build_files/build_environment/cmake/tbb.cmake

@@ -18,7 +18,7 @@
 
 set(TBB_EXTRA_ARGS
   -DTBB_BUILD_SHARED=Off
-  -DTBB_BUILD_TBBMALLOC=Off
+  -DTBB_BUILD_TBBMALLOC=On
   -DTBB_BUILD_TBBMALLOC_PROXY=Off
   -DTBB_BUILD_STATIC=On
 )

build_files/build_environment/cmake/versions.cmake

@@ -157,16 +157,16 @@ set(OPENVDB_VERSION 5.1.0)
 set(OPENVDB_URI https://github.com/dreamworksanimation/openvdb/archive/v${OPENVDB_VERSION}.tar.gz)
 set(OPENVDB_HASH 5310101f874dcfd2165f9cee68c22624)
 
-set(IDNA_VERSION 2.7)
+set(IDNA_VERSION 2.8)
 set(CHARDET_VERSION 3.0.4)
-set(URLLIB3_VERSION 1.23)
-set(CERTIFI_VERSION 2018.8.13)
-set(REQUESTS_VERSION 2.19.1)
+set(URLLIB3_VERSION 1.25.3)
+set(CERTIFI_VERSION 2019.6.16)
+set(REQUESTS_VERSION 2.22.0)
 
-set(NUMPY_VERSION v1.15.0)
-set(NUMPY_SHORT_VERSION 1.15)
-set(NUMPY_URI https://files.pythonhosted.org/packages/3a/20/c81632328b1a4e1db65f45c0a1350a9c5341fd4bbb8ea66cdd98da56fe2e/numpy-1.15.0.zip)
-set(NUMPY_HASH 20e13185089011116a98e11c9bf8aa07)
+set(NUMPY_VERSION v1.17.0)
+set(NUMPY_SHORT_VERSION 1.17)
+set(NUMPY_URI https://files.pythonhosted.org/packages/da/32/1b8f2bb5fb50e4db68543eb85ce37b9fa6660cd05b58bddfafafa7ed62da/numpy-1.17.0.zip)
+set(NUMPY_HASH aed49b31bcb44ec73b8155be78566135)
 
 set(LAME_VERSION 3.100)
 set(LAME_URI http://downloads.sourceforge.net/project/lame/lame/3.100/lame-${LAME_VERSION}.tar.gz)
@@ -302,3 +302,7 @@ set(SQLITE_HASH fb558c49ee21a837713c4f1e7e413309aabdd9c7)
 set(EMBREE_VERSION 3.2.4)
 set(EMBREE_URI https://github.com/embree/embree/archive/v${EMBREE_VERSION}.zip)
 set(EMBREE_HASH 3d4a1147002ff43939d45140aa9d6fb8)
+
+set(OIDN_VERSION 1.0.0)
+set(OIDN_URI https://github.com/OpenImageDenoise/oidn/releases/download/v${OIDN_VERSION}/oidn-${OIDN_VERSION}.src.zip)
+set(OIDN_HASH 19fe67b0164e8f020ac8a4f520defe60)

build_files/build_environment/install_deps.sh

@@ -26,17 +26,17 @@ ARGS=$( \
 getopt \
 -o s:i:t:h \
 --long source:,install:,tmp:,info:,threads:,help,show-deps,no-sudo,no-build,no-confirm,\
-with-all,with-opencollada,with-jack,with-embree,\
+with-all,with-opencollada,with-jack,with-embree,with-oidn,\
 ver-ocio:,ver-oiio:,ver-llvm:,ver-osl:,ver-osd:,ver-openvdb:,\
 force-all,force-python,force-numpy,force-boost,\
 force-ocio,force-openexr,force-oiio,force-llvm,force-osl,force-osd,force-openvdb,\
-force-ffmpeg,force-opencollada,force-alembic,force-embree,\
+force-ffmpeg,force-opencollada,force-alembic,force-embree,force-oidn,\
 build-all,build-python,build-numpy,build-boost,\
 build-ocio,build-openexr,build-oiio,build-llvm,build-osl,build-osd,build-openvdb,\
-build-ffmpeg,build-opencollada,build-alembic,build-embree,\
+build-ffmpeg,build-opencollada,build-alembic,build-embree,build-oidn,\
 skip-python,skip-numpy,skip-boost,\
 skip-ocio,skip-openexr,skip-oiio,skip-llvm,skip-osl,skip-osd,skip-openvdb,\
-skip-ffmpeg,skip-opencollada,skip-alembic,skip-embree \
+skip-ffmpeg,skip-opencollada,skip-alembic,skip-embree,skip-oidn \
 -- "$@" \
 )
 
@@ -57,6 +57,7 @@ WITH_ALL=false
 # Do not yet enable opencollada or embree, use --with-opencollada/--with-embree (or --with-all) option to try it.
 WITH_OPENCOLLADA=false
 WITH_EMBREE=false
+WITH_OIDN=false
 
 THREADS=$(nproc)
 
@@ -69,6 +70,7 @@ Number of threads for building: \$THREADS (automatically detected, use --threads
 Full install: \$WITH_ALL (use --with-all option to enable it).
 Building OpenCOLLADA: \$WITH_OPENCOLLADA (use --with-opencollada option to enable it).
 Building Embree: \$WITH_EMBREE (use --with-embree option to enable it).
+Building OpenImageDenoise: \$WITH_OIDN (use --with-oidn option to enable it).
 
 Example:
 Full install without OpenCOLLADA: --with-all --skip-opencollada
@@ -118,6 +120,9 @@ ARGUMENTS_INFO="\"COMMAND LINE ARGUMENTS:
     --with-embree
         Build and install the Embree libraries.
 
+    --with-oidn
+        Build and install the OpenImageDenoise libraries.
+
     --with-jack
         Install the jack libraries.
 
@@ -185,6 +190,9 @@ ARGUMENTS_INFO="\"COMMAND LINE ARGUMENTS:
     --build-embree
         Force the build of Embree.
 
+    --build-oidn
+        Force the build of OpenImageDenoise.
+
     --build-ffmpeg
         Force the build of FFMpeg.
 
@@ -240,6 +248,9 @@ ARGUMENTS_INFO="\"COMMAND LINE ARGUMENTS:
     --force-embree
         Force the rebuild of Embree.
 
+    --force-oidn
+        Force the rebuild of OpenImageDenoise.
+
     --force-ffmpeg
         Force the rebuild of FFMpeg.
 
@@ -288,6 +299,9 @@ ARGUMENTS_INFO="\"COMMAND LINE ARGUMENTS:
     --skip-Embree
         Unconditionally skip Embree installation/building.
 
+    --skip-oidn
+        Unconditionally skip OpenImageDenoise installation/building.
+
     --skip-ffmpeg
         Unconditionally skip FFMpeg installation/building.\""
 
@@ -309,7 +323,7 @@ PYTHON_FORCE_BUILD=false
 PYTHON_FORCE_REBUILD=false
 PYTHON_SKIP=false
 
-NUMPY_VERSION="1.15.0"
+NUMPY_VERSION="1.17.0"
 NUMPY_VERSION_MIN="1.8"
 NUMPY_FORCE_BUILD=false
 NUMPY_FORCE_REBUILD=false
@@ -390,6 +404,11 @@ EMBREE_FORCE_BUILD=false
 EMBREE_FORCE_REBUILD=false
 EMBREE_SKIP=false
 
+OIDN_VERSION="1.0.0"
+OIDN_FORCE_BUILD=false
+OIDN_FORCE_REBUILD=false
+OIDN_SKIP=false
+
 FFMPEG_VERSION="4.0.2"
 FFMPEG_VERSION_MIN="2.8.4"
 FFMPEG_FORCE_BUILD=false
@@ -526,6 +545,9 @@ while true; do
     --with-embree)
       WITH_EMBREE=true; shift; continue
     ;;
+    --with-oidn)
+      WITH_OIDN=true; shift; continue
+    ;;
     --with-jack)
       WITH_JACK=true; shift; continue;
     ;;
@@ -572,6 +594,7 @@ while true; do
       OPENVDB_FORCE_BUILD=true
       OPENCOLLADA_FORCE_BUILD=true
       EMBREE_FORCE_BUILD=true
+      OIDN_FORCE_BUILD=true
       FFMPEG_FORCE_BUILD=true
       ALEMBIC_FORCE_BUILD=true
       shift; continue
@@ -616,6 +639,9 @@ while true; do
     --build-embree)
       EMBREE_FORCE_BUILD=true; shift; continue
     ;;
+    --build-oidn)
+      OIDN_FORCE_BUILD=true; shift; continue
+    ;;
     --build-ffmpeg)
       FFMPEG_FORCE_BUILD=true; shift; continue
     ;;
@@ -635,6 +661,7 @@ while true; do
       OPENVDB_FORCE_REBUILD=true
       OPENCOLLADA_FORCE_REBUILD=true
       EMBREE_FORCE_REBUILD=true
+      OIDN_FORCE_REBUILD=true
       FFMPEG_FORCE_REBUILD=true
       ALEMBIC_FORCE_REBUILD=true
       shift; continue
@@ -677,6 +704,9 @@ while true; do
     --force-embree)
       EMBREE_FORCE_REBUILD=true; shift; continue
     ;;
+    --force-oidn)
+      OIDN_FORCE_REBUILD=true; shift; continue
+    ;;
     --force-ffmpeg)
       FFMPEG_FORCE_REBUILD=true; shift; continue
     ;;
@@ -719,6 +749,9 @@ while true; do
     --skip-embree)
       EMBREE_SKIP=true; shift; continue
     ;;
+    --skip-oidn)
+      OIDN_SKIP=true; shift; continue
+    ;;
     --skip-ffmpeg)
       FFMPEG_SKIP=true; shift; continue
     ;;
@@ -746,6 +779,9 @@ fi
 if [ "$WITH_ALL" = true -a "$EMBREE_SKIP" = false ]; then
   WITH_EMBREE=true
 fi
+if [ "$WITH_ALL" = true -a "$OIDN_SKIP" = false ]; then
+  WITH_OIDN=true
+fi
 if [ "$WITH_ALL" = true ]; then
   WITH_JACK=true
 fi
@@ -840,6 +876,11 @@ EMBREE_SOURCE=( "https://github.com/embree/embree/archive/v${EMBREE_VERSION}.tar
 #~ EMBREE_REPO_UID="4a12bfed63c90e85b6eab98b8cdd8dd2a3ba5809"
 #~ EMBREE_REPO_BRANCH="master"
 
+OIDN_USE_REPO=false
+OIDN_SOURCE=( "https://github.com/OpenImageDenoise/oidn/releases/download/v${OIDN_VERSION}/oidn-${OIDN_VERSION}.src.tar.gz" )
+#~ OIDN_SOURCE_REPO=( "https://github.com/OpenImageDenoise/oidn.git" )
+#~ OIDN_REPO_UID="dabfd9c80101edae9d25a710160d12d6d963c591"
+#~ OIDN_REPO_BRANCH="master"
 
 FFMPEG_SOURCE=( "http://ffmpeg.org/releases/ffmpeg-$FFMPEG_VERSION.tar.bz2" )
 
@@ -882,6 +923,7 @@ You may also want to build them yourself (optional ones are [between brackets]):
     * [OpenVDB $OPENVDB_VERSION_MIN] (from $OPENVDB_SOURCE), [Blosc $OPENVDB_BLOSC_VERSION] (from $OPENVDB_BLOSC_SOURCE).
     * [OpenCollada $OPENCOLLADA_VERSION] (from $OPENCOLLADA_SOURCE).
     * [Embree $EMBREE_VERSION] (from $EMBREE_SOURCE).
+    * [OpenImageDenoise $OIDN_VERSION] (from $OIDN_SOURCE).
     * [Alembic $ALEMBIC_VERSION] (from $ALEMBIC_SOURCE).\""
 
 if [ "$DO_SHOW_DEPS" = true ]; then
@@ -1065,13 +1107,14 @@ _create_inst_shortcut() {
 # ldconfig
 run_ldconfig() {
   _lib_path="$INST/$1/lib"
+  _lib64_path="$INST/$1/lib64"
   _ldconf_path="/etc/ld.so.conf.d/$1.conf"
   PRINT ""
   if [ ! $SUDO ]; then
     WARNING "--no-sudo enabled, impossible to run ldconfig for $1, you'll have to do it yourself..."
   else
     INFO "Running ldconfig for $1..."
-    $SUDO sh -c "echo \"$_lib_path\" > $_ldconf_path"
+    $SUDO sh -c "echo -e \"$_lib_path\n$_lib64_path\" > $_ldconf_path"
     $SUDO /sbin/ldconfig  # XXX OpenSuse does not include sbin in command path with sudo!!!
   fi
   PRINT ""
@@ -1932,7 +1975,8 @@ compile_OSL() {
     cmake_d="$cmake_d -D OSL_BUILD_PLUGINS=OFF"
     cmake_d="$cmake_d -D OSL_BUILD_TESTS=OFF"
     cmake_d="$cmake_d -D USE_SIMD=sse2"
-    cmake_d="$cmake_d -D OSL_BUILD_CPP11=1"
+    cmake_d="$cmake_d -D USE_LLVM_BITCODE=OFF"
+    cmake_d="$cmake_d -D USE_PARTIO=OFF"
 
     #~ cmake_d="$cmake_d -D ILMBASE_VERSION=$ILMBASE_VERSION"
 
@@ -2552,6 +2596,98 @@ compile_Embree() {
   fi
 }
 
+#### Build OpenImageDenoise ####
+_init_oidn() {
+  _src=$SRC/oidn-$OIDN_VERSION
+  _git=true
+  _inst=$INST/oidn-$OIDN_VERSION
+  _inst_shortcut=$INST/oidn
+}
+
+clean_oidn() {
+  _init_oidn
+  _clean
+}
+
+compile_OIDN() {
+  if [ "$NO_BUILD" = true ]; then
+    WARNING "--no-build enabled, OpenImageDenoise will not be compiled!"
+    return
+  fi
+
+  # To be changed each time we make edits that would modify the compiled results!
+  oidn_magic=9
+  _init_oidn
+
+  # Clean install if needed!
+  magic_compile_check oidn-$OIDN_VERSION $oidn_magic
+  if [ $? -eq 1 -o "$OIDN_FORCE_REBUILD" = true ]; then
+    clean_oidn
+  fi
+
+  if [ ! -d $_inst ]; then
+    INFO "Building OpenImageDenoise-$OIDN_VERSION"
+
+    prepare_opt
+
+    if [ ! -d $_src ]; then
+      mkdir -p $SRC
+      if [ "OIDN_USE_REPO" = true ]; then
+        git clone $OIDN_SOURCE_REPO $_src
+      else
+        download OIDN_SOURCE[@] "$_src.tar.gz"
+        INFO "Unpacking OpenImageDenoise-$OIDN_VERSION"
+        tar -C $SRC -xf $_src.tar.gz
+      fi
+    fi
+
+    cd $_src
+
+    if [ "$OIDN_USE_REPO" = true ]; then
+      git pull origin $OIDN_REPO_BRANCH
+
+      # Stick to same rev as windows' libs...
+      git checkout $OIDN_REPO_UID
+      git reset --hard
+    fi
+
+    # Always refresh the whole build!
+    if [ -d build ]; then
+      rm -rf build
+    fi
+    mkdir build
+    cd build
+
+    cmake_d="-D CMAKE_BUILD_TYPE=Release"
+    cmake_d="$cmake_d -D CMAKE_INSTALL_PREFIX=$_inst"
+    cmake_d="$cmake_d -D WITH_EXAMPLE=OFF"
+    cmake_d="$cmake_d -D WITH_TEST=OFF"
+    cmake_d="$cmake_d -D OIDN_STATIC_LIB=ON"
+
+    cmake $cmake_d ../
+
+    make -j$THREADS && make install
+    make clean
+
+    if [ -d $_inst ]; then
+      _create_inst_shortcut
+    else
+      ERROR "OpenImageDenoise-$OIDN_VERSION failed to compile, exiting"
+      exit 1
+    fi
+
+    magic_compile_set oidn-$OIDN_VERSION $oidn_magic
+
+    cd $CWD
+    INFO "Done compiling OpenImageDenoise-$OIDN_VERSION!"
+  else
+    INFO "Own OpenImageDenoise-$OIDN_VERSION is up to date, nothing to do!"
+    INFO "If you want to force rebuild of this lib, use the --force-oidn option."
+  fi
+
+  run_ldconfig "oidn"
+}
+
 #### Build FFMPEG ####
 _init_ffmpeg() {
   _src=$SRC/ffmpeg-$FFMPEG_VERSION
@@ -3148,6 +3284,24 @@ install_DEB() {
     fi
   fi
 
+  if [ "$WITH_OIDN" = true ]; then
+    _do_compile_oidn=false
+    PRINT ""
+    if [ "$OIDN_SKIP" = true ]; then
+      WARNING "Skipping OpenImgeDenoise installation, as requested..."
+    elif [ "$OIDN_FORCE_BUILD" = true ]; then
+      INFO "Forced OpenImageDenoise building, as requested..."
+      _do_compile_oidn=true
+    else
+      # No package currently!
+      _do_compile_oidn=true
+    fi
+
+    if [ "$_do_compile_oidn" = true ]; then
+      compile_OIDN
+    fi
+  fi
+
   PRINT ""
   if [ "$FFMPEG_SKIP" = true ]; then
     WARNING "Skipping FFMpeg installation, as requested..."
@@ -3300,7 +3454,7 @@ install_RPM() {
       $SUDO dnf -y update
 
     elif [ "$RPM" = "RHEL" ]; then
-      if [ "`grep '6\.' /etc/redhat-release`" ]; then
+      if [ "`grep '[^.]6\.' /etc/redhat-release`" ]; then
         ERROR "Building with GCC 4.4 is not supported!"
         exit 1
       else
@@ -3722,6 +3876,24 @@ install_RPM() {
     fi
   fi
 
+  if [ "$WITH_OIDN" = true ]; then
+    _do_compile_oidn=false
+    PRINT ""
+    if [ "$OIDN_SKIP" = true ]; then
+      WARNING "Skipping OpenImgeDenoise installation, as requested..."
+    elif [ "$OIDN_FORCE_BUILD" = true ]; then
+      INFO "Forced OpenImageDenoise building, as requested..."
+      _do_compile_oidn=true
+    else
+      # No package currently!
+      _do_compile_oidn=true
+    fi
+
+    if [ "$_do_compile_oidn" = true ]; then
+      compile_OIDN
+    fi
+  fi
+
   PRINT ""
   if [ "$FFMPEG_SKIP" = true ]; then
     WARNING "Skipping FFMpeg installation, as requested..."
@@ -4186,6 +4358,24 @@ install_ARCH() {
     fi
   fi
 
+  if [ "$WITH_OIDN" = true ]; then
+    _do_compile_oidn=false
+    PRINT ""
+    if [ "$OIDN_SKIP" = true ]; then
+      WARNING "Skipping OpenImgeDenoise installation, as requested..."
+    elif [ "$OIDN_FORCE_BUILD" = true ]; then
+      INFO "Forced OpenImageDenoise building, as requested..."
+      _do_compile_oidn=true
+    else
+      # No package currently!
+      _do_compile_oidn=true
+    fi
+
+    if [ "$_do_compile_oidn" = true ]; then
+      compile_OIDN
+    fi
+  fi
+
   PRINT ""
   if [ "$FFMPEG_SKIP" = true ]; then
     WARNING "Skipping FFMpeg installation, as requested..."
@@ -4372,6 +4562,24 @@ install_OTHER() {
     fi
   fi
 
+  if [ "$WITH_OIDN" = true ]; then
+    _do_compile_oidn=false
+    PRINT ""
+    if [ "$OIDN_SKIP" = true ]; then
+      WARNING "Skipping OpenImgeDenoise installation, as requested..."
+    elif [ "$OIDN_FORCE_BUILD" = true ]; then
+      INFO "Forced OpenImageDenoise building, as requested..."
+      _do_compile_oidn=true
+    else
+      # No package currently!
+      _do_compile_oidn=true
+    fi
+
+    if [ "$_do_compile_oidn" = true ]; then
+      compile_OIDN
+    fi
+  fi
+
   PRINT ""
   if [ "$FFMPEG_SKIP" = true ]; then
     WARNING "Skipping FFMpeg installation, as requested..."
@@ -4587,6 +4795,17 @@ print_info() {
     fi
   fi
 
+  if [ "$WITH_OIDN" = true ]; then
+    _1="-D WITH_OPENIMAGEDENOISE=ON"
+    PRINT "  $_1"
+    _buildargs="$_buildargs $_1"
+    if [ -d $INST/oidn ]; then
+      _1="-D OPENIMAGEDENOISE_ROOT_DIR=$INST/oidn"
+      PRINT "  $_1"
+      _buildargs="$_buildargs $_1"
+    fi
+  fi
+
   if [ "$WITH_JACK" = true ]; then
     _1="-D WITH_JACK=ON"
     _2="-D WITH_JACK_DYNLOAD=ON"

build_files/build_environment/patches/openimagedenoise.diff

@@ -0,0 +1,119 @@
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index 70ec895..e616b63 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -178,7 +178,9 @@ set_property(TARGET ${PROJECT_NAME} PROPERTY SOVERSION "0")
+ ## Open Image Denoise examples
+ ## ----------------------------------------------------------------------------
+ 
+-add_subdirectory(examples)
++if(WITH_EXAMPLE)
++  add_subdirectory(examples)
++endif()
+ 
+ ## ----------------------------------------------------------------------------
+ ## Open Image Denoise install and packaging
+Submodule mkl-dnn contains modified content
+diff --git a/mkl-dnn/cmake/TBB.cmake b/mkl-dnn/cmake/TBB.cmake
+index 0711e699..c14210b6 100644
+--- a/mkl-dnn/cmake/TBB.cmake
++++ b/mkl-dnn/cmake/TBB.cmake
+@@ -90,8 +90,8 @@ if(WIN32)
+             NO_DEFAULT_PATH
+         )
+         set(TBB_LIB_DIR ${TBB_ROOT}/lib/${TBB_ARCH}/${TBB_VCVER})
+-        find_library(TBB_LIBRARY tbb PATHS ${TBB_LIB_DIR} ${TBB_ROOT}/lib NO_DEFAULT_PATH)
+-        find_library(TBB_LIBRARY_MALLOC tbbmalloc PATHS ${TBB_LIB_DIR} ${TBB_ROOT}/lib NO_DEFAULT_PATH)
++        find_library(TBB_LIBRARY tbb_static PATHS ${TBB_LIB_DIR} ${TBB_ROOT}/lib NO_DEFAULT_PATH)
++        find_library(TBB_LIBRARY_MALLOC tbbmalloc_static PATHS ${TBB_LIB_DIR} ${TBB_ROOT}/lib NO_DEFAULT_PATH)
+     endif()
+ 
+ else()
+@@ -138,13 +138,13 @@ else()
+         set(TBB_LIBRARY_MALLOC TBB_LIBRARY_MALLOC-NOTFOUND)
+         if(APPLE)
+             find_path(TBB_INCLUDE_DIR tbb/task_scheduler_init.h PATHS ${TBB_ROOT}/include NO_DEFAULT_PATH)
+-            find_library(TBB_LIBRARY tbb PATHS ${TBB_ROOT}/lib NO_DEFAULT_PATH)
+-            find_library(TBB_LIBRARY_MALLOC tbbmalloc PATHS ${TBB_ROOT}/lib NO_DEFAULT_PATH)
++            find_library(TBB_LIBRARY tbb_static PATHS ${TBB_ROOT}/lib NO_DEFAULT_PATH)
++            find_library(TBB_LIBRARY_MALLOC tbbmalloc_static PATHS ${TBB_ROOT}/lib NO_DEFAULT_PATH)
+         else()
+             find_path(TBB_INCLUDE_DIR tbb/task_scheduler_init.h PATHS ${TBB_ROOT}/include NO_DEFAULT_PATH)
+             set(TBB_HINTS HINTS ${TBB_ROOT}/lib/intel64/gcc4.4 ${TBB_ROOT}/lib ${TBB_ROOT}/lib64 PATHS /usr/libx86_64-linux-gnu/)
+-            find_library(TBB_LIBRARY tbb ${TBB_HINTS})
+-            find_library(TBB_LIBRARY_MALLOC tbbmalloc ${TBB_HINTS})
++            find_library(TBB_LIBRARY tbb_static ${TBB_HINTS})
++            find_library(TBB_LIBRARY_MALLOC tbbmalloc_static ${TBB_HINTS})
+         endif()
+     endif()
+ 
+diff '--ignore-matching-lines=:' -ur '--exclude=*.svn*' -u -r
+--- a/cmake/install.cmake	2019-08-12 18:02:20.794402575 +0200
++++ b/cmake/install.cmake	2019-08-12 18:06:07.470045703 +0200
+@@ -18,6 +18,13 @@
+ ## Install library
+ ## ----------------------------------------------------------------------------
+ 
++if(UNIX)
++install(FILES
++  ${CMAKE_BINARY_DIR}/libOpenImageDenoise.a
++  ${CMAKE_BINARY_DIR}/libmkldnn.a
++  ${CMAKE_BINARY_DIR}/libcommon.a
++  DESTINATION ${CMAKE_INSTALL_LIBDIR})
++else()
+ install(TARGETS ${PROJECT_NAME}
+   EXPORT
+     ${PROJECT_NAME}_Export
+@@ -38,6 +45,7 @@
+       DESTINATION ${CMAKE_INSTALL_LIBDIR} COMPONENT devel
+   )
+ endif()
++endif()
+ 
+ ## ----------------------------------------------------------------------------
+ ## Install headers
+@@ -78,6 +86,7 @@
+ ## Install CMake configuration files
+ ## ----------------------------------------------------------------------------
+ 
++if(NOT UNIX)
+ install(EXPORT ${PROJECT_NAME}_Export
+   DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${PROJECT_NAME}
+   #NAMESPACE ${PROJECT_NAME}::
+@@ -92,3 +101,4 @@
+   DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${PROJECT_NAME}
+   COMPONENT devel
+ )
++endif()
+diff '--ignore-matching-lines=:' -ur '--exclude=*.svn*' -u -r
+--- a/CMakeLists.txt	2019-08-12 14:22:00.974078598 +0200
++++ b/CMakeLists.txt	2019-08-12 18:05:05.949057375 +0200
+@@ -14,7 +14,11 @@
+ ## limitations under the License.                                           ##
+ ## ======================================================================== ##
+ 
+-cmake_minimum_required(VERSION 3.1)
++if(UNIX)
++  cmake_minimum_required(VERSION 3.1)
++else()
++  cmake_minimum_required(VERSION 3.13)
++endif()
+ 
+ set(OIDN_VERSION_MAJOR 1)
+ set(OIDN_VERSION_MINOR 0)
+@@ -32,13 +36,8 @@
+ set(CMAKE_MODULE_PATH ${CMAKE_MODULE_PATH} "${PROJECT_SOURCE_DIR}/cmake")
+ 
+ # Build as shared or static library
+-if(${CMAKE_VERSION} VERSION_GREATER_EQUAL "3.13.0")
+-  option(OIDN_STATIC_LIB "Build Open Image Denoise as a static library.")
+-  mark_as_advanced(CLEAR OIDN_STATIC_LIB)
+-else()
+-  set(OIDN_STATIC_LIB OFF CACHE BOOL "Build Open Image Denoise as a static library." FORCE)
+-  mark_as_advanced(OIDN_STATIC_LIB)
+-endif()
++option(OIDN_STATIC_LIB "Build Open Image Denoise as a static library.")
++mark_as_advanced(CLEAR OIDN_STATIC_LIB)
+ if(OIDN_STATIC_LIB)
+   set(OIDN_LIB_TYPE STATIC)
+ else()

build_files/buildbot/slave_update.py

@@ -0,0 +1,31 @@
+# ##### BEGIN GPL LICENSE BLOCK #####
+#
+#  This program is free software; you can redistribute it and/or
+#  modify it under the terms of the GNU General Public License
+#  as published by the Free Software Foundation; either version 2
+#  of the License, or (at your option) any later version.
+#
+#  This program is distributed in the hope that it will be useful,
+#  but WITHOUT ANY WARRANTY; without even the implied warranty of
+#  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+#  GNU General Public License for more details.
+#
+#  You should have received a copy of the GNU General Public License
+#  along with this program; if not, write to the Free Software Foundation,
+#  Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
+#
+# ##### END GPL LICENSE BLOCK #####
+
+# <pep8 compliant>
+
+import os
+import runpy
+
+# We run from build/ directory.
+blender_dir = os.path.join('..', 'blender.git')
+blender_dir = os.path.abspath(blender_dir)
+os.chdir(blender_dir)
+
+# Run make update which handles all libraries and submodules.
+make_update = os.path.join(blender_dir, "build_files", "utils", "make_update.py")
+runpy.run_path(make_update)

build_files/cmake/Modules/FindOpenImageDenoise.cmake

@@ -0,0 +1,122 @@
+# - Find OpenImageDenoise library
+# Find the native OpenImageDenoise includes and library
+# This module defines
+#  OPENIMAGEDENOISE_INCLUDE_DIRS, where to find oidn.h, Set when
+#                    OPENIMAGEDENOISE is found.
+#  OPENIMAGEDENOISE_LIBRARIES, libraries to link against to use OpenImageDenoise.
+#  OPENIMAGEDENOISE_ROOT_DIR, The base directory to search for OpenImageDenoise.
+#                This can also be an environment variable.
+#  OPENIMAGEDENOISE_FOUND, If false, do not try to use OpenImageDenoise.
+#
+# also defined, but not for general use are
+#  OPENIMAGEDENOISE_LIBRARY, where to find the OpenImageDenoise library.
+
+#=============================================================================
+# Copyright 2019 Blender Foundation.
+#
+# Distributed under the OSI-approved BSD License (the "License");
+# see accompanying file Copyright.txt for details.
+#
+# This software is distributed WITHOUT ANY WARRANTY; without even the
+# implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+# See the License for more information.
+#=============================================================================
+
+# If OPENIMAGEDENOISE_ROOT_DIR was defined in the environment, use it.
+IF(NOT OPENIMAGEDENOISE_ROOT_DIR AND NOT $ENV{OPENIMAGEDENOISE_ROOT_DIR} STREQUAL "")
+  SET(OPENIMAGEDENOISE_ROOT_DIR $ENV{OPENIMAGEDENOISE_ROOT_DIR})
+ENDIF()
+
+SET(_openimagedenoise_SEARCH_DIRS
+  ${OPENIMAGEDENOISE_ROOT_DIR}
+  /usr/local
+  /sw # Fink
+  /opt/local # DarwinPorts
+  /opt/lib/openimagedenoise
+)
+
+FIND_PATH(OPENIMAGEDENOISE_INCLUDE_DIR
+  NAMES
+    OpenImageDenoise/oidn.h
+  HINTS
+    ${_openimagedenoise_SEARCH_DIRS}
+  PATH_SUFFIXES
+    include
+)
+
+SET(_openimagedenoise_FIND_COMPONENTS
+  OpenImageDenoise
+)
+
+# These are needed when building statically
+SET(_openimagedenoise_FIND_STATIC_COMPONENTS
+  common
+  mkldnn
+)
+
+SET(_openimagedenoise_LIBRARIES)
+FOREACH(COMPONENT ${_openimagedenoise_FIND_COMPONENTS})
+  STRING(TOUPPER ${COMPONENT} UPPERCOMPONENT)
+
+  FIND_LIBRARY(OPENIMAGEDENOISE_${UPPERCOMPONENT}_LIBRARY
+    NAMES
+      ${COMPONENT}
+    HINTS
+      ${_openimagedenoise_SEARCH_DIRS}
+    PATH_SUFFIXES
+      lib64 lib
+    )
+  LIST(APPEND _openimagedenoise_LIBRARIES "${OPENIMAGEDENOISE_${UPPERCOMPONENT}_LIBRARY}")
+ENDFOREACH()
+
+FOREACH(COMPONENT ${_openimagedenoise_FIND_STATIC_COMPONENTS})
+  STRING(TOUPPER ${COMPONENT} UPPERCOMPONENT)
+
+  FIND_LIBRARY(OPENIMAGEDENOISE_${UPPERCOMPONENT}_LIBRARY
+    NAMES
+      ${COMPONENT}
+    HINTS
+      ${_openimagedenoise_SEARCH_DIRS}
+    PATH_SUFFIXES
+      lib64 lib
+    )
+  MARK_AS_ADVANCED(OPENIMAGEDENOISE_${UPPERCOMPONENT}_LIBRARY)
+  IF(OPENIMAGEDENOISE_${UPPERCOMPONENT}_LIBRARY)
+    LIST(APPEND _openimagedenoise_LIBRARIES "${OPENIMAGEDENOISE_${UPPERCOMPONENT}_LIBRARY}")
+  ENDIF()
+ENDFOREACH()
+
+FIND_LIBRARY(OPENIMAGEDENOISE_LIBRARY
+  NAMES
+    OpenImageDenoise
+  HINTS
+    ${_openimagedenoise_SEARCH_DIRS}
+  PATH_SUFFIXES
+    lib64 lib
+  )
+
+# handle the QUIETLY and REQUIRED arguments and set OPENIMAGEDENOISE_FOUND to TRUE if
+# all listed variables are TRUE
+INCLUDE(FindPackageHandleStandardArgs)
+FIND_PACKAGE_HANDLE_STANDARD_ARGS(OPENIMAGEDENOISE DEFAULT_MSG
+    OPENIMAGEDENOISE_LIBRARY OPENIMAGEDENOISE_INCLUDE_DIR)
+
+IF(OPENIMAGEDENOISE_FOUND)
+  SET(OPENIMAGEDENOISE_LIBRARIES ${_openimagedenoise_LIBRARIES})
+  SET(OPENIMAGEDENOISE_INCLUDE_DIRS ${OPENIMAGEDENOISE_INCLUDE_DIR})
+ELSE()
+  SET(OPENIMAGEDENOISE_FOUND FALSE)
+ENDIF()
+
+MARK_AS_ADVANCED(
+  OPENIMAGEDENOISE_INCLUDE_DIR
+)
+
+FOREACH(COMPONENT ${_openimagedenoise_FIND_COMPONENTS})
+  STRING(TOUPPER ${COMPONENT} UPPERCOMPONENT)
+  MARK_AS_ADVANCED(OPENIMAGEDENOISE_${UPPERCOMPONENT}_LIBRARY)
+ENDFOREACH()
+
+UNSET(_openimagedenoise_SEARCH_DIRS)
+UNSET(_openimagedenoise_FIND_COMPONENTS)
+UNSET(_openimagedenoise_LIBRARIES)

build_files/cmake/Modules/GTestTesting.cmake

@@ -14,12 +14,15 @@
 
 macro(BLENDER_SRC_GTEST_EX NAME SRC EXTRA_LIBS DO_ADD_TEST)
   if(WITH_GTESTS)
+    set(TARGET_NAME ${NAME}_test)
     get_property(_current_include_directories
                  DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}
                  PROPERTY INCLUDE_DIRECTORIES)
     set(TEST_INC
       ${_current_include_directories}
       ${CMAKE_SOURCE_DIR}/tests/gtests
+    )
+    set(TEST_INC_SYS
       ${GLOG_INCLUDE_DIRS}
       ${GFLAGS_INCLUDE_DIRS}
       ${CMAKE_SOURCE_DIR}/extern/gtest/include
@@ -27,8 +30,10 @@ macro(BLENDER_SRC_GTEST_EX NAME SRC EXTRA_LIBS DO_ADD_TEST)
     )
     unset(_current_include_directories)
 
-    add_executable(${NAME}_test ${SRC})
-    target_link_libraries(${NAME}_test
+    add_executable(${TARGET_NAME} ${SRC})
+    target_include_directories(${TARGET_NAME} PUBLIC "${TEST_INC}")
+    target_include_directories(${TARGET_NAME} SYSTEM PUBLIC "${TEST_INC_SYS}")
+    target_link_libraries(${TARGET_NAME}
                           ${EXTRA_LIBS}
                           ${PLATFORM_LINKLIBS}
                           bf_testing_main
@@ -41,20 +46,22 @@ macro(BLENDER_SRC_GTEST_EX NAME SRC EXTRA_LIBS DO_ADD_TEST)
                           ${GLOG_LIBRARIES}
                           ${GFLAGS_LIBRARIES})
     if(WITH_OPENMP_STATIC)
-      target_link_libraries(${NAME}_test ${OpenMP_LIBRARIES})
+      target_link_libraries(${TARGET_NAME} ${OpenMP_LIBRARIES})
     endif()
-    set_target_properties(${NAME}_test PROPERTIES
+    set_target_properties(${TARGET_NAME} PROPERTIES
                           RUNTIME_OUTPUT_DIRECTORY         "${TESTS_OUTPUT_DIR}"
                           RUNTIME_OUTPUT_DIRECTORY_RELEASE "${TESTS_OUTPUT_DIR}"
-                          RUNTIME_OUTPUT_DIRECTORY_DEBUG   "${TESTS_OUTPUT_DIR}"
-                          INCLUDE_DIRECTORIES              "${TEST_INC}")
+                          RUNTIME_OUTPUT_DIRECTORY_DEBUG   "${TESTS_OUTPUT_DIR}")
     if(${DO_ADD_TEST})
-      add_test(NAME ${NAME}_test COMMAND ${TESTS_OUTPUT_DIR}/${NAME}_test WORKING_DIRECTORY $<TARGET_FILE_DIR:blender>)
+      add_test(NAME ${TARGET_NAME} COMMAND ${TESTS_OUTPUT_DIR}/${TARGET_NAME} WORKING_DIRECTORY $<TARGET_FILE_DIR:blender>)
 
       # Don't fail tests on leaks since these often happen in external libraries
       # that we can't fix.
-      set_tests_properties(${NAME}_test PROPERTIES ENVIRONMENT LSAN_OPTIONS=exitcode=0)
+      set_tests_properties(${TARGET_NAME} PROPERTIES ENVIRONMENT LSAN_OPTIONS=exitcode=0)
     endif()
+    unset(TEST_INC)
+    unset(TEST_INC_SYS)
+    unset(TARGET_NAME)
   endif()
 endmacro()
 

build_files/cmake/config/blender_full.cmake

@@ -40,6 +40,7 @@ set(WITH_AUDASPACE           ON  CACHE BOOL "" FORCE)
 set(WITH_OPENAL              ON  CACHE BOOL "" FORCE)
 set(WITH_OPENCOLLADA         ON  CACHE BOOL "" FORCE)
 set(WITH_OPENCOLORIO         ON  CACHE BOOL "" FORCE)
+set(WITH_OPENIMAGEDENOISE    ON  CACHE BOOL "" FORCE)
 set(WITH_OPENMP              ON  CACHE BOOL "" FORCE)
 set(WITH_OPENSUBDIV          ON  CACHE BOOL "" FORCE)
 set(WITH_OPENVDB             ON  CACHE BOOL "" FORCE)

build_files/cmake/config/blender_lite.cmake

@@ -45,6 +45,7 @@ set(WITH_AUDASPACE           OFF CACHE BOOL "" FORCE)
 set(WITH_OPENAL              OFF CACHE BOOL "" FORCE)
 set(WITH_OPENCOLLADA         OFF CACHE BOOL "" FORCE)
 set(WITH_OPENCOLORIO         OFF CACHE BOOL "" FORCE)
+set(WITH_OPENIMAGEDENOISE    OFF CACHE BOOL "" FORCE)
 set(WITH_OPENIMAGEIO         OFF CACHE BOOL "" FORCE)
 set(WITH_OPENMP              OFF CACHE BOOL "" FORCE)
 set(WITH_OPENSUBDIV          OFF CACHE BOOL "" FORCE)

build_files/cmake/config/blender_release.cmake

@@ -41,6 +41,7 @@ set(WITH_AUDASPACE           ON  CACHE BOOL "" FORCE)
 set(WITH_OPENAL              ON  CACHE BOOL "" FORCE)
 set(WITH_OPENCOLLADA         ON  CACHE BOOL "" FORCE)
 set(WITH_OPENCOLORIO         ON  CACHE BOOL "" FORCE)
+set(WITH_OPENIMAGEDENOISE    ON  CACHE BOOL "" FORCE)
 set(WITH_OPENMP              ON  CACHE BOOL "" FORCE)
 set(WITH_OPENSUBDIV          ON  CACHE BOOL "" FORCE)
 set(WITH_OPENVDB             ON  CACHE BOOL "" FORCE)

build_files/cmake/macros.cmake

@@ -352,6 +352,9 @@ function(SETUP_LIBDIRS)
     if(WITH_OPENIMAGEIO)
       link_directories(${OPENIMAGEIO_LIBPATH})
     endif()
+    if(WITH_OPENIMAGEDENOISE)
+      link_directories(${OPENIMAGEDENOISE_LIBPATH})
+    endif()
     if(WITH_OPENCOLORIO)
       link_directories(${OPENCOLORIO_LIBPATH})
     endif()
@@ -462,6 +465,9 @@ function(setup_liblinks
   if(WITH_OPENIMAGEIO)
     target_link_libraries(${target} ${OPENIMAGEIO_LIBRARIES})
   endif()
+  if(WITH_OPENIMAGEDENOISE)
+    target_link_libraries(${target} ${OPENIMAGEDENOISE_LIBRARIES} ${TBB_LIBRARIES})
+  endif()
   if(WITH_OPENCOLORIO)
     target_link_libraries(${target} ${OPENCOLORIO_LIBRARIES})
   endif()

build_files/cmake/packaging.cmake

@@ -80,22 +80,28 @@ if(APPLE)
 endif()
 
 if(WIN32)
-  set(CPACK_PACKAGE_INSTALL_DIRECTORY "Blender Foundation/Blender")
-  set(CPACK_PACKAGE_INSTALL_REGISTRY_KEY "Blender Foundation/Blender")
+  set(CPACK_PACKAGE_INSTALL_DIRECTORY "Blender Foundation/Blender ${MAJOR_VERSION}.${MINOR_VERSION}")
+  set(CPACK_PACKAGE_INSTALL_REGISTRY_KEY "Blender Foundation/Blender ${MAJOR_VERSION}.${MINOR_VERSION}")
 
   set(CPACK_NSIS_MUI_ICON ${CMAKE_SOURCE_DIR}/release/windows/icons/winblender.ico)
   set(CPACK_NSIS_COMPRESSOR "/SOLID lzma")
 
   set(CPACK_RESOURCE_FILE_LICENSE ${CMAKE_SOURCE_DIR}/release/text/GPL3-license.txt)
   set(CPACK_WIX_PRODUCT_ICON ${CMAKE_SOURCE_DIR}/release/windows/icons/winblender.ico)
-  set(CPACK_WIX_UPGRADE_GUID "B767E4FD-7DE7-4094-B051-3AE62E13A17A")
+
+  set(BLENDER_NAMESPACE_GUID "507F933F-5898-404A-9A05-18282FD491A6")
+
+  string(UUID CPACK_WIX_UPGRADE_GUID
+    NAMESPACE ${BLENDER_NAMESPACE_GUID}
+    NAME ${CPACK_PACKAGE_INSTALL_DIRECTORY}
+    TYPE SHA1 UPPER
+  )
 
   set(CPACK_WIX_TEMPLATE ${LIBDIR}/package/installer_wix/WIX.template)
   set(CPACK_WIX_UI_BANNER ${LIBDIR}/package/installer_wix/WIX_UI_BANNER.bmp)
   set(CPACK_WIX_UI_DIALOG ${LIBDIR}/package/installer_wix/WIX_UI_DIALOG.bmp)
 
-  #force lzma instead of deflate
-  set(CPACK_WIX_LIGHT_EXTRA_FLAGS -dcl:high)
+  set(CPACK_WIX_LIGHT_EXTRA_FLAGS -dcl:medium)
 endif()
 
 set(CPACK_PACKAGE_EXECUTABLES "blender" "blender")

build_files/cmake/platform/platform_apple.cmake

@@ -382,6 +382,19 @@ if(WITH_CYCLES_EMBREE)
   set(PLATFORM_LINKFLAGS "${PLATFORM_LINKFLAGS} -Xlinker -stack_size -Xlinker 0x100000")
 endif()
 
+if(WITH_OPENIMAGEDENOISE)
+  find_package(OpenImageDenoise)
+  find_package(TBB)
+
+  if(NOT OPENIMAGEDENOISE_FOUND)
+    set(WITH_OPENIMAGEDENOISE OFF)
+    message(STATUS "OpenImageDenoise not found")
+  elseif(NOT TBB_FOUND)
+    set(WITH_OPENIMAGEDENOISE OFF)
+    message(STATUS "TBB not found")
+  endif()
+endif()
+
 # CMake FindOpenMP doesn't know about AppleClang before 3.12, so provide custom flags.
 if(WITH_OPENMP)
   if(CMAKE_C_COMPILER_ID MATCHES "AppleClang" AND CMAKE_C_COMPILER_VERSION VERSION_GREATER_EQUAL "7.0")

build_files/cmake/platform/platform_unix.cmake

@@ -368,6 +368,15 @@ if(WITH_CYCLES_EMBREE)
   find_package(Embree 3.2.4 REQUIRED)
 endif()
 
+if(WITH_OPENIMAGEDENOISE)
+  find_package_wrapper(OpenImageDenoise)
+
+  if(NOT OPENIMAGEDENOISE_FOUND)
+    set(WITH_OPENIMAGEDENOISE OFF)
+    message(STATUS "OpenImageDenoise not found")
+  endif()
+endif()
+
 if(WITH_LLVM)
   if(EXISTS ${LIBDIR})
     set(LLVM_STATIC ON)

build_files/cmake/platform/platform_win32.cmake

@@ -131,12 +131,12 @@ if(MSVC_CLANG) # Clangs version of cl doesn't support all flags
   set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${CXX_WARN_FLAGS} /nologo /J /Gd /EHsc -Wno-unused-command-line-argument -Wno-microsoft-enum-forward-reference ")
   set(CMAKE_C_FLAGS     "${CMAKE_C_FLAGS} /nologo /J /Gd -Wno-unused-command-line-argument -Wno-microsoft-enum-forward-reference")
 else()
-  set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} /nologo /J /Gd /MP /EHsc")
-  set(CMAKE_C_FLAGS     "${CMAKE_C_FLAGS} /nologo /J /Gd /MP")
+  set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} /nologo /J /Gd /MP /EHsc /bigobj")
+  set(CMAKE_C_FLAGS     "${CMAKE_C_FLAGS} /nologo /J /Gd /MP /bigobj")
 endif()
 
-set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} /MTd")
-set(CMAKE_C_FLAGS_DEBUG "${CMAKE_C_FLAGS_DEBUG} /MTd")
+set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} /MTd /ZI")
+set(CMAKE_C_FLAGS_DEBUG "${CMAKE_C_FLAGS_DEBUG} /MTd /ZI")
 set(CMAKE_CXX_FLAGS_RELEASE "${CMAKE_CXX_FLAGS_RELEASE} /MT")
 set(CMAKE_C_FLAGS_RELEASE "${CMAKE_C_FLAGS_RELEASE} /MT")
 set(CMAKE_CXX_FLAGS_MINSIZEREL "${CMAKE_CXX_FLAGS_MINSIZEREL} /MT")
@@ -347,15 +347,13 @@ if(WITH_PYTHON)
   set(PYTHON_VERSION 3.7) # CACHE STRING)
 
   string(REPLACE "." "" _PYTHON_VERSION_NO_DOTS ${PYTHON_VERSION})
-  # Use shared libs for vc2008 and vc2010 until we actually have vc2010 libs
-  set(PYTHON_LIBRARY ${LIBDIR}/python/lib/python${_PYTHON_VERSION_NO_DOTS}.lib)
-  set(PYTHON_LIBRARY_DEBUG ${LIBDIR}/python/lib/python${_PYTHON_VERSION_NO_DOTS}_d.lib)
+  set(PYTHON_LIBRARY ${LIBDIR}/python/${_PYTHON_VERSION_NO_DOTS}/libs/python${_PYTHON_VERSION_NO_DOTS}.lib)
+  set(PYTHON_LIBRARY_DEBUG ${LIBDIR}/python/${_PYTHON_VERSION_NO_DOTS}/libs/python${_PYTHON_VERSION_NO_DOTS}_d.lib)
 
+  set(PYTHON_INCLUDE_DIR ${LIBDIR}/python/${_PYTHON_VERSION_NO_DOTS}/include)
+  set(PYTHON_NUMPY_INCLUDE_DIRS ${LIBDIR}/python/${_PYTHON_VERSION_NO_DOTS}/lib/site-packages/numpy/core/include)
+  set(NUMPY_FOUND On)
   unset(_PYTHON_VERSION_NO_DOTS)
-
-  # Shared includes for both vc2008 and vc2010
-  set(PYTHON_INCLUDE_DIR ${LIBDIR}/python/include/python${PYTHON_VERSION})
-
   # uncached vars
   set(PYTHON_INCLUDE_DIRS "${PYTHON_INCLUDE_DIR}")
   set(PYTHON_LIBRARIES debug "${PYTHON_LIBRARY_DEBUG}" optimized "${PYTHON_LIBRARY}" )
@@ -420,7 +418,7 @@ endif()
 
 if(WITH_OPENIMAGEIO)
   windows_find_package(OpenImageIO)
-  set(OPENIMAGEIO ${LIBDIR}/openimageio)
+  set(OPENIMAGEIO ${LIBDIR}/OpenImageIO)
   set(OPENIMAGEIO_LIBPATH ${OPENIMAGEIO}/lib)
   set(OPENIMAGEIO_INCLUDE_DIRS ${OPENIMAGEIO}/include)
   set(OIIO_OPTIMIZED optimized ${OPENIMAGEIO_LIBPATH}/OpenImageIO.lib optimized ${OPENIMAGEIO_LIBPATH}/OpenImageIO_Util.lib)
@@ -461,14 +459,14 @@ if(WITH_LLVM)
 endif()
 
 if(WITH_OPENCOLORIO)
-  set(OPENCOLORIO ${LIBDIR}/opencolorio)
+  set(OPENCOLORIO ${LIBDIR}/OpenColorIO)
   set(OPENCOLORIO_INCLUDE_DIRS ${OPENCOLORIO}/include)
-  set(OPENCOLORIO_LIBPATH ${LIBDIR}/opencolorio/lib)
+  set(OPENCOLORIO_LIBPATH ${OPENCOLORIO}/lib)
   set(OPENCOLORIO_LIBRARIES
     optimized ${OPENCOLORIO_LIBPATH}/OpenColorIO.lib
     optimized ${OPENCOLORIO_LIBPATH}/tinyxml.lib
     optimized ${OPENCOLORIO_LIBPATH}/libyaml-cpp.lib
-    debug ${OPENCOLORIO_LIBPATH}/OpenColorIO_d.lib
+    debug ${OPENCOLORIO_LIBPATH}/OpencolorIO_d.lib
     debug ${OPENCOLORIO_LIBPATH}/tinyxml_d.lib
     debug ${OPENCOLORIO_LIBPATH}/libyaml-cpp_d.lib
   )
@@ -479,19 +477,32 @@ if(WITH_OPENVDB)
   set(BLOSC_LIBRARIES optimized ${LIBDIR}/blosc/lib/libblosc.lib debug ${LIBDIR}/blosc/lib/libblosc_d.lib)
   set(TBB_LIBRARIES optimized ${LIBDIR}/tbb/lib/tbb.lib debug ${LIBDIR}/tbb/lib/tbb_debug.lib)
   set(TBB_INCLUDE_DIR ${LIBDIR}/tbb/include)
-  set(OPENVDB ${LIBDIR}/openvdb)
-  set(OPENVDB_LIBPATH ${LIBDIR}/openvdb/lib)
+  set(OPENVDB ${LIBDIR}/openVDB)
+  set(OPENVDB_LIBPATH ${OPENVDB}/lib)
   set(OPENVDB_INCLUDE_DIRS ${OPENVDB}/include ${TBB_INCLUDE_DIR})
   set(OPENVDB_LIBRARIES optimized ${OPENVDB_LIBPATH}/openvdb.lib debug ${OPENVDB_LIBPATH}/openvdb_d.lib ${TBB_LIBRARIES} ${BLOSC_LIBRARIES})
   set(OPENVDB_DEFINITIONS -DNOMINMAX)
 endif()
 
+if(WITH_OPENIMAGEDENOISE)
+  set(TBB_LIBRARIES optimized ${LIBDIR}/tbb/lib/tbb.lib debug ${LIBDIR}/tbb/lib/tbb_debug.lib)
+  set(TBB_INCLUDE_DIR ${LIBDIR}/tbb/include)
+  set(OPENIMAGEDENOISE ${LIBDIR}/OpenImageDenoise)
+  set(OPENIMAGEDENOISE_LIBPATH ${LIBDIR}/OpenImageDenoise/lib)
+  set(OPENIMAGEDENOISE_INCLUDE_DIRS ${OPENIMAGEDENOISE}/include ${TBB_INCLUDE_DIR})
+  set(OPENIMAGEDENOISE_LIBRARIES
+    optimized ${OPENIMAGEDENOISE_LIBPATH}/OpenImageDenoise.lib ${OPENIMAGEDENOISE_LIBPATH}/common.lib ${OPENIMAGEDENOISE_LIBPATH}/mkldnn.lib
+    debug ${OPENIMAGEDENOISE_LIBPATH}/OpenImageDenoise_d.lib ${OPENIMAGEDENOISE_LIBPATH}/common_d.lib ${OPENIMAGEDENOISE_LIBPATH}/mkldnn_d.lib
+    ${TBB_LIBRARIES})
+  set(OPENIMAGEDENOISE_DEFINITIONS)
+endif()
+
 if(WITH_ALEMBIC)
   set(ALEMBIC ${LIBDIR}/alembic)
   set(ALEMBIC_INCLUDE_DIR ${ALEMBIC}/include)
   set(ALEMBIC_INCLUDE_DIRS ${ALEMBIC_INCLUDE_DIR})
   set(ALEMBIC_LIBPATH ${ALEMBIC}/lib)
-  set(ALEMBIC_LIBRARIES optimized ${ALEMBIC}/lib/alembic.lib debug ${ALEMBIC}/lib/alembic_d.lib)
+  set(ALEMBIC_LIBRARIES optimized ${ALEMBIC}/lib/Alembic.lib debug ${ALEMBIC}/lib/Alembic_d.lib)
   set(ALEMBIC_FOUND 1)
 endif()
 

build_files/utils/make_test.py

@@ -0,0 +1,55 @@
+#!/usr/bin/env python3
+#
+# "make test" for all platforms, running automated tests.
+
+import argparse
+import os
+import shutil
+import sys
+
+import make_utils
+from make_utils import call
+
+# Parse arguments
+
+def parse_arguments():
+    parser = argparse.ArgumentParser()
+    parser.add_argument("--ctest-command", default="ctest")
+    parser.add_argument("--cmake-command", default="cmake")
+    parser.add_argument("--svn-command", default="svn")
+    parser.add_argument("--git-command", default="git")
+    parser.add_argument("build_directory")
+    return parser.parse_args()
+
+args = parse_arguments()
+git_command = args.git_command
+svn_command = args.svn_command
+ctest_command = args.ctest_command
+cmake_command = args.cmake_command
+build_dir = args.build_directory
+
+if shutil.which(ctest_command) is None:
+    sys.stderr.write("ctest not found, can't run tests\n")
+    sys.exit(1)
+
+# Test if we are building a specific release version.
+release_version = make_utils.git_branch_release_version(git_command)
+lib_tests_dirpath = os.path.join('..', 'lib', "tests")
+
+if not os.path.exists(lib_tests_dirpath):
+    print("Tests files not found, downloading...")
+
+    if shutil.which(svn_command) is None:
+        sys.stderr.write("svn not found, can't checkout test files\n")
+        sys.exit(1)
+
+    svn_url = make_utils.svn_libraries_base_url(release_version) + "/tests"
+    call([svn_command, "checkout", svn_url, lib_tests_dirpath])
+
+    # Run cmake again to detect tests files.
+    os.chdir(build_dir)
+    call([cmake_command, "."])
+
+# Run tests
+os.chdir(build_dir)
+call([ctest_command, ".", "--output-on-failure"])

build_files/utils/make_update.py

@@ -0,0 +1,107 @@
+#!/usr/bin/env python3
+#
+# "make update" for all platforms, updating svn libraries and tests and Blender
+# git repository and submodules.
+#
+# For release branches, this will check out the appropriate branches of
+# submodules and libraries.
+
+import argparse
+import os
+import shutil
+import sys
+
+import make_utils
+from make_utils import call
+
+# Parse arguments
+
+def parse_arguments():
+    parser = argparse.ArgumentParser()
+    parser.add_argument("--only-code", action="store_true")
+    parser.add_argument("--svn-command", default="svn")
+    parser.add_argument("--git-command", default="git")
+    return parser.parse_args()
+
+args = parse_arguments()
+only_code = args.only_code
+git_command = args.git_command
+svn_command = args.svn_command
+svn_non_interactive = [args.svn_command, '--non-interactive']
+
+def print_stage(text):
+    print("")
+    print(text)
+    print("")
+
+# Test if we are building a specific release version.
+release_version = make_utils.git_branch_release_version(git_command)
+
+# Setup for precompiled libraries and tests from svn.
+if not only_code:
+    lib_dirpath = os.path.join('..', 'lib')
+    svn_url = make_utils.svn_libraries_base_url(release_version)
+
+    # Checkout precompiled libraries
+    if sys.platform == 'darwin':
+        lib_platform = "darwin"
+    elif sys.platform == 'win32':
+        # Windows checkout is usually handled by bat scripts since python3 to run
+        # this script is bundled as part of the precompiled libraries. However it
+        # is used by the buildbot.
+        lib_platform = "win64_vc14"
+    else:
+        # No precompiled libraries for Linux.
+        lib_platform = None
+
+    if lib_platform:
+        lib_platform_dirpath = os.path.join(lib_dirpath, lib_platform)
+
+        if not os.path.exists(lib_platform_dirpath):
+            print_stage("Checking out Precompiled Libraries")
+
+            if shutil.which(svn_command) is None:
+                sys.stderr.write("svn not found, can't checkout libraries\n")
+                sys.exit(1)
+
+            svn_url_platform = svn_url + lib_platform
+            call(svn_non_interactive + ["checkout", svn_url_platform, lib_platform_dirpath])
+
+    # Update precompiled libraries and tests
+    print_stage("Updating Precompiled Libraries and Tests")
+
+    if os.path.isdir(lib_dirpath):
+      for dirname in os.listdir(lib_dirpath):
+        if dirname == ".svn":
+            continue
+
+        dirpath = os.path.join(lib_dirpath, dirname)
+        svn_dirpath = os.path.join(dirpath, ".svn")
+        svn_root_dirpath = os.path.join(lib_dirpath, ".svn")
+
+        if os.path.isdir(dirpath) and \
+           (os.path.exists(svn_dirpath) or os.path.exists(svn_root_dirpath)):
+            if shutil.which(svn_command) is None:
+                sys.stderr.write("svn not found, can't update libraries\n")
+                sys.exit(1)
+
+            call(svn_non_interactive + ["cleanup", dirpath])
+            call(svn_non_interactive + ["switch", svn_url + dirname, dirpath])
+            call(svn_non_interactive + ["update", dirpath])
+
+# Update blender repository and submodules.
+print_stage("Updating Blender Git Repository and Submodules")
+
+if shutil.which(git_command) is None:
+    sys.stderr.write("git not found, can't update code\n")
+    sys.exit(1)
+
+call([git_command, "pull", "--rebase"])
+call([git_command, "submodule", "update", "--init", "--recursive"])
+
+if not release_version:
+    # Update submodules to latest master if not building a specific release.
+    # In that case submodules are set to a specific revision, which is checked
+    # out by running "git submodule update".
+    call([git_command, "submodule", "foreach", "git", "checkout", "master"])
+    call([git_command, "submodule", "foreach", "git", "pull", "--rebase", "origin", "master"])

build_files/utils/make_utils.py

@@ -0,0 +1,39 @@
+#!/usr/bin/env python3
+#
+# Utility functions for make update and make tests.
+
+import re
+import subprocess
+import sys
+
+def call(cmd):
+    print(" ".join(cmd))
+
+    # Flush to ensure correct order output on Windows.
+    sys.stdout.flush()
+    sys.stderr.flush()
+
+    retcode = subprocess.call(cmd)
+    if retcode != 0:
+      sys.exit(retcode)
+
+def git_branch_release_version(git_command):
+    # Test if we are building a specific release version.
+    try:
+        branch = subprocess.check_output([git_command, "rev-parse", "--abbrev-ref", "HEAD"])
+    except subprocess.CalledProcessError as e:
+        sys.stderr.write("Failed to get Blender git branch\n")
+        sys.exit(1)
+
+    branch = branch.strip().decode('utf8')
+    release_version = re.search("^blender-v(.*)-release$", branch)
+    if release_version:
+        release_version = release_version.group(1)
+    return release_version
+
+def svn_libraries_base_url(release_version):
+    if release_version:
+        svn_branch = "tags/blender-" + release_version + "-release"
+    else:
+        svn_branch = "trunk"
+    return "https://svn.blender.org/svnroot/bf-blender/" + svn_branch + "/lib/"

build_files/windows/check_libraries.cmd

@@ -39,6 +39,15 @@ if NOT EXIST %BUILD_VS_LIBDIR% (
 			)
 		)
 	)
+) else (
+	if NOT EXIST %PYTHON% (
+		if not "%SVN%"=="" (
+			echo.
+			echo Python not found in external libraries, updating to latest version
+			echo.
+			"%SVN%" update %BUILD_VS_LIBDIR%
+		)
+	)
 )
 
 if NOT EXIST %BUILD_VS_LIBDIR% (

build_files/windows/find_dependencies.cmd

@@ -2,10 +2,12 @@ REM find all dependencies and set the corresponding environment variables.
 for %%X in (svn.exe) do (set SVN=%%~$PATH:X)
 for %%X in (cmake.exe) do (set CMAKE=%%~$PATH:X)
 for %%X in (git.exe) do (set GIT=%%~$PATH:X)
+set PYTHON=%BLENDER_DIR%\..\lib\win64_vc14\python\37\bin\python.exe
 if NOT "%verbose%" == "" (
-	echo svn   : "%SVN%"
-	echo cmake : "%CMAKE%"
-	echo git   : "%GIT%"
+	echo svn    : "%SVN%"
+	echo cmake  : "%CMAKE%"
+	echo git    : "%GIT%"
+	echo python : "%PYTHON%"
 )
 if "%CMAKE%" == "" (
 	echo Cmake not found in path, required for building, exiting...

build_files/windows/format.cmd

@@ -9,13 +9,23 @@ exit /b 1
 :detect_done
 echo found clang-format in %CF_PATH%
 
-REM TODO(sergey): Switch to Python from libraries when available.
-set PYTHON="python.exe"
+if EXIST %PYTHON% (
+    set PYTHON=%BLENDER_DIR%\..\lib\win64_vc14\python\37\bin\python.exe
+    goto detect_python_done
+)
+
+echo python not found in lib folder
+exit /b 1
+
+:detect_python_done
+echo found python (%PYTHON%)
+
 set FORMAT_PATHS=%BLENDER_DIR%\source\tools\utils_maintenance\clang_format_paths.py
 
 REM The formatting script expects clang-format to be in the current PATH.
 set PATH=%CF_PATH%;%PATH%
 
-%PYTHON% %FORMAT_PATHS% %FORMAT_ARGS%
+REM Use -B to avoid writing __pycache__ in lib directory and causing update conflicts.
+%PYTHON% -B %FORMAT_PATHS% %FORMAT_ARGS%
 
 :EOF

build_files/windows/parse_arguments.cmd

@@ -82,12 +82,10 @@ if NOT "%1" == "" (
 	REM Non-Build Commands
 	) else if "%1" == "update" (
 		SET BUILD_UPDATE=1
-		set BUILD_UPDATE_SVN=1
-		set BUILD_UPDATE_GIT=1
+		set BUILD_UPDATE_ARGS=
 	) else if "%1" == "code_update" (
 		SET BUILD_UPDATE=1
-		set BUILD_UPDATE_SVN=0
-		set BUILD_UPDATE_GIT=1
+		set BUILD_UPDATE_ARGS="--only-code"
 	) else if "%1" == "ninja" (
 		SET BUILD_WITH_NINJA=1
 	) else if "%1" == "clean" (
@@ -108,4 +106,4 @@ if NOT "%1" == "" (
 :EOF
 exit /b 0
 :ERR
-exit /b 1
+exit /b 1

build_files/windows/update_sources.cmd

@@ -1,18 +1,13 @@
-if "%BUILD_UPDATE_SVN%" == "1" (
-	if "%SVN%" == "" (
-		echo svn not found, cannot update libraries
-		goto UPDATE_GIT
-	)
-	"%SVN%" up "%BLENDER_DIR%/../lib/*"
+if EXIST %PYTHON% (
+	goto detect_python_done
 )
-:UPDATE_GIT
 
-if "%BUILD_UPDATE_GIT%" == "1" (
-	if "%GIT%" == "" (
-		echo Git not found, cannot update code
-		goto EOF
-	)
-	"%GIT%" pull --rebase
-	"%GIT%" submodule foreach git pull --rebase origin master
-)
+echo python not found in lib folder
+exit /b 1
+
+:detect_python_done
+
+REM Use -B to avoid writing __pycache__ in lib directory and causing update conflicts.
+%PYTHON% -B %BLENDER_DIR%\build_files\utils\make_update.py --git-command "%GIT%" --svn-command "%SVN%" %BUILD_UPDATE_ARGS%
+
 :EOF

extern/Eigen3/Eigen/Cholesky

@@ -1,7 +1,15 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_CHOLESKY_MODULE_H
 #define EIGEN_CHOLESKY_MODULE_H
 
 #include "Core"
+#include "Jacobi"
 
 #include "src/Core/util/DisableStupidWarnings.h"
 
@@ -10,20 +18,26 @@
   *
   *
   * This module provides two variants of the Cholesky decomposition for selfadjoint (hermitian) matrices.
-  * Those decompositions are accessible via the following MatrixBase methods:
-  *  - MatrixBase::llt(),
+  * Those decompositions are also accessible via the following methods:
+  *  - MatrixBase::llt()
   *  - MatrixBase::ldlt()
+  *  - SelfAdjointView::llt()
+  *  - SelfAdjointView::ldlt()
   *
   * \code
   * #include <Eigen/Cholesky>
   * \endcode
   */
 
-#include "src/misc/Solve.h"
 #include "src/Cholesky/LLT.h"
 #include "src/Cholesky/LDLT.h"
 #ifdef EIGEN_USE_LAPACKE
-#include "src/Cholesky/LLT_MKL.h"
+#ifdef EIGEN_USE_MKL
+#include "mkl_lapacke.h"
+#else
+#include "src/misc/lapacke.h"
+#endif
+#include "src/Cholesky/LLT_LAPACKE.h"
 #endif
 
 #include "src/Core/util/ReenableStupidWarnings.h"

extern/Eigen3/Eigen/CholmodSupport

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_CHOLMODSUPPORT_MODULE_H
 #define EIGEN_CHOLMODSUPPORT_MODULE_H
 
@@ -12,7 +19,7 @@ extern "C" {
 /** \ingroup Support_modules
   * \defgroup CholmodSupport_Module CholmodSupport module
   *
-  * This module provides an interface to the Cholmod library which is part of the <a href="http://www.cise.ufl.edu/research/sparse/SuiteSparse/">suitesparse</a> package.
+  * This module provides an interface to the Cholmod library which is part of the <a href="http://www.suitesparse.com">suitesparse</a> package.
   * It provides the two following main factorization classes:
   * - class CholmodSupernodalLLT: a supernodal LLT Cholesky factorization.
   * - class CholmodDecomposiiton: a general L(D)LT Cholesky factorization with automatic or explicit runtime selection of the underlying factorization method (supernodal or simplicial).
@@ -33,12 +40,8 @@ extern "C" {
   *
   */
 
-#include "src/misc/Solve.h"
-#include "src/misc/SparseSolve.h"
-
 #include "src/CholmodSupport/CholmodSupport.h"
 
-
 #include "src/Core/util/ReenableStupidWarnings.h"
 
 #endif // EIGEN_CHOLMODSUPPORT_MODULE_H

extern/Eigen3/Eigen/Core

@@ -14,6 +14,74 @@
 // first thing Eigen does: stop the compiler from committing suicide
 #include "src/Core/util/DisableStupidWarnings.h"
 
+#if defined(__CUDACC__) && !defined(EIGEN_NO_CUDA)
+  #define EIGEN_CUDACC __CUDACC__
+#endif
+
+#if defined(__CUDA_ARCH__) && !defined(EIGEN_NO_CUDA)
+  #define EIGEN_CUDA_ARCH __CUDA_ARCH__
+#endif
+
+#if defined(__CUDACC_VER_MAJOR__) && (__CUDACC_VER_MAJOR__ >= 9)
+#define EIGEN_CUDACC_VER  ((__CUDACC_VER_MAJOR__ * 10000) + (__CUDACC_VER_MINOR__ * 100))
+#elif defined(__CUDACC_VER__)
+#define EIGEN_CUDACC_VER __CUDACC_VER__
+#else
+#define EIGEN_CUDACC_VER 0
+#endif
+
+// Handle NVCC/CUDA/SYCL
+#if defined(__CUDACC__) || defined(__SYCL_DEVICE_ONLY__)
+  // Do not try asserts on CUDA and SYCL!
+  #ifndef EIGEN_NO_DEBUG
+  #define EIGEN_NO_DEBUG
+  #endif
+
+  #ifdef EIGEN_INTERNAL_DEBUGGING
+  #undef EIGEN_INTERNAL_DEBUGGING
+  #endif
+
+  #ifdef EIGEN_EXCEPTIONS
+  #undef EIGEN_EXCEPTIONS
+  #endif
+
+  // All functions callable from CUDA code must be qualified with __device__
+  #ifdef __CUDACC__
+    // Do not try to vectorize on CUDA and SYCL!
+    #ifndef EIGEN_DONT_VECTORIZE
+    #define EIGEN_DONT_VECTORIZE
+    #endif
+
+    #define EIGEN_DEVICE_FUNC __host__ __device__
+    // We need cuda_runtime.h to ensure that that EIGEN_USING_STD_MATH macro
+    // works properly on the device side
+    #include <cuda_runtime.h>
+  #else
+    #define EIGEN_DEVICE_FUNC
+  #endif
+
+#else
+  #define EIGEN_DEVICE_FUNC
+
+#endif
+
+// When compiling CUDA device code with NVCC, pull in math functions from the
+// global namespace.  In host mode, and when device doee with clang, use the
+// std versions.
+#if defined(__CUDA_ARCH__) && defined(__NVCC__)
+  #define EIGEN_USING_STD_MATH(FUNC) using ::FUNC;
+#else
+  #define EIGEN_USING_STD_MATH(FUNC) using std::FUNC;
+#endif
+
+#if (defined(_CPPUNWIND) || defined(__EXCEPTIONS)) && !defined(__CUDA_ARCH__) && !defined(EIGEN_EXCEPTIONS) && !defined(EIGEN_USE_SYCL)
+  #define EIGEN_EXCEPTIONS
+#endif
+
+#ifdef EIGEN_EXCEPTIONS
+  #include <new>
+#endif
+
 // then include this file where all our macros are defined. It's really important to do it first because
 // it's where we do all the alignment settings (platform detection and honoring the user's will if he
 // defined e.g. EIGEN_DONT_ALIGN) so it needs to be done before we do anything with vectorization.
@@ -21,7 +89,7 @@
 
 // Disable the ipa-cp-clone optimization flag with MinGW 6.x or newer (enabled by default with -O3)
 // See http://eigen.tuxfamily.org/bz/show_bug.cgi?id=556 for details.
-#if defined(__MINGW32__) && EIGEN_GNUC_AT_LEAST(4,6)
+#if EIGEN_COMP_MINGW && EIGEN_GNUC_AT_LEAST(4,6)
   #pragma GCC optimize ("-fno-ipa-cp-clone")
 #endif
 
@@ -31,26 +99,26 @@
 // and inclusion of their respective header files
 #include "src/Core/util/MKL_support.h"
 
-// if alignment is disabled, then disable vectorization. Note: EIGEN_ALIGN is the proper check, it takes into
-// account both the user's will (EIGEN_DONT_ALIGN) and our own platform checks
-#if !EIGEN_ALIGN
+// if alignment is disabled, then disable vectorization. Note: EIGEN_MAX_ALIGN_BYTES is the proper check, it takes into
+// account both the user's will (EIGEN_MAX_ALIGN_BYTES,EIGEN_DONT_ALIGN) and our own platform checks
+#if EIGEN_MAX_ALIGN_BYTES==0
   #ifndef EIGEN_DONT_VECTORIZE
     #define EIGEN_DONT_VECTORIZE
   #endif
 #endif
 
-#ifdef _MSC_VER
+#if EIGEN_COMP_MSVC
   #include <malloc.h> // for _aligned_malloc -- need it regardless of whether vectorization is enabled
-  #if (_MSC_VER >= 1500) // 2008 or later
+  #if (EIGEN_COMP_MSVC >= 1500) // 2008 or later
     // Remember that usage of defined() in a #define is undefined by the standard.
     // a user reported that in 64-bit mode, MSVC doesn't care to define _M_IX86_FP.
-    #if (defined(_M_IX86_FP) && (_M_IX86_FP >= 2)) || defined(_M_X64)
+    #if (defined(_M_IX86_FP) && (_M_IX86_FP >= 2)) || EIGEN_ARCH_x86_64
       #define EIGEN_SSE2_ON_MSVC_2008_OR_LATER
     #endif
   #endif
 #else
   // Remember that usage of defined() in a #define is undefined by the standard
-  #if (defined __SSE2__) && ( (!defined __GNUC__) || (defined __INTEL_COMPILER) || EIGEN_GNUC_AT_LEAST(4,2) )
+  #if (defined __SSE2__) && ( (!EIGEN_COMP_GNUC) || EIGEN_COMP_ICC || EIGEN_GNUC_AT_LEAST(4,2) )
     #define EIGEN_SSE2_ON_NON_MSVC_BUT_NOT_OLD_GCC
   #endif
 #endif
@@ -82,6 +150,31 @@
     #ifdef __SSE4_2__
       #define EIGEN_VECTORIZE_SSE4_2
     #endif
+    #ifdef __AVX__
+      #define EIGEN_VECTORIZE_AVX
+      #define EIGEN_VECTORIZE_SSE3
+      #define EIGEN_VECTORIZE_SSSE3
+      #define EIGEN_VECTORIZE_SSE4_1
+      #define EIGEN_VECTORIZE_SSE4_2
+    #endif
+    #ifdef __AVX2__
+      #define EIGEN_VECTORIZE_AVX2
+    #endif
+    #ifdef __FMA__
+      #define EIGEN_VECTORIZE_FMA
+    #endif
+    #if defined(__AVX512F__) && defined(EIGEN_ENABLE_AVX512)
+      #define EIGEN_VECTORIZE_AVX512
+      #define EIGEN_VECTORIZE_AVX2
+      #define EIGEN_VECTORIZE_AVX
+      #define EIGEN_VECTORIZE_FMA
+      #ifdef __AVX512DQ__
+        #define EIGEN_VECTORIZE_AVX512DQ
+      #endif
+      #ifdef __AVX512ER__
+        #define EIGEN_VECTORIZE_AVX512ER
+      #endif
+    #endif
 
     // include files
 
@@ -95,9 +188,10 @@
     extern "C" {
       // In theory we should only include immintrin.h and not the other *mmintrin.h header files directly.
       // Doing so triggers some issues with ICC. However old gcc versions seems to not have this file, thus:
-      #if defined(__INTEL_COMPILER) && __INTEL_COMPILER >= 1110
+      #if EIGEN_COMP_ICC >= 1110
         #include <immintrin.h>
       #else
+        #include <mmintrin.h>
         #include <emmintrin.h>
         #include <xmmintrin.h>
         #ifdef  EIGEN_VECTORIZE_SSE3
@@ -112,8 +206,20 @@
         #ifdef EIGEN_VECTORIZE_SSE4_2
         #include <nmmintrin.h>
         #endif
+        #if defined(EIGEN_VECTORIZE_AVX) || defined(EIGEN_VECTORIZE_AVX512)
+        #include <immintrin.h>
+        #endif
       #endif
     } // end extern "C"
+  #elif defined __VSX__
+    #define EIGEN_VECTORIZE
+    #define EIGEN_VECTORIZE_VSX
+    #include <altivec.h>
+    // We need to #undef all these ugly tokens defined in <altivec.h>
+    // => use __vector instead of vector
+    #undef bool
+    #undef vector
+    #undef pixel
   #elif defined __ALTIVEC__
     #define EIGEN_VECTORIZE
     #define EIGEN_VECTORIZE_ALTIVEC
@@ -123,13 +229,35 @@
     #undef bool
     #undef vector
     #undef pixel
-  #elif defined  __ARM_NEON
+  #elif (defined  __ARM_NEON) || (defined __ARM_NEON__)
     #define EIGEN_VECTORIZE
     #define EIGEN_VECTORIZE_NEON
     #include <arm_neon.h>
+  #elif (defined __s390x__ && defined __VEC__)
+    #define EIGEN_VECTORIZE
+    #define EIGEN_VECTORIZE_ZVECTOR
+    #include <vecintrin.h>
   #endif
 #endif
 
+#if defined(__F16C__) && !defined(EIGEN_COMP_CLANG)
+  // We can use the optimized fp16 to float and float to fp16 conversion routines
+  #define EIGEN_HAS_FP16_C
+#endif
+
+#if defined __CUDACC__
+  #define EIGEN_VECTORIZE_CUDA
+  #include <vector_types.h>
+  #if EIGEN_CUDACC_VER >= 70500
+    #define EIGEN_HAS_CUDA_FP16
+  #endif
+#endif
+
+#if defined EIGEN_HAS_CUDA_FP16
+  #include <host_defines.h>
+  #include <cuda_fp16.h>
+#endif
+
 #if (defined _OPENMP) && (!defined EIGEN_DONT_PARALLELIZE)
   #define EIGEN_HAS_OPENMP
 #endif
@@ -139,7 +267,7 @@
 #endif
 
 // MSVC for windows mobile does not have the errno.h file
-#if !(defined(_MSC_VER) && defined(_WIN32_WCE)) && !defined(__ARMCC_VERSION)
+#if !(EIGEN_COMP_MSVC && EIGEN_OS_WINCE) && !EIGEN_COMP_ARM
 #define EIGEN_HAS_ERRNO
 #endif
 
@@ -159,29 +287,30 @@
 // for min/max:
 #include <algorithm>
 
+// for std::is_nothrow_move_assignable
+#ifdef EIGEN_INCLUDE_TYPE_TRAITS
+#include <type_traits>
+#endif
+
 // for outputting debug info
 #ifdef EIGEN_DEBUG_ASSIGN
 #include <iostream>
 #endif
 
 // required for __cpuid, needs to be included after cmath
-#if defined(_MSC_VER) && (defined(_M_IX86)||defined(_M_X64)) && (!defined(_WIN32_WCE))
+#if EIGEN_COMP_MSVC && EIGEN_ARCH_i386_OR_x86_64 && !EIGEN_OS_WINCE
   #include <intrin.h>
 #endif
 
-#if defined(_CPPUNWIND) || defined(__EXCEPTIONS)
-  #define EIGEN_EXCEPTIONS
-#endif
-
-#ifdef EIGEN_EXCEPTIONS
-  #include <new>
-#endif
-
 /** \brief Namespace containing all symbols from the %Eigen library. */
 namespace Eigen {
 
 inline static const char *SimdInstructionSetsInUse(void) {
-#if defined(EIGEN_VECTORIZE_SSE4_2)
+#if defined(EIGEN_VECTORIZE_AVX512)
+  return "AVX512, FMA, AVX2, AVX, SSE, SSE2, SSE3, SSSE3, SSE4.1, SSE4.2";
+#elif defined(EIGEN_VECTORIZE_AVX)
+  return "AVX SSE, SSE2, SSE3, SSSE3, SSE4.1, SSE4.2";
+#elif defined(EIGEN_VECTORIZE_SSE4_2)
   return "SSE, SSE2, SSE3, SSSE3, SSE4.1, SSE4.2";
 #elif defined(EIGEN_VECTORIZE_SSE4_1)
   return "SSE, SSE2, SSE3, SSSE3, SSE4.1";
@@ -193,8 +322,12 @@ inline static const char *SimdInstructionSetsInUse(void) {
   return "SSE, SSE2";
 #elif defined(EIGEN_VECTORIZE_ALTIVEC)
   return "AltiVec";
+#elif defined(EIGEN_VECTORIZE_VSX)
+  return "VSX";
 #elif defined(EIGEN_VECTORIZE_NEON)
   return "ARM NEON";
+#elif defined(EIGEN_VECTORIZE_ZVECTOR)
+  return "S390X ZVECTOR";
 #else
   return "None";
 #endif
@@ -202,42 +335,21 @@ inline static const char *SimdInstructionSetsInUse(void) {
 
 } // end namespace Eigen
 
-#define STAGE10_FULL_EIGEN2_API             10
-#define STAGE20_RESOLVE_API_CONFLICTS       20
-#define STAGE30_FULL_EIGEN3_API             30
-#define STAGE40_FULL_EIGEN3_STRICTNESS      40
-#define STAGE99_NO_EIGEN2_SUPPORT           99
-
-#if   defined EIGEN2_SUPPORT_STAGE40_FULL_EIGEN3_STRICTNESS
-  #define EIGEN2_SUPPORT
-  #define EIGEN2_SUPPORT_STAGE STAGE40_FULL_EIGEN3_STRICTNESS
-#elif defined EIGEN2_SUPPORT_STAGE30_FULL_EIGEN3_API
-  #define EIGEN2_SUPPORT
-  #define EIGEN2_SUPPORT_STAGE STAGE30_FULL_EIGEN3_API
-#elif defined EIGEN2_SUPPORT_STAGE20_RESOLVE_API_CONFLICTS
-  #define EIGEN2_SUPPORT
-  #define EIGEN2_SUPPORT_STAGE STAGE20_RESOLVE_API_CONFLICTS
-#elif defined EIGEN2_SUPPORT_STAGE10_FULL_EIGEN2_API
-  #define EIGEN2_SUPPORT
-  #define EIGEN2_SUPPORT_STAGE STAGE10_FULL_EIGEN2_API
-#elif defined EIGEN2_SUPPORT
-  // default to stage 3, that's what it's always meant
-  #define EIGEN2_SUPPORT_STAGE30_FULL_EIGEN3_API
-  #define EIGEN2_SUPPORT_STAGE STAGE30_FULL_EIGEN3_API
-#else
-  #define EIGEN2_SUPPORT_STAGE STAGE99_NO_EIGEN2_SUPPORT
+#if defined EIGEN2_SUPPORT_STAGE40_FULL_EIGEN3_STRICTNESS || defined EIGEN2_SUPPORT_STAGE30_FULL_EIGEN3_API || defined EIGEN2_SUPPORT_STAGE20_RESOLVE_API_CONFLICTS || defined EIGEN2_SUPPORT_STAGE10_FULL_EIGEN2_API || defined EIGEN2_SUPPORT
+// This will generate an error message:
+#error Eigen2-support is only available up to version 3.2. Please go to "http://eigen.tuxfamily.org/index.php?title=Eigen2" for further information
 #endif
 
-#ifdef EIGEN2_SUPPORT
-#undef minor
-#endif
+namespace Eigen {
 
 // we use size_t frequently and we'll never remember to prepend it with std:: everytime just to
 // ensure QNX/QCC support
 using std::size_t;
-// gcc 4.6.0 wants std:: for ptrdiff_t 
+// gcc 4.6.0 wants std:: for ptrdiff_t
 using std::ptrdiff_t;
 
+}
+
 /** \defgroup Core_Module Core module
   * This is the main module of Eigen providing dense matrix and vector support
   * (both fixed and dynamic size) with all the features corresponding to a BLAS library
@@ -249,8 +361,8 @@ using std::ptrdiff_t;
   */
 
 #include "src/Core/util/Constants.h"
-#include "src/Core/util/ForwardDeclarations.h"
 #include "src/Core/util/Meta.h"
+#include "src/Core/util/ForwardDeclarations.h"
 #include "src/Core/util/StaticAssert.h"
 #include "src/Core/util/XprHelper.h"
 #include "src/Core/util/Memory.h"
@@ -258,41 +370,94 @@ using std::ptrdiff_t;
 #include "src/Core/NumTraits.h"
 #include "src/Core/MathFunctions.h"
 #include "src/Core/GenericPacketMath.h"
+#include "src/Core/MathFunctionsImpl.h"
+#include "src/Core/arch/Default/ConjHelper.h"
 
-#if defined EIGEN_VECTORIZE_SSE
+#if defined EIGEN_VECTORIZE_AVX512
+  #include "src/Core/arch/SSE/PacketMath.h"
+  #include "src/Core/arch/AVX/PacketMath.h"
+  #include "src/Core/arch/AVX512/PacketMath.h"
+  #include "src/Core/arch/AVX512/MathFunctions.h"
+#elif defined EIGEN_VECTORIZE_AVX
+  // Use AVX for floats and doubles, SSE for integers
+  #include "src/Core/arch/SSE/PacketMath.h"
+  #include "src/Core/arch/SSE/Complex.h"
+  #include "src/Core/arch/SSE/MathFunctions.h"
+  #include "src/Core/arch/AVX/PacketMath.h"
+  #include "src/Core/arch/AVX/MathFunctions.h"
+  #include "src/Core/arch/AVX/Complex.h"
+  #include "src/Core/arch/AVX/TypeCasting.h"
+  #include "src/Core/arch/SSE/TypeCasting.h"
+#elif defined EIGEN_VECTORIZE_SSE
   #include "src/Core/arch/SSE/PacketMath.h"
   #include "src/Core/arch/SSE/MathFunctions.h"
   #include "src/Core/arch/SSE/Complex.h"
-#elif defined EIGEN_VECTORIZE_ALTIVEC
+  #include "src/Core/arch/SSE/TypeCasting.h"
+#elif defined(EIGEN_VECTORIZE_ALTIVEC) || defined(EIGEN_VECTORIZE_VSX)
   #include "src/Core/arch/AltiVec/PacketMath.h"
+  #include "src/Core/arch/AltiVec/MathFunctions.h"
   #include "src/Core/arch/AltiVec/Complex.h"
 #elif defined EIGEN_VECTORIZE_NEON
   #include "src/Core/arch/NEON/PacketMath.h"
+  #include "src/Core/arch/NEON/MathFunctions.h"
   #include "src/Core/arch/NEON/Complex.h"
+#elif defined EIGEN_VECTORIZE_ZVECTOR
+  #include "src/Core/arch/ZVector/PacketMath.h"
+  #include "src/Core/arch/ZVector/MathFunctions.h"
+  #include "src/Core/arch/ZVector/Complex.h"
+#endif
+
+// Half float support
+#include "src/Core/arch/CUDA/Half.h"
+#include "src/Core/arch/CUDA/PacketMathHalf.h"
+#include "src/Core/arch/CUDA/TypeCasting.h"
+
+#if defined EIGEN_VECTORIZE_CUDA
+  #include "src/Core/arch/CUDA/PacketMath.h"
+  #include "src/Core/arch/CUDA/MathFunctions.h"
 #endif
 
 #include "src/Core/arch/Default/Settings.h"
 
-#include "src/Core/Functors.h"
+#include "src/Core/functors/TernaryFunctors.h"
+#include "src/Core/functors/BinaryFunctors.h"
+#include "src/Core/functors/UnaryFunctors.h"
+#include "src/Core/functors/NullaryFunctors.h"
+#include "src/Core/functors/StlFunctors.h"
+#include "src/Core/functors/AssignmentFunctors.h"
+
+// Specialized functors to enable the processing of complex numbers
+// on CUDA devices
+#include "src/Core/arch/CUDA/Complex.h"
+
+#include "src/Core/IO.h"
 #include "src/Core/DenseCoeffsBase.h"
 #include "src/Core/DenseBase.h"
 #include "src/Core/MatrixBase.h"
 #include "src/Core/EigenBase.h"
 
+#include "src/Core/Product.h"
+#include "src/Core/CoreEvaluators.h"
+#include "src/Core/AssignEvaluator.h"
+
 #ifndef EIGEN_PARSED_BY_DOXYGEN // work around Doxygen bug triggered by Assign.h r814874
                                 // at least confirmed with Doxygen 1.5.5 and 1.5.6
   #include "src/Core/Assign.h"
 #endif
 
+#include "src/Core/ArrayBase.h"
 #include "src/Core/util/BlasUtil.h"
 #include "src/Core/DenseStorage.h"
 #include "src/Core/NestByValue.h"
-#include "src/Core/ForceAlignedAccess.h"
+
+// #include "src/Core/ForceAlignedAccess.h"
+
 #include "src/Core/ReturnByValue.h"
 #include "src/Core/NoAlias.h"
 #include "src/Core/PlainObjectBase.h"
 #include "src/Core/Matrix.h"
 #include "src/Core/Array.h"
+#include "src/Core/CwiseTernaryOp.h"
 #include "src/Core/CwiseBinaryOp.h"
 #include "src/Core/CwiseUnaryOp.h"
 #include "src/Core/CwiseNullaryOp.h"
@@ -300,32 +465,32 @@ using std::ptrdiff_t;
 #include "src/Core/SelfCwiseBinaryOp.h"
 #include "src/Core/Dot.h"
 #include "src/Core/StableNorm.h"
-#include "src/Core/MapBase.h"
 #include "src/Core/Stride.h"
+#include "src/Core/MapBase.h"
 #include "src/Core/Map.h"
+#include "src/Core/Ref.h"
 #include "src/Core/Block.h"
 #include "src/Core/VectorBlock.h"
-#include "src/Core/Ref.h"
 #include "src/Core/Transpose.h"
 #include "src/Core/DiagonalMatrix.h"
 #include "src/Core/Diagonal.h"
 #include "src/Core/DiagonalProduct.h"
-#include "src/Core/PermutationMatrix.h"
-#include "src/Core/Transpositions.h"
 #include "src/Core/Redux.h"
 #include "src/Core/Visitor.h"
 #include "src/Core/Fuzzy.h"
-#include "src/Core/IO.h"
 #include "src/Core/Swap.h"
 #include "src/Core/CommaInitializer.h"
-#include "src/Core/Flagged.h"
-#include "src/Core/ProductBase.h"
 #include "src/Core/GeneralProduct.h"
+#include "src/Core/Solve.h"
+#include "src/Core/Inverse.h"
+#include "src/Core/SolverBase.h"
+#include "src/Core/PermutationMatrix.h"
+#include "src/Core/Transpositions.h"
 #include "src/Core/TriangularMatrix.h"
 #include "src/Core/SelfAdjointView.h"
 #include "src/Core/products/GeneralBlockPanelKernel.h"
 #include "src/Core/products/Parallelizer.h"
-#include "src/Core/products/CoeffBasedProduct.h"
+#include "src/Core/ProductEvaluators.h"
 #include "src/Core/products/GeneralMatrixVector.h"
 #include "src/Core/products/GeneralMatrixMatrix.h"
 #include "src/Core/SolveTriangular.h"
@@ -340,6 +505,7 @@ using std::ptrdiff_t;
 #include "src/Core/products/TriangularSolverVector.h"
 #include "src/Core/BandMatrix.h"
 #include "src/Core/CoreIterators.h"
+#include "src/Core/ConditionEstimator.h"
 
 #include "src/Core/BooleanRedux.h"
 #include "src/Core/Select.h"
@@ -347,18 +513,17 @@ using std::ptrdiff_t;
 #include "src/Core/Random.h"
 #include "src/Core/Replicate.h"
 #include "src/Core/Reverse.h"
-#include "src/Core/ArrayBase.h"
 #include "src/Core/ArrayWrapper.h"
 
 #ifdef EIGEN_USE_BLAS
-#include "src/Core/products/GeneralMatrixMatrix_MKL.h"
-#include "src/Core/products/GeneralMatrixVector_MKL.h"
-#include "src/Core/products/GeneralMatrixMatrixTriangular_MKL.h"
-#include "src/Core/products/SelfadjointMatrixMatrix_MKL.h"
-#include "src/Core/products/SelfadjointMatrixVector_MKL.h"
-#include "src/Core/products/TriangularMatrixMatrix_MKL.h"
-#include "src/Core/products/TriangularMatrixVector_MKL.h"
-#include "src/Core/products/TriangularSolverMatrix_MKL.h"
+#include "src/Core/products/GeneralMatrixMatrix_BLAS.h"
+#include "src/Core/products/GeneralMatrixVector_BLAS.h"
+#include "src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h"
+#include "src/Core/products/SelfadjointMatrixMatrix_BLAS.h"
+#include "src/Core/products/SelfadjointMatrixVector_BLAS.h"
+#include "src/Core/products/TriangularMatrixMatrix_BLAS.h"
+#include "src/Core/products/TriangularMatrixVector_BLAS.h"
+#include "src/Core/products/TriangularSolverMatrix_BLAS.h"
 #endif // EIGEN_USE_BLAS
 
 #ifdef EIGEN_USE_MKL_VML
@@ -369,8 +534,4 @@ using std::ptrdiff_t;
 
 #include "src/Core/util/ReenableStupidWarnings.h"
 
-#ifdef EIGEN2_SUPPORT
-#include "Eigen2Support"
-#endif
-
 #endif // EIGEN_CORE_H

extern/Eigen3/Eigen/Eigen

@@ -1,2 +1,2 @@
 #include "Dense"
-//#include "Sparse"
+#include "Sparse"

extern/Eigen3/Eigen/Eigenvalues

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_EIGENVALUES_MODULE_H
 #define EIGEN_EIGENVALUES_MODULE_H
 
@@ -25,6 +32,7 @@
   * \endcode
   */
 
+#include "src/misc/RealSvd2x2.h"
 #include "src/Eigenvalues/Tridiagonalization.h"
 #include "src/Eigenvalues/RealSchur.h"
 #include "src/Eigenvalues/EigenSolver.h"
@@ -37,9 +45,14 @@
 #include "src/Eigenvalues/GeneralizedEigenSolver.h"
 #include "src/Eigenvalues/MatrixBaseEigenvalues.h"
 #ifdef EIGEN_USE_LAPACKE
-#include "src/Eigenvalues/RealSchur_MKL.h"
-#include "src/Eigenvalues/ComplexSchur_MKL.h"
-#include "src/Eigenvalues/SelfAdjointEigenSolver_MKL.h"
+#ifdef EIGEN_USE_MKL
+#include "mkl_lapacke.h"
+#else
+#include "src/misc/lapacke.h"
+#endif
+#include "src/Eigenvalues/RealSchur_LAPACKE.h"
+#include "src/Eigenvalues/ComplexSchur_LAPACKE.h"
+#include "src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h"
 #endif
 
 #include "src/Core/util/ReenableStupidWarnings.h"

extern/Eigen3/Eigen/Geometry

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_GEOMETRY_MODULE_H
 #define EIGEN_GEOMETRY_MODULE_H
 
@@ -9,21 +16,17 @@
 #include "LU"
 #include <limits>
 
-#ifndef M_PI
-#define M_PI 3.14159265358979323846
-#endif
-
 /** \defgroup Geometry_Module Geometry module
-  *
-  *
   *
   * This module provides support for:
   *  - fixed-size homogeneous transformations
   *  - translation, scaling, 2D and 3D rotations
-  *  - quaternions
-  *  - \ref MatrixBase::cross() "cross product"
-  *  - \ref MatrixBase::unitOrthogonal() "orthognal vector generation"
-  *  - some linear components: parametrized-lines and hyperplanes
+  *  - \link Quaternion quaternions \endlink
+  *  - cross products (\ref MatrixBase::cross, \ref MatrixBase::cross3)
+  *  - orthognal vector generation (\ref MatrixBase::unitOrthogonal)
+  *  - some linear components: \link ParametrizedLine parametrized-lines \endlink and \link Hyperplane hyperplanes \endlink
+  *  - \link AlignedBox axis aligned bounding boxes \endlink
+  *  - \link umeyama least-square transformation fitting \endlink
   *
   * \code
   * #include <Eigen/Geometry>
@@ -33,27 +36,23 @@
 #include "src/Geometry/OrthoMethods.h"
 #include "src/Geometry/EulerAngles.h"
 
-#if EIGEN2_SUPPORT_STAGE > STAGE20_RESOLVE_API_CONFLICTS
-  #include "src/Geometry/Homogeneous.h"
-  #include "src/Geometry/RotationBase.h"
-  #include "src/Geometry/Rotation2D.h"
-  #include "src/Geometry/Quaternion.h"
-  #include "src/Geometry/AngleAxis.h"
-  #include "src/Geometry/Transform.h"
-  #include "src/Geometry/Translation.h"
-  #include "src/Geometry/Scaling.h"
-  #include "src/Geometry/Hyperplane.h"
-  #include "src/Geometry/ParametrizedLine.h"
-  #include "src/Geometry/AlignedBox.h"
-  #include "src/Geometry/Umeyama.h"
+#include "src/Geometry/Homogeneous.h"
+#include "src/Geometry/RotationBase.h"
+#include "src/Geometry/Rotation2D.h"
+#include "src/Geometry/Quaternion.h"
+#include "src/Geometry/AngleAxis.h"
+#include "src/Geometry/Transform.h"
+#include "src/Geometry/Translation.h"
+#include "src/Geometry/Scaling.h"
+#include "src/Geometry/Hyperplane.h"
+#include "src/Geometry/ParametrizedLine.h"
+#include "src/Geometry/AlignedBox.h"
+#include "src/Geometry/Umeyama.h"
 
-  #if defined EIGEN_VECTORIZE_SSE
-    #include "src/Geometry/arch/Geometry_SSE.h"
-  #endif
-#endif
-
-#ifdef EIGEN2_SUPPORT
-#include "src/Eigen2Support/Geometry/All.h"
+// Use the SSE optimized version whenever possible. At the moment the
+// SSE version doesn't compile when AVX is enabled
+#if defined EIGEN_VECTORIZE_SSE && !defined EIGEN_VECTORIZE_AVX
+#include "src/Geometry/arch/Geometry_SSE.h"
 #endif
 
 #include "src/Core/util/ReenableStupidWarnings.h"

extern/Eigen3/Eigen/Householder

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_HOUSEHOLDER_MODULE_H
 #define EIGEN_HOUSEHOLDER_MODULE_H
 

extern/Eigen3/Eigen/IterativeLinearSolvers

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_ITERATIVELINEARSOLVERS_MODULE_H
 #define EIGEN_ITERATIVELINEARSOLVERS_MODULE_H
 
@@ -12,28 +19,29 @@
   * This module currently provides iterative methods to solve problems of the form \c A \c x = \c b, where \c A is a squared matrix, usually very large and sparse.
   * Those solvers are accessible via the following classes:
   *  - ConjugateGradient for selfadjoint (hermitian) matrices,
+  *  - LeastSquaresConjugateGradient for rectangular least-square problems,
   *  - BiCGSTAB for general square matrices.
   *
   * These iterative solvers are associated with some preconditioners:
   *  - IdentityPreconditioner - not really useful
-  *  - DiagonalPreconditioner - also called JAcobi preconditioner, work very well on diagonal dominant matrices.
-  *  - IncompleteILUT - incomplete LU factorization with dual thresholding
+  *  - DiagonalPreconditioner - also called Jacobi preconditioner, work very well on diagonal dominant matrices.
+  *  - IncompleteLUT - incomplete LU factorization with dual thresholding
   *
   * Such problems can also be solved using the direct sparse decomposition modules: SparseCholesky, CholmodSupport, UmfPackSupport, SuperLUSupport.
   *
-  * \code
-  * #include <Eigen/IterativeLinearSolvers>
-  * \endcode
+    \code
+    #include <Eigen/IterativeLinearSolvers>
+    \endcode
   */
 
-#include "src/misc/Solve.h"
-#include "src/misc/SparseSolve.h"
-
+#include "src/IterativeLinearSolvers/SolveWithGuess.h"
 #include "src/IterativeLinearSolvers/IterativeSolverBase.h"
 #include "src/IterativeLinearSolvers/BasicPreconditioners.h"
 #include "src/IterativeLinearSolvers/ConjugateGradient.h"
+#include "src/IterativeLinearSolvers/LeastSquareConjugateGradient.h"
 #include "src/IterativeLinearSolvers/BiCGSTAB.h"
 #include "src/IterativeLinearSolvers/IncompleteLUT.h"
+#include "src/IterativeLinearSolvers/IncompleteCholesky.h"
 
 #include "src/Core/util/ReenableStupidWarnings.h"
 

extern/Eigen3/Eigen/Jacobi

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_JACOBI_MODULE_H
 #define EIGEN_JACOBI_MODULE_H
 

extern/Eigen3/Eigen/LU

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_LU_MODULE_H
 #define EIGEN_LU_MODULE_H
 
@@ -16,25 +23,27 @@
   * \endcode
   */
 
-#include "src/misc/Solve.h"
 #include "src/misc/Kernel.h"
 #include "src/misc/Image.h"
 #include "src/LU/FullPivLU.h"
 #include "src/LU/PartialPivLU.h"
 #ifdef EIGEN_USE_LAPACKE
-#include "src/LU/PartialPivLU_MKL.h"
+#ifdef EIGEN_USE_MKL
+#include "mkl_lapacke.h"
+#else
+#include "src/misc/lapacke.h"
+#endif
+#include "src/LU/PartialPivLU_LAPACKE.h"
 #endif
 #include "src/LU/Determinant.h"
-#include "src/LU/Inverse.h"
+#include "src/LU/InverseImpl.h"
 
-#if defined EIGEN_VECTORIZE_SSE
+// Use the SSE optimized version whenever possible. At the moment the
+// SSE version doesn't compile when AVX is enabled
+#if defined EIGEN_VECTORIZE_SSE && !defined EIGEN_VECTORIZE_AVX
   #include "src/LU/arch/Inverse_SSE.h"
 #endif
 
-#ifdef EIGEN2_SUPPORT
-  #include "src/Eigen2Support/LU.h"
-#endif
-
 #include "src/Core/util/ReenableStupidWarnings.h"
 
 #endif // EIGEN_LU_MODULE_H

extern/Eigen3/Eigen/MetisSupport

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_METISSUPPORT_MODULE_H
 #define EIGEN_METISSUPPORT_MODULE_H
 

extern/Eigen3/Eigen/OrderingMethods

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_ORDERINGMETHODS_MODULE_H
 #define EIGEN_ORDERINGMETHODS_MODULE_H
 

extern/Eigen3/Eigen/PaStiXSupport

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_PASTIXSUPPORT_MODULE_H
 #define EIGEN_PASTIXSUPPORT_MODULE_H
 
@@ -5,7 +12,6 @@
 
 #include "src/Core/util/DisableStupidWarnings.h"
 
-#include <complex.h>
 extern "C" {
 #include <pastix_nompi.h>
 #include <pastix.h>
@@ -35,12 +41,8 @@ extern "C" {
   *
   */
 
-#include "src/misc/Solve.h"
-#include "src/misc/SparseSolve.h"
-
 #include "src/PaStiXSupport/PaStiXSupport.h"
 
-
 #include "src/Core/util/ReenableStupidWarnings.h"
 
 #endif // EIGEN_PASTIXSUPPORT_MODULE_H

extern/Eigen3/Eigen/PardisoSupport

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_PARDISOSUPPORT_MODULE_H
 #define EIGEN_PARDISOSUPPORT_MODULE_H
 
@@ -7,8 +14,6 @@
 
 #include <mkl_pardiso.h>
 
-#include <unsupported/Eigen/SparseExtra>
-
 /** \ingroup Support_modules
   * \defgroup PardisoSupport_Module PardisoSupport module
   *

extern/Eigen3/Eigen/QR

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_QR_MODULE_H
 #define EIGEN_QR_MODULE_H
 
@@ -15,31 +22,30 @@
   *
   * This module provides various QR decompositions
   * This module also provides some MatrixBase methods, including:
-  *  - MatrixBase::qr(),
+  *  - MatrixBase::householderQr()
+  *  - MatrixBase::colPivHouseholderQr()
+  *  - MatrixBase::fullPivHouseholderQr()
   *
   * \code
   * #include <Eigen/QR>
   * \endcode
   */
 
-#include "src/misc/Solve.h"
 #include "src/QR/HouseholderQR.h"
 #include "src/QR/FullPivHouseholderQR.h"
 #include "src/QR/ColPivHouseholderQR.h"
+#include "src/QR/CompleteOrthogonalDecomposition.h"
 #ifdef EIGEN_USE_LAPACKE
-#include "src/QR/HouseholderQR_MKL.h"
-#include "src/QR/ColPivHouseholderQR_MKL.h"
+#ifdef EIGEN_USE_MKL
+#include "mkl_lapacke.h"
+#else
+#include "src/misc/lapacke.h"
 #endif
-
-#ifdef EIGEN2_SUPPORT
-#include "src/Eigen2Support/QR.h"
+#include "src/QR/HouseholderQR_LAPACKE.h"
+#include "src/QR/ColPivHouseholderQR_LAPACKE.h"
 #endif
 
 #include "src/Core/util/ReenableStupidWarnings.h"
 
-#ifdef EIGEN2_SUPPORT
-#include "Eigenvalues"
-#endif
-
 #endif // EIGEN_QR_MODULE_H
 /* vim: set filetype=cpp et sw=2 ts=2 ai: */

extern/Eigen3/Eigen/QtAlignedMalloc

@@ -1,3 +1,9 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
 
 #ifndef EIGEN_QTMALLOC_MODULE_H
 #define EIGEN_QTMALLOC_MODULE_H
@@ -8,7 +14,7 @@
 
 #include "src/Core/util/DisableStupidWarnings.h"
 
-void *qMalloc(size_t size)
+void *qMalloc(std::size_t size)
 {
   return Eigen::internal::aligned_malloc(size);
 }
@@ -18,10 +24,10 @@ void qFree(void *ptr)
   Eigen::internal::aligned_free(ptr);
 }
 
-void *qRealloc(void *ptr, size_t size)
+void *qRealloc(void *ptr, std::size_t size)
 {
   void* newPtr = Eigen::internal::aligned_malloc(size);
-  memcpy(newPtr, ptr, size);
+  std::memcpy(newPtr, ptr, size);
   Eigen::internal::aligned_free(ptr);
   return newPtr;
 }

extern/Eigen3/Eigen/SPQRSupport

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_SPQRSUPPORT_MODULE_H
 #define EIGEN_SPQRSUPPORT_MODULE_H
 
@@ -10,7 +17,7 @@
 /** \ingroup Support_modules
   * \defgroup SPQRSupport_Module SuiteSparseQR module
   * 
-  * This module provides an interface to the SPQR library, which is part of the <a href="http://www.cise.ufl.edu/research/sparse/SuiteSparse/">suitesparse</a> package.
+  * This module provides an interface to the SPQR library, which is part of the <a href="http://www.suitesparse.com">suitesparse</a> package.
   *
   * \code
   * #include <Eigen/SPQRSupport>
@@ -21,8 +28,6 @@
   *
   */
 
-#include "src/misc/Solve.h"
-#include "src/misc/SparseSolve.h"
 #include "src/CholmodSupport/CholmodSupport.h"
 #include "src/SPQRSupport/SuiteSparseQRSupport.h"
 

extern/Eigen3/Eigen/SVD

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_SVD_MODULE_H
 #define EIGEN_SVD_MODULE_H
 
@@ -12,23 +19,30 @@
   *
   *
   * This module provides SVD decomposition for matrices (both real and complex).
-  * This decomposition is accessible via the following MatrixBase method:
+  * Two decomposition algorithms are provided:
+  *  - JacobiSVD implementing two-sided Jacobi iterations is numerically very accurate, fast for small matrices, but very slow for larger ones.
+  *  - BDCSVD implementing a recursive divide & conquer strategy on top of an upper-bidiagonalization which remains fast for large problems.
+  * These decompositions are accessible via the respective classes and following MatrixBase methods:
   *  - MatrixBase::jacobiSvd()
+  *  - MatrixBase::bdcSvd()
   *
   * \code
   * #include <Eigen/SVD>
   * \endcode
   */
 
-#include "src/misc/Solve.h"
-#include "src/SVD/JacobiSVD.h"
-#if defined(EIGEN_USE_LAPACKE) && !defined(EIGEN_USE_LAPACKE_STRICT)
-#include "src/SVD/JacobiSVD_MKL.h"
-#endif
+#include "src/misc/RealSvd2x2.h"
 #include "src/SVD/UpperBidiagonalization.h"
-
-#ifdef EIGEN2_SUPPORT
-#include "src/Eigen2Support/SVD.h"
+#include "src/SVD/SVDBase.h"
+#include "src/SVD/JacobiSVD.h"
+#include "src/SVD/BDCSVD.h"
+#if defined(EIGEN_USE_LAPACKE) && !defined(EIGEN_USE_LAPACKE_STRICT)
+#ifdef EIGEN_USE_MKL
+#include "mkl_lapacke.h"
+#else
+#include "src/misc/lapacke.h"
+#endif
+#include "src/SVD/JacobiSVD_LAPACKE.h"
 #endif
 
 #include "src/Core/util/ReenableStupidWarnings.h"

extern/Eigen3/Eigen/Sparse

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_SPARSE_MODULE_H
 #define EIGEN_SPARSE_MODULE_H
 
@@ -11,14 +18,16 @@
   * - \ref SparseQR_Module
   * - \ref IterativeLinearSolvers_Module
   *
-  * \code
-  * #include <Eigen/Sparse>
-  * \endcode
+    \code
+    #include <Eigen/Sparse>
+    \endcode
   */
 
 #include "SparseCore"
 #include "OrderingMethods"
+#ifndef EIGEN_MPL2_ONLY
 #include "SparseCholesky"
+#endif
 #include "SparseLU"
 #include "SparseQR"
 #include "IterativeLinearSolvers"

extern/Eigen3/Eigen/SparseCholesky

@@ -34,8 +34,6 @@
 #error The SparseCholesky module has nothing to offer in MPL2 only mode
 #endif
 
-#include "src/misc/Solve.h"
-#include "src/misc/SparseSolve.h"
 #include "src/SparseCholesky/SimplicialCholesky.h"
 
 #ifndef EIGEN_MPL2_ONLY

extern/Eigen3/Eigen/SparseCore

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_SPARSECORE_MODULE_H
 #define EIGEN_SPARSECORE_MODULE_H
 
@@ -26,37 +33,35 @@
   * This module depends on: Core.
   */
 
-namespace Eigen {
-
-/** The type used to identify a general sparse storage. */
-struct Sparse {};
-
-}
-
 #include "src/SparseCore/SparseUtil.h"
 #include "src/SparseCore/SparseMatrixBase.h"
+#include "src/SparseCore/SparseAssign.h"
 #include "src/SparseCore/CompressedStorage.h"
 #include "src/SparseCore/AmbiVector.h"
+#include "src/SparseCore/SparseCompressedBase.h"
 #include "src/SparseCore/SparseMatrix.h"
+#include "src/SparseCore/SparseMap.h"
 #include "src/SparseCore/MappedSparseMatrix.h"
 #include "src/SparseCore/SparseVector.h"
-#include "src/SparseCore/SparseBlock.h"
-#include "src/SparseCore/SparseTranspose.h"
+#include "src/SparseCore/SparseRef.h"
 #include "src/SparseCore/SparseCwiseUnaryOp.h"
 #include "src/SparseCore/SparseCwiseBinaryOp.h"
+#include "src/SparseCore/SparseTranspose.h"
+#include "src/SparseCore/SparseBlock.h"
 #include "src/SparseCore/SparseDot.h"
-#include "src/SparseCore/SparsePermutation.h"
 #include "src/SparseCore/SparseRedux.h"
-#include "src/SparseCore/SparseFuzzy.h"
+#include "src/SparseCore/SparseView.h"
+#include "src/SparseCore/SparseDiagonalProduct.h"
 #include "src/SparseCore/ConservativeSparseSparseProduct.h"
 #include "src/SparseCore/SparseSparseProductWithPruning.h"
 #include "src/SparseCore/SparseProduct.h"
 #include "src/SparseCore/SparseDenseProduct.h"
-#include "src/SparseCore/SparseDiagonalProduct.h"
-#include "src/SparseCore/SparseTriangularView.h"
 #include "src/SparseCore/SparseSelfAdjointView.h"
+#include "src/SparseCore/SparseTriangularView.h"
 #include "src/SparseCore/TriangularSolver.h"
-#include "src/SparseCore/SparseView.h"
+#include "src/SparseCore/SparsePermutation.h"
+#include "src/SparseCore/SparseFuzzy.h"
+#include "src/SparseCore/SparseSolverBase.h"
 
 #include "src/Core/util/ReenableStupidWarnings.h"
 

extern/Eigen3/Eigen/SparseLU

@@ -20,9 +20,6 @@
   * Please, see the documentation of the SparseLU class for more details.
   */
 
-#include "src/misc/Solve.h"
-#include "src/misc/SparseSolve.h"
-
 // Ordering interface
 #include "OrderingMethods"
 

extern/Eigen3/Eigen/SparseQR

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_SPARSEQR_MODULE_H
 #define EIGEN_SPARSEQR_MODULE_H
 
@@ -21,9 +28,6 @@
   * 
   */
 
-#include "src/misc/Solve.h"
-#include "src/misc/SparseSolve.h"
-
 #include "OrderingMethods"
 #include "src/SparseCore/SparseColEtree.h"
 #include "src/SparseQR/SparseQR.h"

extern/Eigen3/Eigen/StdDeque

@@ -14,7 +14,7 @@
 #include "Core"
 #include <deque>
 
-#if (defined(_MSC_VER) && defined(_WIN64)) /* MSVC auto aligns in 64 bit builds */
+#if EIGEN_COMP_MSVC && EIGEN_OS_WIN64 && (EIGEN_MAX_STATIC_ALIGN_BYTES<=16) /* MSVC auto aligns up to 16 bytes in 64 bit builds */
 
 #define EIGEN_DEFINE_STL_DEQUE_SPECIALIZATION(...)
 

extern/Eigen3/Eigen/StdList

@@ -13,7 +13,7 @@
 #include "Core"
 #include <list>
 
-#if (defined(_MSC_VER) && defined(_WIN64)) /* MSVC auto aligns in 64 bit builds */    
+#if EIGEN_COMP_MSVC && EIGEN_OS_WIN64 && (EIGEN_MAX_STATIC_ALIGN_BYTES<=16) /* MSVC auto aligns up to 16 bytes in 64 bit builds */
 
 #define EIGEN_DEFINE_STL_LIST_SPECIALIZATION(...)
 

extern/Eigen3/Eigen/StdVector

@@ -14,7 +14,7 @@
 #include "Core"
 #include <vector>
 
-#if (defined(_MSC_VER) && defined(_WIN64)) /* MSVC auto aligns in 64 bit builds */
+#if EIGEN_COMP_MSVC && EIGEN_OS_WIN64 && (EIGEN_MAX_STATIC_ALIGN_BYTES<=16) /* MSVC auto aligns up to 16 bytes in 64 bit builds */
 
 #define EIGEN_DEFINE_STL_VECTOR_SPECIALIZATION(...)
 

extern/Eigen3/Eigen/SuperLUSupport

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_SUPERLUSUPPORT_MODULE_H
 #define EIGEN_SUPERLUSUPPORT_MODULE_H
 
@@ -36,6 +43,8 @@ namespace Eigen { struct SluMatrix; }
   * - class SuperLU: a supernodal sequential LU factorization.
   * - class SuperILU: a supernodal sequential incomplete LU factorization (to be used as a preconditioner for iterative methods).
   *
+  * \warning This wrapper requires at least versions 4.0 of SuperLU. The 3.x versions are not supported.
+  *
   * \warning When including this module, you have to use SUPERLU_EMPTY instead of EMPTY which is no longer defined because it is too polluting.
   *
   * \code
@@ -48,12 +57,8 @@ namespace Eigen { struct SluMatrix; }
   *
   */
 
-#include "src/misc/Solve.h"
-#include "src/misc/SparseSolve.h"
-
 #include "src/SuperLUSupport/SuperLUSupport.h"
 
-
 #include "src/Core/util/ReenableStupidWarnings.h"
 
 #endif // EIGEN_SUPERLUSUPPORT_MODULE_H

extern/Eigen3/Eigen/UmfPackSupport

@@ -1,3 +1,10 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
 #ifndef EIGEN_UMFPACKSUPPORT_MODULE_H
 #define EIGEN_UMFPACKSUPPORT_MODULE_H
 
@@ -12,7 +19,7 @@ extern "C" {
 /** \ingroup Support_modules
   * \defgroup UmfPackSupport_Module UmfPackSupport module
   *
-  * This module provides an interface to the UmfPack library which is part of the <a href="http://www.cise.ufl.edu/research/sparse/SuiteSparse/">suitesparse</a> package.
+  * This module provides an interface to the UmfPack library which is part of the <a href="http://www.suitesparse.com">suitesparse</a> package.
   * It provides the following factorization class:
   * - class UmfPackLU: a multifrontal sequential LU factorization.
   *
@@ -26,9 +33,6 @@ extern "C" {
   *
   */
 
-#include "src/misc/Solve.h"
-#include "src/misc/SparseSolve.h"
-
 #include "src/UmfPackSupport/UmfPackSupport.h"
 
 #include "src/Core/util/ReenableStupidWarnings.h"

extern/Eigen3/Eigen/src/Cholesky/LDLT.h

@@ -13,7 +13,7 @@
 #ifndef EIGEN_LDLT_H
 #define EIGEN_LDLT_H
 
-namespace Eigen { 
+namespace Eigen {
 
 namespace internal {
   template<typename MatrixType, int UpLo> struct LDLT_Traits;
@@ -28,8 +28,8 @@ namespace internal {
   *
   * \brief Robust Cholesky decomposition of a matrix with pivoting
   *
-  * \param MatrixType the type of the matrix of which to compute the LDL^T Cholesky decomposition
-  * \param UpLo the triangular part that will be used for the decompositon: Lower (default) or Upper.
+  * \tparam _MatrixType the type of the matrix of which to compute the LDL^T Cholesky decomposition
+  * \tparam _UpLo the triangular part that will be used for the decompositon: Lower (default) or Upper.
   *             The other triangular part won't be read.
   *
   * Perform a robust Cholesky decomposition of a positive semidefinite or negative semidefinite
@@ -43,7 +43,9 @@ namespace internal {
   * Remember that Cholesky decompositions are not rank-revealing. Also, do not use a Cholesky
   * decomposition to determine whether a system of equations has a solution.
   *
-  * \sa MatrixBase::ldlt(), class LLT
+  * This class supports the \link InplaceDecomposition inplace decomposition \endlink mechanism.
+  * 
+  * \sa MatrixBase::ldlt(), SelfAdjointView::ldlt(), class LLT
   */
 template<typename _MatrixType, int _UpLo> class LDLT
 {
@@ -52,15 +54,15 @@ template<typename _MatrixType, int _UpLo> class LDLT
     enum {
       RowsAtCompileTime = MatrixType::RowsAtCompileTime,
       ColsAtCompileTime = MatrixType::ColsAtCompileTime,
-      Options = MatrixType::Options & ~RowMajorBit, // these are the options for the TmpMatrixType, we need a ColMajor matrix here!
       MaxRowsAtCompileTime = MatrixType::MaxRowsAtCompileTime,
       MaxColsAtCompileTime = MatrixType::MaxColsAtCompileTime,
       UpLo = _UpLo
     };
     typedef typename MatrixType::Scalar Scalar;
     typedef typename NumTraits<typename MatrixType::Scalar>::Real RealScalar;
-    typedef typename MatrixType::Index Index;
-    typedef Matrix<Scalar, RowsAtCompileTime, 1, Options, MaxRowsAtCompileTime, 1> TmpMatrixType;
+    typedef Eigen::Index Index; ///< \deprecated since Eigen 3.3
+    typedef typename MatrixType::StorageIndex StorageIndex;
+    typedef Matrix<Scalar, RowsAtCompileTime, 1, 0, MaxRowsAtCompileTime, 1> TmpMatrixType;
 
     typedef Transpositions<RowsAtCompileTime, MaxRowsAtCompileTime> TranspositionType;
     typedef PermutationMatrix<RowsAtCompileTime, MaxRowsAtCompileTime> PermutationType;
@@ -72,11 +74,11 @@ template<typename _MatrixType, int _UpLo> class LDLT
       * The default constructor is useful in cases in which the user intends to
       * perform decompositions via LDLT::compute(const MatrixType&).
       */
-    LDLT() 
-      : m_matrix(), 
-        m_transpositions(), 
+    LDLT()
+      : m_matrix(),
+        m_transpositions(),
         m_sign(internal::ZeroSign),
-        m_isInitialized(false) 
+        m_isInitialized(false)
     {}
 
     /** \brief Default Constructor with memory preallocation
@@ -85,7 +87,7 @@ template<typename _MatrixType, int _UpLo> class LDLT
       * according to the specified problem \a size.
       * \sa LDLT()
       */
-    LDLT(Index size)
+    explicit LDLT(Index size)
       : m_matrix(size, size),
         m_transpositions(size),
         m_temporary(size),
@@ -96,16 +98,35 @@ template<typename _MatrixType, int _UpLo> class LDLT
     /** \brief Constructor with decomposition
       *
       * This calculates the decomposition for the input \a matrix.
+      *
       * \sa LDLT(Index size)
       */
-    LDLT(const MatrixType& matrix)
+    template<typename InputType>
+    explicit LDLT(const EigenBase<InputType>& matrix)
       : m_matrix(matrix.rows(), matrix.cols()),
         m_transpositions(matrix.rows()),
         m_temporary(matrix.rows()),
         m_sign(internal::ZeroSign),
         m_isInitialized(false)
     {
-      compute(matrix);
+      compute(matrix.derived());
+    }
+
+    /** \brief Constructs a LDLT factorization from a given matrix
+      *
+      * This overloaded constructor is provided for \link InplaceDecomposition inplace decomposition \endlink when \c MatrixType is a Eigen::Ref.
+      *
+      * \sa LDLT(const EigenBase&)
+      */
+    template<typename InputType>
+    explicit LDLT(EigenBase<InputType>& matrix)
+      : m_matrix(matrix.derived()),
+        m_transpositions(matrix.rows()),
+        m_temporary(matrix.rows()),
+        m_sign(internal::ZeroSign),
+        m_isInitialized(false)
+    {
+      compute(matrix.derived());
     }
 
     /** Clear any existing decomposition
@@ -151,13 +172,6 @@ template<typename _MatrixType, int _UpLo> class LDLT
       eigen_assert(m_isInitialized && "LDLT is not initialized.");
       return m_sign == internal::PositiveSemiDef || m_sign == internal::ZeroSign;
     }
-    
-    #ifdef EIGEN2_SUPPORT
-    inline bool isPositiveDefinite() const
-    {
-      return isPositive();
-    }
-    #endif
 
     /** \returns true if the matrix is negative (semidefinite) */
     inline bool isNegative(void) const
@@ -173,37 +187,38 @@ template<typename _MatrixType, int _UpLo> class LDLT
       * \note_about_checking_solutions
       *
       * More precisely, this method solves \f$ A x = b \f$ using the decomposition \f$ A = P^T L D L^* P \f$
-      * by solving the systems \f$ P^T y_1 = b \f$, \f$ L y_2 = y_1 \f$, \f$ D y_3 = y_2 \f$, 
+      * by solving the systems \f$ P^T y_1 = b \f$, \f$ L y_2 = y_1 \f$, \f$ D y_3 = y_2 \f$,
       * \f$ L^* y_4 = y_3 \f$ and \f$ P x = y_4 \f$ in succession. If the matrix \f$ A \f$ is singular, then
       * \f$ D \f$ will also be singular (all the other matrices are invertible). In that case, the
       * least-square solution of \f$ D y_3 = y_2 \f$ is computed. This does not mean that this function
       * computes the least-square solution of \f$ A x = b \f$ is \f$ A \f$ is singular.
       *
-      * \sa MatrixBase::ldlt()
+      * \sa MatrixBase::ldlt(), SelfAdjointView::ldlt()
       */
     template<typename Rhs>
-    inline const internal::solve_retval<LDLT, Rhs>
+    inline const Solve<LDLT, Rhs>
     solve(const MatrixBase<Rhs>& b) const
     {
       eigen_assert(m_isInitialized && "LDLT is not initialized.");
       eigen_assert(m_matrix.rows()==b.rows()
                 && "LDLT::solve(): invalid number of rows of the right hand side matrix b");
-      return internal::solve_retval<LDLT, Rhs>(*this, b.derived());
+      return Solve<LDLT, Rhs>(*this, b.derived());
     }
 
-    #ifdef EIGEN2_SUPPORT
-    template<typename OtherDerived, typename ResultType>
-    bool solve(const MatrixBase<OtherDerived>& b, ResultType *result) const
-    {
-      *result = this->solve(b);
-      return true;
-    }
-    #endif
-
     template<typename Derived>
     bool solveInPlace(MatrixBase<Derived> &bAndX) const;
 
-    LDLT& compute(const MatrixType& matrix);
+    template<typename InputType>
+    LDLT& compute(const EigenBase<InputType>& matrix);
+
+    /** \returns an estimate of the reciprocal condition number of the matrix of
+     *  which \c *this is the LDLT decomposition.
+     */
+    RealScalar rcond() const
+    {
+      eigen_assert(m_isInitialized && "LDLT is not initialized.");
+      return internal::rcond_estimate_helper(m_l1_norm, *this);
+    }
 
     template <typename Derived>
     LDLT& rankUpdate(const MatrixBase<Derived>& w, const RealScalar& alpha=1);
@@ -220,22 +235,35 @@ template<typename _MatrixType, int _UpLo> class LDLT
 
     MatrixType reconstructedMatrix() const;
 
+    /** \returns the adjoint of \c *this, that is, a const reference to the decomposition itself as the underlying matrix is self-adjoint.
+      *
+      * This method is provided for compatibility with other matrix decompositions, thus enabling generic code such as:
+      * \code x = decomposition.adjoint().solve(b) \endcode
+      */
+    const LDLT& adjoint() const { return *this; };
+
     inline Index rows() const { return m_matrix.rows(); }
     inline Index cols() const { return m_matrix.cols(); }
 
     /** \brief Reports whether previous computation was successful.
       *
       * \returns \c Success if computation was succesful,
-      *          \c NumericalIssue if the matrix.appears to be negative.
+      *          \c NumericalIssue if the factorization failed because of a zero pivot.
       */
     ComputationInfo info() const
     {
       eigen_assert(m_isInitialized && "LDLT is not initialized.");
-      return Success;
+      return m_info;
     }
 
+    #ifndef EIGEN_PARSED_BY_DOXYGEN
+    template<typename RhsType, typename DstType>
+    EIGEN_DEVICE_FUNC
+    void _solve_impl(const RhsType &rhs, DstType &dst) const;
+    #endif
+
   protected:
-    
+
     static void check_template_parameters()
     {
       EIGEN_STATIC_ASSERT_NON_INTEGER(Scalar);
@@ -248,10 +276,12 @@ template<typename _MatrixType, int _UpLo> class LDLT
       * is not stored), and the diagonal entries correspond to D.
       */
     MatrixType m_matrix;
+    RealScalar m_l1_norm;
     TranspositionType m_transpositions;
     TmpMatrixType m_temporary;
     internal::SignMatrix m_sign;
     bool m_isInitialized;
+    ComputationInfo m_info;
 };
 
 namespace internal {
@@ -266,15 +296,18 @@ template<> struct ldlt_inplace<Lower>
     using std::abs;
     typedef typename MatrixType::Scalar Scalar;
     typedef typename MatrixType::RealScalar RealScalar;
-    typedef typename MatrixType::Index Index;
+    typedef typename TranspositionType::StorageIndex IndexType;
     eigen_assert(mat.rows()==mat.cols());
     const Index size = mat.rows();
+    bool found_zero_pivot = false;
+    bool ret = true;
 
     if (size <= 1)
     {
       transpositions.setIdentity();
-      if (numext::real(mat.coeff(0,0)) > 0) sign = PositiveSemiDef;
-      else if (numext::real(mat.coeff(0,0)) < 0) sign = NegativeSemiDef;
+      if(size==0) sign = ZeroSign;
+      else if (numext::real(mat.coeff(0,0)) > static_cast<RealScalar>(0) ) sign = PositiveSemiDef;
+      else if (numext::real(mat.coeff(0,0)) < static_cast<RealScalar>(0)) sign = NegativeSemiDef;
       else sign = ZeroSign;
       return true;
     }
@@ -286,7 +319,7 @@ template<> struct ldlt_inplace<Lower>
       mat.diagonal().tail(size-k).cwiseAbs().maxCoeff(&index_of_biggest_in_corner);
       index_of_biggest_in_corner += k;
 
-      transpositions.coeffRef(k) = index_of_biggest_in_corner;
+      transpositions.coeffRef(k) = IndexType(index_of_biggest_in_corner);
       if(k != index_of_biggest_in_corner)
       {
         // apply the transposition while taking care to consider only
@@ -295,7 +328,7 @@ template<> struct ldlt_inplace<Lower>
         mat.row(k).head(k).swap(mat.row(index_of_biggest_in_corner).head(k));
         mat.col(k).tail(s).swap(mat.col(index_of_biggest_in_corner).tail(s));
         std::swap(mat.coeffRef(k,k),mat.coeffRef(index_of_biggest_in_corner,index_of_biggest_in_corner));
-        for(int i=k+1;i<index_of_biggest_in_corner;++i)
+        for(Index i=k+1;i<index_of_biggest_in_corner;++i)
         {
           Scalar tmp = mat.coeffRef(i,k);
           mat.coeffRef(i,k) = numext::conj(mat.coeffRef(index_of_biggest_in_corner,i));
@@ -321,26 +354,46 @@ template<> struct ldlt_inplace<Lower>
         if(rs>0)
           A21.noalias() -= A20 * temp.head(k);
       }
-      
+
       // In some previous versions of Eigen (e.g., 3.2.1), the scaling was omitted if the pivot
-      // was smaller than the cutoff value. However, soince LDLT is not rank-revealing
-      // we should only make sure we do not introduce INF or NaN values.
-      // LAPACK also uses 0 as the cutoff value.
+      // was smaller than the cutoff value. However, since LDLT is not rank-revealing
+      // we should only make sure that we do not introduce INF or NaN values.
+      // Remark that LAPACK also uses 0 as the cutoff value.
       RealScalar realAkk = numext::real(mat.coeffRef(k,k));
-      if((rs>0) && (abs(realAkk) > RealScalar(0)))
+      bool pivot_is_valid = (abs(realAkk) > RealScalar(0));
+
+      if(k==0 && !pivot_is_valid)
+      {
+        // The entire diagonal is zero, there is nothing more to do
+        // except filling the transpositions, and checking whether the matrix is zero.
+        sign = ZeroSign;
+        for(Index j = 0; j<size; ++j)
+        {
+          transpositions.coeffRef(j) = IndexType(j);
+          ret = ret && (mat.col(j).tail(size-j-1).array()==Scalar(0)).all();
+        }
+        return ret;
+      }
+
+      if((rs>0) && pivot_is_valid)
         A21 /= realAkk;
+      else if(rs>0)
+        ret = ret && (A21.array()==Scalar(0)).all();
+
+      if(found_zero_pivot && pivot_is_valid) ret = false; // factorization failed
+      else if(!pivot_is_valid) found_zero_pivot = true;
 
       if (sign == PositiveSemiDef) {
-        if (realAkk < 0) sign = Indefinite;
+        if (realAkk < static_cast<RealScalar>(0)) sign = Indefinite;
       } else if (sign == NegativeSemiDef) {
-        if (realAkk > 0) sign = Indefinite;
+        if (realAkk > static_cast<RealScalar>(0)) sign = Indefinite;
       } else if (sign == ZeroSign) {
-        if (realAkk > 0) sign = PositiveSemiDef;
-        else if (realAkk < 0) sign = NegativeSemiDef;
+        if (realAkk > static_cast<RealScalar>(0)) sign = PositiveSemiDef;
+        else if (realAkk < static_cast<RealScalar>(0)) sign = NegativeSemiDef;
       }
     }
 
-    return true;
+    return ret;
   }
 
   // Reference for the algorithm: Davis and Hager, "Multiple Rank
@@ -356,7 +409,6 @@ template<> struct ldlt_inplace<Lower>
     using numext::isfinite;
     typedef typename MatrixType::Scalar Scalar;
     typedef typename MatrixType::RealScalar RealScalar;
-    typedef typename MatrixType::Index Index;
 
     const Index size = mat.rows();
     eigen_assert(mat.cols() == size && w.size()==size);
@@ -420,16 +472,16 @@ template<typename MatrixType> struct LDLT_Traits<MatrixType,Lower>
 {
   typedef const TriangularView<const MatrixType, UnitLower> MatrixL;
   typedef const TriangularView<const typename MatrixType::AdjointReturnType, UnitUpper> MatrixU;
-  static inline MatrixL getL(const MatrixType& m) { return m; }
-  static inline MatrixU getU(const MatrixType& m) { return m.adjoint(); }
+  static inline MatrixL getL(const MatrixType& m) { return MatrixL(m); }
+  static inline MatrixU getU(const MatrixType& m) { return MatrixU(m.adjoint()); }
 };
 
 template<typename MatrixType> struct LDLT_Traits<MatrixType,Upper>
 {
   typedef const TriangularView<const typename MatrixType::AdjointReturnType, UnitLower> MatrixL;
   typedef const TriangularView<const MatrixType, UnitUpper> MatrixU;
-  static inline MatrixL getL(const MatrixType& m) { return m.adjoint(); }
-  static inline MatrixU getU(const MatrixType& m) { return m; }
+  static inline MatrixL getL(const MatrixType& m) { return MatrixL(m.adjoint()); }
+  static inline MatrixU getU(const MatrixType& m) { return MatrixU(m); }
 };
 
 } // end namespace internal
@@ -437,21 +489,35 @@ template<typename MatrixType> struct LDLT_Traits<MatrixType,Upper>
 /** Compute / recompute the LDLT decomposition A = L D L^* = U^* D U of \a matrix
   */
 template<typename MatrixType, int _UpLo>
-LDLT<MatrixType,_UpLo>& LDLT<MatrixType,_UpLo>::compute(const MatrixType& a)
+template<typename InputType>
+LDLT<MatrixType,_UpLo>& LDLT<MatrixType,_UpLo>::compute(const EigenBase<InputType>& a)
 {
   check_template_parameters();
-  
+
   eigen_assert(a.rows()==a.cols());
   const Index size = a.rows();
 
-  m_matrix = a;
+  m_matrix = a.derived();
+
+  // Compute matrix L1 norm = max abs column sum.
+  m_l1_norm = RealScalar(0);
+  // TODO move this code to SelfAdjointView
+  for (Index col = 0; col < size; ++col) {
+    RealScalar abs_col_sum;
+    if (_UpLo == Lower)
+      abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>();
+    else
+      abs_col_sum = m_matrix.col(col).head(col).template lpNorm<1>() + m_matrix.row(col).tail(size - col).template lpNorm<1>();
+    if (abs_col_sum > m_l1_norm)
+      m_l1_norm = abs_col_sum;
+  }
 
   m_transpositions.resize(size);
   m_isInitialized = false;
   m_temporary.resize(size);
   m_sign = internal::ZeroSign;
 
-  internal::ldlt_inplace<UpLo>::unblocked(m_matrix, m_transpositions, m_temporary, m_sign);
+  m_info = internal::ldlt_inplace<UpLo>::unblocked(m_matrix, m_transpositions, m_temporary, m_sign) ? Success : NumericalIssue;
 
   m_isInitialized = true;
   return *this;
@@ -466,18 +532,19 @@ template<typename MatrixType, int _UpLo>
 template<typename Derived>
 LDLT<MatrixType,_UpLo>& LDLT<MatrixType,_UpLo>::rankUpdate(const MatrixBase<Derived>& w, const typename LDLT<MatrixType,_UpLo>::RealScalar& sigma)
 {
+  typedef typename TranspositionType::StorageIndex IndexType;
   const Index size = w.rows();
   if (m_isInitialized)
   {
     eigen_assert(m_matrix.rows()==size);
   }
   else
-  {    
+  {
     m_matrix.resize(size,size);
     m_matrix.setZero();
     m_transpositions.resize(size);
     for (Index i = 0; i < size; i++)
-      m_transpositions.coeffRef(i) = i;
+      m_transpositions.coeffRef(i) = IndexType(i);
     m_temporary.resize(size);
     m_sign = sigma>=0 ? internal::PositiveSemiDef : internal::NegativeSemiDef;
     m_isInitialized = true;
@@ -488,53 +555,46 @@ LDLT<MatrixType,_UpLo>& LDLT<MatrixType,_UpLo>::rankUpdate(const MatrixBase<Deri
   return *this;
 }
 
-namespace internal {
-template<typename _MatrixType, int _UpLo, typename Rhs>
-struct solve_retval<LDLT<_MatrixType,_UpLo>, Rhs>
-  : solve_retval_base<LDLT<_MatrixType,_UpLo>, Rhs>
+#ifndef EIGEN_PARSED_BY_DOXYGEN
+template<typename _MatrixType, int _UpLo>
+template<typename RhsType, typename DstType>
+void LDLT<_MatrixType,_UpLo>::_solve_impl(const RhsType &rhs, DstType &dst) const
 {
-  typedef LDLT<_MatrixType,_UpLo> LDLTType;
-  EIGEN_MAKE_SOLVE_HELPERS(LDLTType,Rhs)
+  eigen_assert(rhs.rows() == rows());
+  // dst = P b
+  dst = m_transpositions * rhs;
 
-  template<typename Dest> void evalTo(Dest& dst) const
+  // dst = L^-1 (P b)
+  matrixL().solveInPlace(dst);
+
+  // dst = D^-1 (L^-1 P b)
+  // more precisely, use pseudo-inverse of D (see bug 241)
+  using std::abs;
+  const typename Diagonal<const MatrixType>::RealReturnType vecD(vectorD());
+  // In some previous versions, tolerance was set to the max of 1/highest (or rather numeric_limits::min())
+  // and the maximal diagonal entry * epsilon as motivated by LAPACK's xGELSS:
+  // RealScalar tolerance = numext::maxi(vecD.array().abs().maxCoeff() * NumTraits<RealScalar>::epsilon(),RealScalar(1) / NumTraits<RealScalar>::highest());
+  // However, LDLT is not rank revealing, and so adjusting the tolerance wrt to the highest
+  // diagonal element is not well justified and leads to numerical issues in some cases.
+  // Moreover, Lapack's xSYTRS routines use 0 for the tolerance.
+  // Using numeric_limits::min() gives us more robustness to denormals.
+  RealScalar tolerance = (std::numeric_limits<RealScalar>::min)();
+
+  for (Index i = 0; i < vecD.size(); ++i)
   {
-    eigen_assert(rhs().rows() == dec().matrixLDLT().rows());
-    // dst = P b
-    dst = dec().transpositionsP() * rhs();
-
-    // dst = L^-1 (P b)
-    dec().matrixL().solveInPlace(dst);
-
-    // dst = D^-1 (L^-1 P b)
-    // more precisely, use pseudo-inverse of D (see bug 241)
-    using std::abs;
-    using std::max;
-    typedef typename LDLTType::MatrixType MatrixType;
-    typedef typename LDLTType::RealScalar RealScalar;
-    const typename Diagonal<const MatrixType>::RealReturnType vectorD(dec().vectorD());
-    // In some previous versions, tolerance was set to the max of 1/highest and the maximal diagonal entry * epsilon
-    // as motivated by LAPACK's xGELSS:
-    // RealScalar tolerance = (max)(vectorD.array().abs().maxCoeff() *NumTraits<RealScalar>::epsilon(),RealScalar(1) / NumTraits<RealScalar>::highest());
-    // However, LDLT is not rank revealing, and so adjusting the tolerance wrt to the highest
-    // diagonal element is not well justified and to numerical issues in some cases.
-    // Moreover, Lapack's xSYTRS routines use 0 for the tolerance.
-    RealScalar tolerance = RealScalar(1) / NumTraits<RealScalar>::highest();
-    
-    for (Index i = 0; i < vectorD.size(); ++i) {
-      if(abs(vectorD(i)) > tolerance)
-        dst.row(i) /= vectorD(i);
-      else
-        dst.row(i).setZero();
-    }
-
-    // dst = L^-T (D^-1 L^-1 P b)
-    dec().matrixU().solveInPlace(dst);
-
-    // dst = P^-1 (L^-T D^-1 L^-1 P b) = A^-1 b
-    dst = dec().transpositionsP().transpose() * dst;
+    if(abs(vecD(i)) > tolerance)
+      dst.row(i) /= vecD(i);
+    else
+      dst.row(i).setZero();
   }
-};
+
+  // dst = L^-T (D^-1 L^-1 P b)
+  matrixU().solveInPlace(dst);
+
+  // dst = P^-1 (L^-T D^-1 L^-1 P b) = A^-1 b
+  dst = m_transpositions.transpose() * dst;
 }
+#endif
 
 /** \internal use x = ldlt_object.solve(x);
   *
@@ -588,6 +648,7 @@ MatrixType LDLT<MatrixType,_UpLo>::reconstructedMatrix() const
 
 /** \cholesky_module
   * \returns the Cholesky decomposition with full pivoting without square root of \c *this
+  * \sa MatrixBase::ldlt()
   */
 template<typename MatrixType, unsigned int UpLo>
 inline const LDLT<typename SelfAdjointView<MatrixType, UpLo>::PlainObject, UpLo>
@@ -598,6 +659,7 @@ SelfAdjointView<MatrixType, UpLo>::ldlt() const
 
 /** \cholesky_module
   * \returns the Cholesky decomposition with full pivoting without square root of \c *this
+  * \sa SelfAdjointView::ldlt()
   */
 template<typename Derived>
 inline const LDLT<typename MatrixBase<Derived>::PlainObject>

extern/Eigen3/Eigen/src/Cholesky/LLT.h

@@ -10,7 +10,7 @@
 #ifndef EIGEN_LLT_H
 #define EIGEN_LLT_H
 
-namespace Eigen { 
+namespace Eigen {
 
 namespace internal{
 template<typename MatrixType, int UpLo> struct LLT_Traits;
@@ -22,9 +22,9 @@ template<typename MatrixType, int UpLo> struct LLT_Traits;
   *
   * \brief Standard Cholesky decomposition (LL^T) of a matrix and associated features
   *
-  * \param MatrixType the type of the matrix of which we are computing the LL^T Cholesky decomposition
-  * \param UpLo the triangular part that will be used for the decompositon: Lower (default) or Upper.
-  *             The other triangular part won't be read.
+  * \tparam _MatrixType the type of the matrix of which we are computing the LL^T Cholesky decomposition
+  * \tparam _UpLo the triangular part that will be used for the decompositon: Lower (default) or Upper.
+  *               The other triangular part won't be read.
   *
   * This class performs a LL^T Cholesky decomposition of a symmetric, positive definite
   * matrix A such that A = LL^* = U^*U, where L is lower triangular.
@@ -40,12 +40,18 @@ template<typename MatrixType, int UpLo> struct LLT_Traits;
   *
   * Example: \include LLT_example.cpp
   * Output: \verbinclude LLT_example.out
-  *    
-  * \sa MatrixBase::llt(), class LDLT
-  */
- /* HEY THIS DOX IS DISABLED BECAUSE THERE's A BUG EITHER HERE OR IN LDLT ABOUT THAT (OR BOTH)
-  * Note that during the decomposition, only the upper triangular part of A is considered. Therefore,
-  * the strict lower part does not have to store correct values.
+  *
+  * \b Performance: for best performance, it is recommended to use a column-major storage format
+  * with the Lower triangular part (the default), or, equivalently, a row-major storage format
+  * with the Upper triangular part. Otherwise, you might get a 20% slowdown for the full factorization
+  * step, and rank-updates can be up to 3 times slower.
+  *
+  * This class supports the \link InplaceDecomposition inplace decomposition \endlink mechanism.
+  *
+  * Note that during the decomposition, only the lower (or upper, as defined by _UpLo) triangular part of A is considered.
+  * Therefore, the strict lower part does not have to store correct values.
+  *
+  * \sa MatrixBase::llt(), SelfAdjointView::llt(), class LDLT
   */
 template<typename _MatrixType, int _UpLo> class LLT
 {
@@ -54,12 +60,12 @@ template<typename _MatrixType, int _UpLo> class LLT
     enum {
       RowsAtCompileTime = MatrixType::RowsAtCompileTime,
       ColsAtCompileTime = MatrixType::ColsAtCompileTime,
-      Options = MatrixType::Options,
       MaxColsAtCompileTime = MatrixType::MaxColsAtCompileTime
     };
     typedef typename MatrixType::Scalar Scalar;
     typedef typename NumTraits<typename MatrixType::Scalar>::Real RealScalar;
-    typedef typename MatrixType::Index Index;
+    typedef Eigen::Index Index; ///< \deprecated since Eigen 3.3
+    typedef typename MatrixType::StorageIndex StorageIndex;
 
     enum {
       PacketSize = internal::packet_traits<Scalar>::size,
@@ -83,14 +89,30 @@ template<typename _MatrixType, int _UpLo> class LLT
       * according to the specified problem \a size.
       * \sa LLT()
       */
-    LLT(Index size) : m_matrix(size, size),
+    explicit LLT(Index size) : m_matrix(size, size),
                     m_isInitialized(false) {}
 
-    LLT(const MatrixType& matrix)
+    template<typename InputType>
+    explicit LLT(const EigenBase<InputType>& matrix)
       : m_matrix(matrix.rows(), matrix.cols()),
         m_isInitialized(false)
     {
-      compute(matrix);
+      compute(matrix.derived());
+    }
+
+    /** \brief Constructs a LDLT factorization from a given matrix
+      *
+      * This overloaded constructor is provided for \link InplaceDecomposition inplace decomposition \endlink when
+      * \c MatrixType is a Eigen::Ref.
+      *
+      * \sa LLT(const EigenBase&)
+      */
+    template<typename InputType>
+    explicit LLT(EigenBase<InputType>& matrix)
+      : m_matrix(matrix.derived()),
+        m_isInitialized(false)
+    {
+      compute(matrix.derived());
     }
 
     /** \returns a view of the upper triangular matrix U */
@@ -115,33 +137,33 @@ template<typename _MatrixType, int _UpLo> class LLT
       * Example: \include LLT_solve.cpp
       * Output: \verbinclude LLT_solve.out
       *
-      * \sa solveInPlace(), MatrixBase::llt()
+      * \sa solveInPlace(), MatrixBase::llt(), SelfAdjointView::llt()
       */
     template<typename Rhs>
-    inline const internal::solve_retval<LLT, Rhs>
+    inline const Solve<LLT, Rhs>
     solve(const MatrixBase<Rhs>& b) const
     {
       eigen_assert(m_isInitialized && "LLT is not initialized.");
       eigen_assert(m_matrix.rows()==b.rows()
                 && "LLT::solve(): invalid number of rows of the right hand side matrix b");
-      return internal::solve_retval<LLT, Rhs>(*this, b.derived());
+      return Solve<LLT, Rhs>(*this, b.derived());
     }
 
-    #ifdef EIGEN2_SUPPORT
-    template<typename OtherDerived, typename ResultType>
-    bool solve(const MatrixBase<OtherDerived>& b, ResultType *result) const
-    {
-      *result = this->solve(b);
-      return true;
-    }
-    
-    bool isPositiveDefinite() const { return true; }
-    #endif
-
     template<typename Derived>
-    void solveInPlace(MatrixBase<Derived> &bAndX) const;
+    void solveInPlace(const MatrixBase<Derived> &bAndX) const;
 
-    LLT& compute(const MatrixType& matrix);
+    template<typename InputType>
+    LLT& compute(const EigenBase<InputType>& matrix);
+
+    /** \returns an estimate of the reciprocal condition number of the matrix of
+      *  which \c *this is the Cholesky decomposition.
+      */
+    RealScalar rcond() const
+    {
+      eigen_assert(m_isInitialized && "LLT is not initialized.");
+      eigen_assert(m_info == Success && "LLT failed because matrix appears to be negative");
+      return internal::rcond_estimate_helper(m_l1_norm, *this);
+    }
 
     /** \returns the LLT decomposition matrix
       *
@@ -159,7 +181,7 @@ template<typename _MatrixType, int _UpLo> class LLT
     /** \brief Reports whether previous computation was successful.
       *
       * \returns \c Success if computation was succesful,
-      *          \c NumericalIssue if the matrix.appears to be negative.
+      *          \c NumericalIssue if the matrix.appears not to be positive definite.
       */
     ComputationInfo info() const
     {
@@ -167,24 +189,38 @@ template<typename _MatrixType, int _UpLo> class LLT
       return m_info;
     }
 
+    /** \returns the adjoint of \c *this, that is, a const reference to the decomposition itself as the underlying matrix is self-adjoint.
+      *
+      * This method is provided for compatibility with other matrix decompositions, thus enabling generic code such as:
+      * \code x = decomposition.adjoint().solve(b) \endcode
+      */
+    const LLT& adjoint() const { return *this; };
+
     inline Index rows() const { return m_matrix.rows(); }
     inline Index cols() const { return m_matrix.cols(); }
 
     template<typename VectorType>
     LLT rankUpdate(const VectorType& vec, const RealScalar& sigma = 1);
 
+    #ifndef EIGEN_PARSED_BY_DOXYGEN
+    template<typename RhsType, typename DstType>
+    EIGEN_DEVICE_FUNC
+    void _solve_impl(const RhsType &rhs, DstType &dst) const;
+    #endif
+
   protected:
-    
+
     static void check_template_parameters()
     {
       EIGEN_STATIC_ASSERT_NON_INTEGER(Scalar);
     }
-    
+
     /** \internal
       * Used to compute and store L
       * The strict upper part is not used and even not initialized.
       */
     MatrixType m_matrix;
+    RealScalar m_l1_norm;
     bool m_isInitialized;
     ComputationInfo m_info;
 };
@@ -194,12 +230,11 @@ namespace internal {
 template<typename Scalar, int UpLo> struct llt_inplace;
 
 template<typename MatrixType, typename VectorType>
-static typename MatrixType::Index llt_rank_update_lower(MatrixType& mat, const VectorType& vec, const typename MatrixType::RealScalar& sigma)
+static Index llt_rank_update_lower(MatrixType& mat, const VectorType& vec, const typename MatrixType::RealScalar& sigma)
 {
   using std::sqrt;
   typedef typename MatrixType::Scalar Scalar;
   typedef typename MatrixType::RealScalar RealScalar;
-  typedef typename MatrixType::Index Index;
   typedef typename MatrixType::ColXpr ColXpr;
   typedef typename internal::remove_all<ColXpr>::type ColXprCleaned;
   typedef typename ColXprCleaned::SegmentReturnType ColXprSegment;
@@ -268,11 +303,10 @@ template<typename Scalar> struct llt_inplace<Scalar, Lower>
 {
   typedef typename NumTraits<Scalar>::Real RealScalar;
   template<typename MatrixType>
-  static typename MatrixType::Index unblocked(MatrixType& mat)
+  static Index unblocked(MatrixType& mat)
   {
     using std::sqrt;
-    typedef typename MatrixType::Index Index;
-    
+
     eigen_assert(mat.rows()==mat.cols());
     const Index size = mat.rows();
     for(Index k = 0; k < size; ++k)
@@ -295,9 +329,8 @@ template<typename Scalar> struct llt_inplace<Scalar, Lower>
   }
 
   template<typename MatrixType>
-  static typename MatrixType::Index blocked(MatrixType& m)
+  static Index blocked(MatrixType& m)
   {
-    typedef typename MatrixType::Index Index;
     eigen_assert(m.rows()==m.cols());
     Index size = m.rows();
     if(size<32)
@@ -322,36 +355,36 @@ template<typename Scalar> struct llt_inplace<Scalar, Lower>
       Index ret;
       if((ret=unblocked(A11))>=0) return k+ret;
       if(rs>0) A11.adjoint().template triangularView<Upper>().template solveInPlace<OnTheRight>(A21);
-      if(rs>0) A22.template selfadjointView<Lower>().rankUpdate(A21,-1); // bottleneck
+      if(rs>0) A22.template selfadjointView<Lower>().rankUpdate(A21,typename NumTraits<RealScalar>::Literal(-1)); // bottleneck
     }
     return -1;
   }
 
   template<typename MatrixType, typename VectorType>
-  static typename MatrixType::Index rankUpdate(MatrixType& mat, const VectorType& vec, const RealScalar& sigma)
+  static Index rankUpdate(MatrixType& mat, const VectorType& vec, const RealScalar& sigma)
   {
     return Eigen::internal::llt_rank_update_lower(mat, vec, sigma);
   }
 };
-  
+
 template<typename Scalar> struct llt_inplace<Scalar, Upper>
 {
   typedef typename NumTraits<Scalar>::Real RealScalar;
 
   template<typename MatrixType>
-  static EIGEN_STRONG_INLINE typename MatrixType::Index unblocked(MatrixType& mat)
+  static EIGEN_STRONG_INLINE Index unblocked(MatrixType& mat)
   {
     Transpose<MatrixType> matt(mat);
     return llt_inplace<Scalar, Lower>::unblocked(matt);
   }
   template<typename MatrixType>
-  static EIGEN_STRONG_INLINE typename MatrixType::Index blocked(MatrixType& mat)
+  static EIGEN_STRONG_INLINE Index blocked(MatrixType& mat)
   {
     Transpose<MatrixType> matt(mat);
     return llt_inplace<Scalar, Lower>::blocked(matt);
   }
   template<typename MatrixType, typename VectorType>
-  static typename MatrixType::Index rankUpdate(MatrixType& mat, const VectorType& vec, const RealScalar& sigma)
+  static Index rankUpdate(MatrixType& mat, const VectorType& vec, const RealScalar& sigma)
   {
     Transpose<MatrixType> matt(mat);
     return llt_inplace<Scalar, Lower>::rankUpdate(matt, vec.conjugate(), sigma);
@@ -362,8 +395,8 @@ template<typename MatrixType> struct LLT_Traits<MatrixType,Lower>
 {
   typedef const TriangularView<const MatrixType, Lower> MatrixL;
   typedef const TriangularView<const typename MatrixType::AdjointReturnType, Upper> MatrixU;
-  static inline MatrixL getL(const MatrixType& m) { return m; }
-  static inline MatrixU getU(const MatrixType& m) { return m.adjoint(); }
+  static inline MatrixL getL(const MatrixType& m) { return MatrixL(m); }
+  static inline MatrixU getU(const MatrixType& m) { return MatrixU(m.adjoint()); }
   static bool inplace_decomposition(MatrixType& m)
   { return llt_inplace<typename MatrixType::Scalar, Lower>::blocked(m)==-1; }
 };
@@ -372,8 +405,8 @@ template<typename MatrixType> struct LLT_Traits<MatrixType,Upper>
 {
   typedef const TriangularView<const typename MatrixType::AdjointReturnType, Lower> MatrixL;
   typedef const TriangularView<const MatrixType, Upper> MatrixU;
-  static inline MatrixL getL(const MatrixType& m) { return m.adjoint(); }
-  static inline MatrixU getU(const MatrixType& m) { return m; }
+  static inline MatrixL getL(const MatrixType& m) { return MatrixL(m.adjoint()); }
+  static inline MatrixU getU(const MatrixType& m) { return MatrixU(m); }
   static bool inplace_decomposition(MatrixType& m)
   { return llt_inplace<typename MatrixType::Scalar, Upper>::blocked(m)==-1; }
 };
@@ -388,14 +421,29 @@ template<typename MatrixType> struct LLT_Traits<MatrixType,Upper>
   * Output: \verbinclude TutorialLinAlgComputeTwice.out
   */
 template<typename MatrixType, int _UpLo>
-LLT<MatrixType,_UpLo>& LLT<MatrixType,_UpLo>::compute(const MatrixType& a)
+template<typename InputType>
+LLT<MatrixType,_UpLo>& LLT<MatrixType,_UpLo>::compute(const EigenBase<InputType>& a)
 {
   check_template_parameters();
-  
+
   eigen_assert(a.rows()==a.cols());
   const Index size = a.rows();
   m_matrix.resize(size, size);
-  m_matrix = a;
+  if (!internal::is_same_dense(m_matrix, a.derived()))
+    m_matrix = a.derived();
+
+  // Compute matrix L1 norm = max abs column sum.
+  m_l1_norm = RealScalar(0);
+  // TODO move this code to SelfAdjointView
+  for (Index col = 0; col < size; ++col) {
+    RealScalar abs_col_sum;
+    if (_UpLo == Lower)
+      abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>();
+    else
+      abs_col_sum = m_matrix.col(col).head(col).template lpNorm<1>() + m_matrix.row(col).tail(size - col).template lpNorm<1>();
+    if (abs_col_sum > m_l1_norm)
+      m_l1_norm = abs_col_sum;
+  }
 
   m_isInitialized = true;
   bool ok = Traits::inplace_decomposition(m_matrix);
@@ -423,39 +471,33 @@ LLT<_MatrixType,_UpLo> LLT<_MatrixType,_UpLo>::rankUpdate(const VectorType& v, c
 
   return *this;
 }
-    
-namespace internal {
-template<typename _MatrixType, int UpLo, typename Rhs>
-struct solve_retval<LLT<_MatrixType, UpLo>, Rhs>
-  : solve_retval_base<LLT<_MatrixType, UpLo>, Rhs>
-{
-  typedef LLT<_MatrixType,UpLo> LLTType;
-  EIGEN_MAKE_SOLVE_HELPERS(LLTType,Rhs)
 
-  template<typename Dest> void evalTo(Dest& dst) const
-  {
-    dst = rhs();
-    dec().solveInPlace(dst);
-  }
-};
+#ifndef EIGEN_PARSED_BY_DOXYGEN
+template<typename _MatrixType,int _UpLo>
+template<typename RhsType, typename DstType>
+void LLT<_MatrixType,_UpLo>::_solve_impl(const RhsType &rhs, DstType &dst) const
+{
+  dst = rhs;
+  solveInPlace(dst);
 }
+#endif
 
 /** \internal use x = llt_object.solve(x);
-  * 
+  *
   * This is the \em in-place version of solve().
   *
   * \param bAndX represents both the right-hand side matrix b and result x.
   *
-  * \returns true always! If you need to check for existence of solutions, use another decomposition like LU, QR, or SVD.
+  * This version avoids a copy when the right hand side matrix b is not needed anymore.
   *
-  * This version avoids a copy when the right hand side matrix b is not
-  * needed anymore.
+  * \warning The parameter is only marked 'const' to make the C++ compiler accept a temporary expression here.
+  * This function will const_cast it, so constness isn't honored here.
   *
   * \sa LLT::solve(), MatrixBase::llt()
   */
 template<typename MatrixType, int _UpLo>
 template<typename Derived>
-void LLT<MatrixType,_UpLo>::solveInPlace(MatrixBase<Derived> &bAndX) const
+void LLT<MatrixType,_UpLo>::solveInPlace(const MatrixBase<Derived> &bAndX) const
 {
   eigen_assert(m_isInitialized && "LLT is not initialized.");
   eigen_assert(m_matrix.rows()==bAndX.rows());
@@ -475,6 +517,7 @@ MatrixType LLT<MatrixType,_UpLo>::reconstructedMatrix() const
 
 /** \cholesky_module
   * \returns the LLT decomposition of \c *this
+  * \sa SelfAdjointView::llt()
   */
 template<typename Derived>
 inline const LLT<typename MatrixBase<Derived>::PlainObject>
@@ -485,6 +528,7 @@ MatrixBase<Derived>::llt() const
 
 /** \cholesky_module
   * \returns the LLT decomposition of \c *this
+  * \sa SelfAdjointView::llt()
   */
 template<typename MatrixType, unsigned int UpLo>
 inline const LLT<typename SelfAdjointView<MatrixType, UpLo>::PlainObject, UpLo>

extern/Eigen3/Eigen/src/Cholesky/LLT_LAPACKE.h

@@ -0,0 +1,99 @@
+/*
+ Copyright (c) 2011, Intel Corporation. All rights reserved.
+
+ Redistribution and use in source and binary forms, with or without modification,
+ are permitted provided that the following conditions are met:
+
+ * Redistributions of source code must retain the above copyright notice, this
+   list of conditions and the following disclaimer.
+ * Redistributions in binary form must reproduce the above copyright notice,
+   this list of conditions and the following disclaimer in the documentation
+   and/or other materials provided with the distribution.
+ * Neither the name of Intel Corporation nor the names of its contributors may
+   be used to endorse or promote products derived from this software without
+   specific prior written permission.
+
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
+ ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
+ WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+ DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR
+ ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
+ (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
+ LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
+ ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
+ (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
+ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+ ********************************************************************************
+ *   Content : Eigen bindings to LAPACKe
+ *     LLt decomposition based on LAPACKE_?potrf function.
+ ********************************************************************************
+*/
+
+#ifndef EIGEN_LLT_LAPACKE_H
+#define EIGEN_LLT_LAPACKE_H
+
+namespace Eigen { 
+
+namespace internal {
+
+template<typename Scalar> struct lapacke_llt;
+
+#define EIGEN_LAPACKE_LLT(EIGTYPE, BLASTYPE, LAPACKE_PREFIX) \
+template<> struct lapacke_llt<EIGTYPE> \
+{ \
+  template<typename MatrixType> \
+  static inline Index potrf(MatrixType& m, char uplo) \
+  { \
+    lapack_int matrix_order; \
+    lapack_int size, lda, info, StorageOrder; \
+    EIGTYPE* a; \
+    eigen_assert(m.rows()==m.cols()); \
+    /* Set up parameters for ?potrf */ \
+    size = convert_index<lapack_int>(m.rows()); \
+    StorageOrder = MatrixType::Flags&RowMajorBit?RowMajor:ColMajor; \
+    matrix_order = StorageOrder==RowMajor ? LAPACK_ROW_MAJOR : LAPACK_COL_MAJOR; \
+    a = &(m.coeffRef(0,0)); \
+    lda = convert_index<lapack_int>(m.outerStride()); \
+\
+    info = LAPACKE_##LAPACKE_PREFIX##potrf( matrix_order, uplo, size, (BLASTYPE*)a, lda ); \
+    info = (info==0) ? -1 : info>0 ? info-1 : size; \
+    return info; \
+  } \
+}; \
+template<> struct llt_inplace<EIGTYPE, Lower> \
+{ \
+  template<typename MatrixType> \
+  static Index blocked(MatrixType& m) \
+  { \
+    return lapacke_llt<EIGTYPE>::potrf(m, 'L'); \
+  } \
+  template<typename MatrixType, typename VectorType> \
+  static Index rankUpdate(MatrixType& mat, const VectorType& vec, const typename MatrixType::RealScalar& sigma) \
+  { return Eigen::internal::llt_rank_update_lower(mat, vec, sigma); } \
+}; \
+template<> struct llt_inplace<EIGTYPE, Upper> \
+{ \
+  template<typename MatrixType> \
+  static Index blocked(MatrixType& m) \
+  { \
+    return lapacke_llt<EIGTYPE>::potrf(m, 'U'); \
+  } \
+  template<typename MatrixType, typename VectorType> \
+  static Index rankUpdate(MatrixType& mat, const VectorType& vec, const typename MatrixType::RealScalar& sigma) \
+  { \
+    Transpose<MatrixType> matt(mat); \
+    return llt_inplace<EIGTYPE, Lower>::rankUpdate(matt, vec.conjugate(), sigma); \
+  } \
+};
+
+EIGEN_LAPACKE_LLT(double, double, d)
+EIGEN_LAPACKE_LLT(float, float, s)
+EIGEN_LAPACKE_LLT(dcomplex, lapack_complex_double, z)
+EIGEN_LAPACKE_LLT(scomplex, lapack_complex_float, c)
+
+} // end namespace internal
+
+} // end namespace Eigen
+
+#endif // EIGEN_LLT_LAPACKE_H

extern/Eigen3/Eigen/src/CholmodSupport/CholmodSupport.h

@@ -14,46 +14,52 @@ namespace Eigen {
 
 namespace internal {
 
-template<typename Scalar, typename CholmodType>
-void cholmod_configure_matrix(CholmodType& mat)
-{
-  if (internal::is_same<Scalar,float>::value)
-  {
-    mat.xtype = CHOLMOD_REAL;
-    mat.dtype = CHOLMOD_SINGLE;
-  }
-  else if (internal::is_same<Scalar,double>::value)
-  {
+template<typename Scalar> struct cholmod_configure_matrix;
+
+template<> struct cholmod_configure_matrix<double> {
+  template<typename CholmodType>
+  static void run(CholmodType& mat) {
     mat.xtype = CHOLMOD_REAL;
     mat.dtype = CHOLMOD_DOUBLE;
   }
-  else if (internal::is_same<Scalar,std::complex<float> >::value)
-  {
-    mat.xtype = CHOLMOD_COMPLEX;
-    mat.dtype = CHOLMOD_SINGLE;
-  }
-  else if (internal::is_same<Scalar,std::complex<double> >::value)
-  {
+};
+
+template<> struct cholmod_configure_matrix<std::complex<double> > {
+  template<typename CholmodType>
+  static void run(CholmodType& mat) {
     mat.xtype = CHOLMOD_COMPLEX;
     mat.dtype = CHOLMOD_DOUBLE;
   }
-  else
-  {
-    eigen_assert(false && "Scalar type not supported by CHOLMOD");
-  }
-}
+};
+
+// Other scalar types are not yet suppotred by Cholmod
+// template<> struct cholmod_configure_matrix<float> {
+//   template<typename CholmodType>
+//   static void run(CholmodType& mat) {
+//     mat.xtype = CHOLMOD_REAL;
+//     mat.dtype = CHOLMOD_SINGLE;
+//   }
+// };
+//
+// template<> struct cholmod_configure_matrix<std::complex<float> > {
+//   template<typename CholmodType>
+//   static void run(CholmodType& mat) {
+//     mat.xtype = CHOLMOD_COMPLEX;
+//     mat.dtype = CHOLMOD_SINGLE;
+//   }
+// };
 
 } // namespace internal
 
 /** Wraps the Eigen sparse matrix \a mat into a Cholmod sparse matrix object.
   * Note that the data are shared.
   */
-template<typename _Scalar, int _Options, typename _Index>
-cholmod_sparse viewAsCholmod(SparseMatrix<_Scalar,_Options,_Index>& mat)
+template<typename _Scalar, int _Options, typename _StorageIndex>
+cholmod_sparse viewAsCholmod(Ref<SparseMatrix<_Scalar,_Options,_StorageIndex> > mat)
 {
   cholmod_sparse res;
   res.nzmax   = mat.nonZeros();
-  res.nrow    = mat.rows();;
+  res.nrow    = mat.rows();
   res.ncol    = mat.cols();
   res.p       = mat.outerIndexPtr();
   res.i       = mat.innerIndexPtr();
@@ -74,11 +80,11 @@ cholmod_sparse viewAsCholmod(SparseMatrix<_Scalar,_Options,_Index>& mat)
   res.dtype   = 0;
   res.stype   = -1;
   
-  if (internal::is_same<_Index,int>::value)
+  if (internal::is_same<_StorageIndex,int>::value)
   {
     res.itype = CHOLMOD_INT;
   }
-  else if (internal::is_same<_Index,SuiteSparse_long>::value)
+  else if (internal::is_same<_StorageIndex,long>::value)
   {
     res.itype = CHOLMOD_LONG;
   }
@@ -88,7 +94,7 @@ cholmod_sparse viewAsCholmod(SparseMatrix<_Scalar,_Options,_Index>& mat)
   }
 
   // setup res.xtype
-  internal::cholmod_configure_matrix<_Scalar>(res);
+  internal::cholmod_configure_matrix<_Scalar>::run(res);
   
   res.stype = 0;
   
@@ -98,16 +104,23 @@ cholmod_sparse viewAsCholmod(SparseMatrix<_Scalar,_Options,_Index>& mat)
 template<typename _Scalar, int _Options, typename _Index>
 const cholmod_sparse viewAsCholmod(const SparseMatrix<_Scalar,_Options,_Index>& mat)
 {
-  cholmod_sparse res = viewAsCholmod(mat.const_cast_derived());
+  cholmod_sparse res = viewAsCholmod(Ref<SparseMatrix<_Scalar,_Options,_Index> >(mat.const_cast_derived()));
+  return res;
+}
+
+template<typename _Scalar, int _Options, typename _Index>
+const cholmod_sparse viewAsCholmod(const SparseVector<_Scalar,_Options,_Index>& mat)
+{
+  cholmod_sparse res = viewAsCholmod(Ref<SparseMatrix<_Scalar,_Options,_Index> >(mat.const_cast_derived()));
   return res;
 }
 
 /** Returns a view of the Eigen sparse matrix \a mat as Cholmod sparse matrix.
   * The data are not copied but shared. */
 template<typename _Scalar, int _Options, typename _Index, unsigned int UpLo>
-cholmod_sparse viewAsCholmod(const SparseSelfAdjointView<SparseMatrix<_Scalar,_Options,_Index>, UpLo>& mat)
+cholmod_sparse viewAsCholmod(const SparseSelfAdjointView<const SparseMatrix<_Scalar,_Options,_Index>, UpLo>& mat)
 {
-  cholmod_sparse res = viewAsCholmod(mat.matrix().const_cast_derived());
+  cholmod_sparse res = viewAsCholmod(Ref<SparseMatrix<_Scalar,_Options,_Index> >(mat.matrix().const_cast_derived()));
   
   if(UpLo==Upper) res.stype =  1;
   if(UpLo==Lower) res.stype = -1;
@@ -131,19 +144,19 @@ cholmod_dense viewAsCholmod(MatrixBase<Derived>& mat)
   res.x      = (void*)(mat.derived().data());
   res.z      = 0;
 
-  internal::cholmod_configure_matrix<Scalar>(res);
+  internal::cholmod_configure_matrix<Scalar>::run(res);
 
   return res;
 }
 
 /** Returns a view of the Cholmod sparse matrix \a cm as an Eigen sparse matrix.
   * The data are not copied but shared. */
-template<typename Scalar, int Flags, typename Index>
-MappedSparseMatrix<Scalar,Flags,Index> viewAsEigen(cholmod_sparse& cm)
+template<typename Scalar, int Flags, typename StorageIndex>
+MappedSparseMatrix<Scalar,Flags,StorageIndex> viewAsEigen(cholmod_sparse& cm)
 {
-  return MappedSparseMatrix<Scalar,Flags,Index>
-         (cm.nrow, cm.ncol, static_cast<Index*>(cm.p)[cm.ncol],
-          static_cast<Index*>(cm.p), static_cast<Index*>(cm.i),static_cast<Scalar*>(cm.x) );
+  return MappedSparseMatrix<Scalar,Flags,StorageIndex>
+         (cm.nrow, cm.ncol, static_cast<StorageIndex*>(cm.p)[cm.ncol],
+          static_cast<StorageIndex*>(cm.p), static_cast<StorageIndex*>(cm.i),static_cast<Scalar*>(cm.x) );
 }
 
 enum CholmodMode {
@@ -157,29 +170,39 @@ enum CholmodMode {
   * \sa class CholmodSupernodalLLT, class CholmodSimplicialLDLT, class CholmodSimplicialLLT
   */
 template<typename _MatrixType, int _UpLo, typename Derived>
-class CholmodBase : internal::noncopyable
+class CholmodBase : public SparseSolverBase<Derived>
 {
+  protected:
+    typedef SparseSolverBase<Derived> Base;
+    using Base::derived;
+    using Base::m_isInitialized;
   public:
     typedef _MatrixType MatrixType;
     enum { UpLo = _UpLo };
     typedef typename MatrixType::Scalar Scalar;
     typedef typename MatrixType::RealScalar RealScalar;
     typedef MatrixType CholMatrixType;
-    typedef typename MatrixType::Index Index;
+    typedef typename MatrixType::StorageIndex StorageIndex;
+    enum {
+      ColsAtCompileTime = MatrixType::ColsAtCompileTime,
+      MaxColsAtCompileTime = MatrixType::MaxColsAtCompileTime
+    };
 
   public:
 
     CholmodBase()
-      : m_cholmodFactor(0), m_info(Success), m_isInitialized(false)
+      : m_cholmodFactor(0), m_info(Success), m_factorizationIsOk(false), m_analysisIsOk(false)
     {
-      m_shiftOffset[0] = m_shiftOffset[1] = RealScalar(0.0);
+      EIGEN_STATIC_ASSERT((internal::is_same<double,RealScalar>::value), CHOLMOD_SUPPORTS_DOUBLE_PRECISION_ONLY);
+      m_shiftOffset[0] = m_shiftOffset[1] = 0.0;
       cholmod_start(&m_cholmod);
     }
 
-    CholmodBase(const MatrixType& matrix)
-      : m_cholmodFactor(0), m_info(Success), m_isInitialized(false)
+    explicit CholmodBase(const MatrixType& matrix)
+      : m_cholmodFactor(0), m_info(Success), m_factorizationIsOk(false), m_analysisIsOk(false)
     {
-      m_shiftOffset[0] = m_shiftOffset[1] = RealScalar(0.0);
+      EIGEN_STATIC_ASSERT((internal::is_same<double,RealScalar>::value), CHOLMOD_SUPPORTS_DOUBLE_PRECISION_ONLY);
+      m_shiftOffset[0] = m_shiftOffset[1] = 0.0;
       cholmod_start(&m_cholmod);
       compute(matrix);
     }
@@ -191,11 +214,8 @@ class CholmodBase : internal::noncopyable
       cholmod_finish(&m_cholmod);
     }
     
-    inline Index cols() const { return m_cholmodFactor->n; }
-    inline Index rows() const { return m_cholmodFactor->n; }
-    
-    Derived& derived() { return *static_cast<Derived*>(this); }
-    const Derived& derived() const { return *static_cast<const Derived*>(this); }
+    inline StorageIndex cols() const { return internal::convert_index<StorageIndex, Index>(m_cholmodFactor->n); }
+    inline StorageIndex rows() const { return internal::convert_index<StorageIndex, Index>(m_cholmodFactor->n); }
     
     /** \brief Reports whether previous computation was successful.
       *
@@ -216,34 +236,6 @@ class CholmodBase : internal::noncopyable
       return derived();
     }
     
-    /** \returns the solution x of \f$ A x = b \f$ using the current decomposition of A.
-      *
-      * \sa compute()
-      */
-    template<typename Rhs>
-    inline const internal::solve_retval<CholmodBase, Rhs>
-    solve(const MatrixBase<Rhs>& b) const
-    {
-      eigen_assert(m_isInitialized && "LLT is not initialized.");
-      eigen_assert(rows()==b.rows()
-                && "CholmodDecomposition::solve(): invalid number of rows of the right hand side matrix b");
-      return internal::solve_retval<CholmodBase, Rhs>(*this, b.derived());
-    }
-    
-    /** \returns the solution x of \f$ A x = b \f$ using the current decomposition of A.
-      *
-      * \sa compute()
-      */
-    template<typename Rhs>
-    inline const internal::sparse_solve_retval<CholmodBase, Rhs>
-    solve(const SparseMatrixBase<Rhs>& b) const
-    {
-      eigen_assert(m_isInitialized && "LLT is not initialized.");
-      eigen_assert(rows()==b.rows()
-                && "CholmodDecomposition::solve(): invalid number of rows of the right hand side matrix b");
-      return internal::sparse_solve_retval<CholmodBase, Rhs>(*this, b.derived());
-    }
-    
     /** Performs a symbolic decomposition on the sparsity pattern of \a matrix.
       *
       * This function is particularly useful when solving for several problems having the same structure.
@@ -277,7 +269,7 @@ class CholmodBase : internal::noncopyable
       eigen_assert(m_analysisIsOk && "You must first call analyzePattern()");
       cholmod_sparse A = viewAsCholmod(matrix.template selfadjointView<UpLo>());
       cholmod_factorize_p(&A, m_shiftOffset, 0, 0, m_cholmodFactor, &m_cholmod);
-      
+
       // If the factorization failed, minor is the column at which it did. On success minor == n.
       this->m_info = (m_cholmodFactor->minor == m_cholmodFactor->n ? Success : NumericalIssue);
       m_factorizationIsOk = true;
@@ -290,20 +282,22 @@ class CholmodBase : internal::noncopyable
     #ifndef EIGEN_PARSED_BY_DOXYGEN
     /** \internal */
     template<typename Rhs,typename Dest>
-    void _solve(const MatrixBase<Rhs> &b, MatrixBase<Dest> &dest) const
+    void _solve_impl(const MatrixBase<Rhs> &b, MatrixBase<Dest> &dest) const
     {
       eigen_assert(m_factorizationIsOk && "The decomposition is not in a valid state for solving, you must first call either compute() or symbolic()/numeric()");
       const Index size = m_cholmodFactor->n;
       EIGEN_UNUSED_VARIABLE(size);
       eigen_assert(size==b.rows());
+      
+      // Cholmod needs column-major stoarge without inner-stride, which corresponds to the default behavior of Ref.
+      Ref<const Matrix<typename Rhs::Scalar,Dynamic,Dynamic,ColMajor> > b_ref(b.derived());
 
-      // note: cd stands for Cholmod Dense
-      Rhs& b_ref(b.const_cast_derived());
       cholmod_dense b_cd = viewAsCholmod(b_ref);
       cholmod_dense* x_cd = cholmod_solve(CHOLMOD_A, m_cholmodFactor, &b_cd, &m_cholmod);
       if(!x_cd)
       {
         this->m_info = NumericalIssue;
+        return;
       }
       // TODO optimize this copy by swapping when possible (be careful with alignment, etc.)
       dest = Matrix<Scalar,Dest::RowsAtCompileTime,Dest::ColsAtCompileTime>::Map(reinterpret_cast<Scalar*>(x_cd->x),b.rows(),b.cols());
@@ -311,8 +305,8 @@ class CholmodBase : internal::noncopyable
     }
     
     /** \internal */
-    template<typename RhsScalar, int RhsOptions, typename RhsIndex, typename DestScalar, int DestOptions, typename DestIndex>
-    void _solve(const SparseMatrix<RhsScalar,RhsOptions,RhsIndex> &b, SparseMatrix<DestScalar,DestOptions,DestIndex> &dest) const
+    template<typename RhsDerived, typename DestDerived>
+    void _solve_impl(const SparseMatrixBase<RhsDerived> &b, SparseMatrixBase<DestDerived> &dest) const
     {
       eigen_assert(m_factorizationIsOk && "The decomposition is not in a valid state for solving, you must first call either compute() or symbolic()/numeric()");
       const Index size = m_cholmodFactor->n;
@@ -320,14 +314,16 @@ class CholmodBase : internal::noncopyable
       eigen_assert(size==b.rows());
 
       // note: cs stands for Cholmod Sparse
-      cholmod_sparse b_cs = viewAsCholmod(b);
+      Ref<SparseMatrix<typename RhsDerived::Scalar,ColMajor,typename RhsDerived::StorageIndex> > b_ref(b.const_cast_derived());
+      cholmod_sparse b_cs = viewAsCholmod(b_ref);
       cholmod_sparse* x_cs = cholmod_spsolve(CHOLMOD_A, m_cholmodFactor, &b_cs, &m_cholmod);
       if(!x_cs)
       {
         this->m_info = NumericalIssue;
+        return;
       }
       // TODO optimize this copy by swapping when possible (be careful with alignment, etc.)
-      dest = viewAsEigen<DestScalar,DestOptions,DestIndex>(*x_cs);
+      dest.derived() = viewAsEigen<typename DestDerived::Scalar,ColMajor,typename DestDerived::StorageIndex>(*x_cs);
       cholmod_free_sparse(&x_cs, &m_cholmod);
     }
     #endif // EIGEN_PARSED_BY_DOXYGEN
@@ -344,10 +340,61 @@ class CholmodBase : internal::noncopyable
       */
     Derived& setShift(const RealScalar& offset)
     {
-      m_shiftOffset[0] = offset;
+      m_shiftOffset[0] = double(offset);
       return derived();
     }
     
+    /** \returns the determinant of the underlying matrix from the current factorization */
+    Scalar determinant() const
+    {
+      using std::exp;
+      return exp(logDeterminant());
+    }
+
+    /** \returns the log determinant of the underlying matrix from the current factorization */
+    Scalar logDeterminant() const
+    {
+      using std::log;
+      using numext::real;
+      eigen_assert(m_factorizationIsOk && "The decomposition is not in a valid state for solving, you must first call either compute() or symbolic()/numeric()");
+
+      RealScalar logDet = 0;
+      Scalar *x = static_cast<Scalar*>(m_cholmodFactor->x);
+      if (m_cholmodFactor->is_super)
+      {
+        // Supernodal factorization stored as a packed list of dense column-major blocs,
+        // as described by the following structure:
+
+        // super[k] == index of the first column of the j-th super node
+        StorageIndex *super = static_cast<StorageIndex*>(m_cholmodFactor->super);
+        // pi[k] == offset to the description of row indices
+        StorageIndex *pi = static_cast<StorageIndex*>(m_cholmodFactor->pi);
+        // px[k] == offset to the respective dense block
+        StorageIndex *px = static_cast<StorageIndex*>(m_cholmodFactor->px);
+
+        Index nb_super_nodes = m_cholmodFactor->nsuper;
+        for (Index k=0; k < nb_super_nodes; ++k)
+        {
+          StorageIndex ncols = super[k + 1] - super[k];
+          StorageIndex nrows = pi[k + 1] - pi[k];
+
+          Map<const Array<Scalar,1,Dynamic>, 0, InnerStride<> > sk(x + px[k], ncols, InnerStride<>(nrows+1));
+          logDet += sk.real().log().sum();
+        }
+      }
+      else
+      {
+        // Simplicial factorization stored as standard CSC matrix.
+        StorageIndex *p = static_cast<StorageIndex*>(m_cholmodFactor->p);
+        Index size = m_cholmodFactor->n;
+        for (Index k=0; k<size; ++k)
+          logDet += log(real( x[p[k]] ));
+      }
+      if (m_cholmodFactor->is_ll)
+        logDet *= 2.0;
+      return logDet;
+    };
+
     template<typename Stream>
     void dumpMemory(Stream& /*s*/)
     {}
@@ -355,9 +402,8 @@ class CholmodBase : internal::noncopyable
   protected:
     mutable cholmod_common m_cholmod;
     cholmod_factor* m_cholmodFactor;
-    RealScalar m_shiftOffset[2];
+    double m_shiftOffset[2];
     mutable ComputationInfo m_info;
-    bool m_isInitialized;
     int m_factorizationIsOk;
     int m_analysisIsOk;
 };
@@ -376,9 +422,13 @@ class CholmodBase : internal::noncopyable
   * \tparam _UpLo the triangular part that will be used for the computations. It can be Lower
   *               or Upper. Default is Lower.
   *
+  * \implsparsesolverconcept
+  *
   * This class supports all kind of SparseMatrix<>: row or column major; upper, lower, or both; compressed or non compressed.
   *
-  * \sa \ref TutorialSparseDirectSolvers, class CholmodSupernodalLLT, class SimplicialLLT
+  * \warning Only double precision real and complex scalar types are supported by Cholmod.
+  *
+  * \sa \ref TutorialSparseSolverConcept, class CholmodSupernodalLLT, class SimplicialLLT
   */
 template<typename _MatrixType, int _UpLo = Lower>
 class CholmodSimplicialLLT : public CholmodBase<_MatrixType, _UpLo, CholmodSimplicialLLT<_MatrixType, _UpLo> >
@@ -395,7 +445,7 @@ class CholmodSimplicialLLT : public CholmodBase<_MatrixType, _UpLo, CholmodSimpl
     CholmodSimplicialLLT(const MatrixType& matrix) : Base()
     {
       init();
-      Base::compute(matrix);
+      this->compute(matrix);
     }
 
     ~CholmodSimplicialLLT() {}
@@ -423,9 +473,13 @@ class CholmodSimplicialLLT : public CholmodBase<_MatrixType, _UpLo, CholmodSimpl
   * \tparam _UpLo the triangular part that will be used for the computations. It can be Lower
   *               or Upper. Default is Lower.
   *
+  * \implsparsesolverconcept
+  *
   * This class supports all kind of SparseMatrix<>: row or column major; upper, lower, or both; compressed or non compressed.
   *
-  * \sa \ref TutorialSparseDirectSolvers, class CholmodSupernodalLLT, class SimplicialLDLT
+  * \warning Only double precision real and complex scalar types are supported by Cholmod.
+  *
+  * \sa \ref TutorialSparseSolverConcept, class CholmodSupernodalLLT, class SimplicialLDLT
   */
 template<typename _MatrixType, int _UpLo = Lower>
 class CholmodSimplicialLDLT : public CholmodBase<_MatrixType, _UpLo, CholmodSimplicialLDLT<_MatrixType, _UpLo> >
@@ -442,7 +496,7 @@ class CholmodSimplicialLDLT : public CholmodBase<_MatrixType, _UpLo, CholmodSimp
     CholmodSimplicialLDLT(const MatrixType& matrix) : Base()
     {
       init();
-      Base::compute(matrix);
+      this->compute(matrix);
     }
 
     ~CholmodSimplicialLDLT() {}
@@ -468,9 +522,13 @@ class CholmodSimplicialLDLT : public CholmodBase<_MatrixType, _UpLo, CholmodSimp
   * \tparam _UpLo the triangular part that will be used for the computations. It can be Lower
   *               or Upper. Default is Lower.
   *
+  * \implsparsesolverconcept
+  *
   * This class supports all kind of SparseMatrix<>: row or column major; upper, lower, or both; compressed or non compressed.
   *
-  * \sa \ref TutorialSparseDirectSolvers
+  * \warning Only double precision real and complex scalar types are supported by Cholmod.
+  *
+  * \sa \ref TutorialSparseSolverConcept
   */
 template<typename _MatrixType, int _UpLo = Lower>
 class CholmodSupernodalLLT : public CholmodBase<_MatrixType, _UpLo, CholmodSupernodalLLT<_MatrixType, _UpLo> >
@@ -487,7 +545,7 @@ class CholmodSupernodalLLT : public CholmodBase<_MatrixType, _UpLo, CholmodSuper
     CholmodSupernodalLLT(const MatrixType& matrix) : Base()
     {
       init();
-      Base::compute(matrix);
+      this->compute(matrix);
     }
 
     ~CholmodSupernodalLLT() {}
@@ -515,9 +573,13 @@ class CholmodSupernodalLLT : public CholmodBase<_MatrixType, _UpLo, CholmodSuper
   * \tparam _UpLo the triangular part that will be used for the computations. It can be Lower
   *               or Upper. Default is Lower.
   *
+  * \implsparsesolverconcept
+  *
   * This class supports all kind of SparseMatrix<>: row or column major; upper, lower, or both; compressed or non compressed.
   *
-  * \sa \ref TutorialSparseDirectSolvers
+  * \warning Only double precision real and complex scalar types are supported by Cholmod.
+  *
+  * \sa \ref TutorialSparseSolverConcept
   */
 template<typename _MatrixType, int _UpLo = Lower>
 class CholmodDecomposition : public CholmodBase<_MatrixType, _UpLo, CholmodDecomposition<_MatrixType, _UpLo> >
@@ -534,7 +596,7 @@ class CholmodDecomposition : public CholmodBase<_MatrixType, _UpLo, CholmodDecom
     CholmodDecomposition(const MatrixType& matrix) : Base()
     {
       init();
-      Base::compute(matrix);
+      this->compute(matrix);
     }
 
     ~CholmodDecomposition() {}
@@ -572,36 +634,6 @@ class CholmodDecomposition : public CholmodBase<_MatrixType, _UpLo, CholmodDecom
     }
 };
 
-namespace internal {
-  
-template<typename _MatrixType, int _UpLo, typename Derived, typename Rhs>
-struct solve_retval<CholmodBase<_MatrixType,_UpLo,Derived>, Rhs>
-  : solve_retval_base<CholmodBase<_MatrixType,_UpLo,Derived>, Rhs>
-{
-  typedef CholmodBase<_MatrixType,_UpLo,Derived> Dec;
-  EIGEN_MAKE_SOLVE_HELPERS(Dec,Rhs)
-
-  template<typename Dest> void evalTo(Dest& dst) const
-  {
-    dec()._solve(rhs(),dst);
-  }
-};
-
-template<typename _MatrixType, int _UpLo, typename Derived, typename Rhs>
-struct sparse_solve_retval<CholmodBase<_MatrixType,_UpLo,Derived>, Rhs>
-  : sparse_solve_retval_base<CholmodBase<_MatrixType,_UpLo,Derived>, Rhs>
-{
-  typedef CholmodBase<_MatrixType,_UpLo,Derived> Dec;
-  EIGEN_MAKE_SPARSE_SOLVE_HELPERS(Dec,Rhs)
-
-  template<typename Dest> void evalTo(Dest& dst) const
-  {
-    dec()._solve(rhs(),dst);
-  }
-};
-
-} // end namespace internal
-
 } // end namespace Eigen
 
 #endif // EIGEN_CHOLMODSUPPORT_H

extern/Eigen3/Eigen/src/Core/Array.h

@@ -12,7 +12,16 @@
 
 namespace Eigen {
 
-/** \class Array 
+namespace internal {
+template<typename _Scalar, int _Rows, int _Cols, int _Options, int _MaxRows, int _MaxCols>
+struct traits<Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> > : traits<Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >
+{
+  typedef ArrayXpr XprKind;
+  typedef ArrayBase<Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> > XprBase;
+};
+}
+
+/** \class Array
   * \ingroup Core_Module
   *
   * \brief General-purpose arrays with easy API for coefficient-wise operations
@@ -24,20 +33,14 @@ namespace Eigen {
   * API for the %Matrix class provides easy access to linear-algebra
   * operations.
   *
-  * This class can be extended with the help of the plugin mechanism described on the page
-  * \ref TopicCustomizingEigen by defining the preprocessor symbol \c EIGEN_ARRAY_PLUGIN.
+  * See documentation of class Matrix for detailed information on the template parameters
+  * storage layout.
   *
-  * \sa \ref TutorialArrayClass, \ref TopicClassHierarchy
+  * This class can be extended with the help of the plugin mechanism described on the page
+  * \ref TopicCustomizing_Plugins by defining the preprocessor symbol \c EIGEN_ARRAY_PLUGIN.
+  *
+  * \sa \blank \ref TutorialArrayClass, \ref TopicClassHierarchy
   */
-namespace internal {
-template<typename _Scalar, int _Rows, int _Cols, int _Options, int _MaxRows, int _MaxCols>
-struct traits<Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> > : traits<Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >
-{
-  typedef ArrayXpr XprKind;
-  typedef ArrayBase<Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> > XprBase;
-};
-}
-
 template<typename _Scalar, int _Rows, int _Cols, int _Options, int _MaxRows, int _MaxCols>
 class Array
   : public PlainObjectBase<Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >
@@ -69,11 +72,27 @@ class Array
       * the usage of 'using'. This should be done only for operator=.
       */
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Array& operator=(const EigenBase<OtherDerived> &other)
     {
       return Base::operator=(other);
     }
 
+    /** Set all the entries to \a value.
+      * \sa DenseBase::setConstant(), DenseBase::fill()
+      */
+    /* This overload is needed because the usage of
+      *   using Base::operator=;
+      * fails on MSVC. Since the code below is working with GCC and MSVC, we skipped
+      * the usage of 'using'. This should be done only for operator=.
+      */
+    EIGEN_DEVICE_FUNC
+    EIGEN_STRONG_INLINE Array& operator=(const Scalar &value)
+    {
+      Base::setConstant(value);
+      return *this;
+    }
+
     /** Copies the value of the expression \a other into \c *this with automatic resizing.
       *
       * *this might be resized to match the dimensions of \a other. If *this was a null matrix (not already initialized),
@@ -84,7 +103,8 @@ class Array
       * remain row-vectors and vectors remain vectors.
       */
     template<typename OtherDerived>
-    EIGEN_STRONG_INLINE Array& operator=(const ArrayBase<OtherDerived>& other)
+    EIGEN_DEVICE_FUNC
+    EIGEN_STRONG_INLINE Array& operator=(const DenseBase<OtherDerived>& other)
     {
       return Base::_set(other);
     }
@@ -92,11 +112,12 @@ class Array
     /** This is a special case of the templated operator=. Its purpose is to
       * prevent a default operator= from hiding the templated operator=.
       */
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Array& operator=(const Array& other)
     {
       return Base::_set(other);
     }
-
+    
     /** Default constructor.
       *
       * For fixed-size matrices, does nothing.
@@ -107,6 +128,7 @@ class Array
       *
       * \sa resize(Index,Index)
       */
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Array() : Base()
     {
       Base::_check_template_params();
@@ -116,6 +138,7 @@ class Array
 #ifndef EIGEN_PARSED_BY_DOXYGEN
     // FIXME is it still needed ??
     /** \internal */
+    EIGEN_DEVICE_FUNC
     Array(internal::constructor_without_unaligned_array_assert)
       : Base(internal::constructor_without_unaligned_array_assert())
     {
@@ -124,56 +147,62 @@ class Array
     }
 #endif
 
-#ifdef EIGEN_HAVE_RVALUE_REFERENCES
-    Array(Array&& other)
+#if EIGEN_HAS_RVALUE_REFERENCES
+    EIGEN_DEVICE_FUNC
+    Array(Array&& other) EIGEN_NOEXCEPT_IF(std::is_nothrow_move_constructible<Scalar>::value)
       : Base(std::move(other))
     {
       Base::_check_template_params();
-      if (RowsAtCompileTime!=Dynamic && ColsAtCompileTime!=Dynamic)
-        Base::_set_noalias(other);
     }
-    Array& operator=(Array&& other)
+    EIGEN_DEVICE_FUNC
+    Array& operator=(Array&& other) EIGEN_NOEXCEPT_IF(std::is_nothrow_move_assignable<Scalar>::value)
     {
       other.swap(*this);
       return *this;
     }
 #endif
 
-    /** Constructs a vector or row-vector with given dimension. \only_for_vectors
-      *
-      * Note that this is only useful for dynamic-size vectors. For fixed-size vectors,
-      * it is redundant to pass the dimension here, so it makes more sense to use the default
-      * constructor Matrix() instead.
-      */
-    EIGEN_STRONG_INLINE explicit Array(Index dim)
-      : Base(dim, RowsAtCompileTime == 1 ? 1 : dim, ColsAtCompileTime == 1 ? 1 : dim)
+    #ifndef EIGEN_PARSED_BY_DOXYGEN
+    template<typename T>
+    EIGEN_DEVICE_FUNC
+    EIGEN_STRONG_INLINE explicit Array(const T& x)
     {
       Base::_check_template_params();
-      EIGEN_STATIC_ASSERT_VECTOR_ONLY(Array)
-      eigen_assert(dim >= 0);
-      eigen_assert(SizeAtCompileTime == Dynamic || SizeAtCompileTime == dim);
-      EIGEN_INITIALIZE_COEFFS_IF_THAT_OPTION_IS_ENABLED
+      Base::template _init1<T>(x);
     }
 
-    #ifndef EIGEN_PARSED_BY_DOXYGEN
     template<typename T0, typename T1>
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Array(const T0& val0, const T1& val1)
     {
       Base::_check_template_params();
       this->template _init2<T0,T1>(val0, val1);
     }
     #else
-    /** constructs an uninitialized matrix with \a rows rows and \a cols columns.
+    /** \brief Constructs a fixed-sized array initialized with coefficients starting at \a data */
+    EIGEN_DEVICE_FUNC explicit Array(const Scalar *data);
+    /** Constructs a vector or row-vector with given dimension. \only_for_vectors
       *
-      * This is useful for dynamic-size matrices. For fixed-size matrices,
+      * Note that this is only useful for dynamic-size vectors. For fixed-size vectors,
+      * it is redundant to pass the dimension here, so it makes more sense to use the default
+      * constructor Array() instead.
+      */
+    EIGEN_DEVICE_FUNC
+    EIGEN_STRONG_INLINE explicit Array(Index dim);
+    /** constructs an initialized 1x1 Array with the given coefficient */
+    Array(const Scalar& value);
+    /** constructs an uninitialized array with \a rows rows and \a cols columns.
+      *
+      * This is useful for dynamic-size arrays. For fixed-size arrays,
       * it is redundant to pass these parameters, so one should use the default constructor
-      * Matrix() instead. */
+      * Array() instead. */
     Array(Index rows, Index cols);
     /** constructs an initialized 2D vector with given coefficients */
     Array(const Scalar& val0, const Scalar& val1);
     #endif
 
     /** constructs an initialized 3D vector with given coefficients */
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Array(const Scalar& val0, const Scalar& val1, const Scalar& val2)
     {
       Base::_check_template_params();
@@ -183,6 +212,7 @@ class Array
       m_storage.data()[2] = val2;
     }
     /** constructs an initialized 4D vector with given coefficients */
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Array(const Scalar& val0, const Scalar& val1, const Scalar& val2, const Scalar& val3)
     {
       Base::_check_template_params();
@@ -193,51 +223,27 @@ class Array
       m_storage.data()[3] = val3;
     }
 
-    explicit Array(const Scalar *data);
-
-    /** Constructor copying the value of the expression \a other */
-    template<typename OtherDerived>
-    EIGEN_STRONG_INLINE Array(const ArrayBase<OtherDerived>& other)
-             : Base(other.rows() * other.cols(), other.rows(), other.cols())
-    {
-      Base::_check_template_params();
-      Base::_set_noalias(other);
-    }
     /** Copy constructor */
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Array(const Array& other)
-            : Base(other.rows() * other.cols(), other.rows(), other.cols())
-    {
-      Base::_check_template_params();
-      Base::_set_noalias(other);
-    }
-    /** Copy constructor with in-place evaluation */
-    template<typename OtherDerived>
-    EIGEN_STRONG_INLINE Array(const ReturnByValue<OtherDerived>& other)
-    {
-      Base::_check_template_params();
-      Base::resize(other.rows(), other.cols());
-      other.evalTo(*this);
-    }
+            : Base(other)
+    { }
+
+  private:
+    struct PrivateType {};
+  public:
 
     /** \sa MatrixBase::operator=(const EigenBase<OtherDerived>&) */
     template<typename OtherDerived>
-    EIGEN_STRONG_INLINE Array(const EigenBase<OtherDerived> &other)
-      : Base(other.derived().rows() * other.derived().cols(), other.derived().rows(), other.derived().cols())
-    {
-      Base::_check_template_params();
-      Base::_resize_to_match(other);
-      *this = other;
-    }
+    EIGEN_DEVICE_FUNC
+    EIGEN_STRONG_INLINE Array(const EigenBase<OtherDerived> &other,
+                              typename internal::enable_if<internal::is_convertible<typename OtherDerived::Scalar,Scalar>::value,
+                                                           PrivateType>::type = PrivateType())
+      : Base(other.derived())
+    { }
 
-    /** Override MatrixBase::swap() since for dynamic-sized matrices of same type it is enough to swap the
-      * data pointers.
-      */
-    template<typename OtherDerived>
-    void swap(ArrayBase<OtherDerived> const & other)
-    { this->_swap(other.derived()); }
-
-    inline Index innerStride() const { return 1; }
-    inline Index outerStride() const { return this->innerSize(); }
+    EIGEN_DEVICE_FUNC inline Index innerStride() const { return 1; }
+    EIGEN_DEVICE_FUNC inline Index outerStride() const { return this->innerSize(); }
 
     #ifdef EIGEN_ARRAY_PLUGIN
     #include EIGEN_ARRAY_PLUGIN

extern/Eigen3/Eigen/src/Core/ArrayBase.h

@@ -32,7 +32,7 @@ template<typename ExpressionType> class MatrixWrapper;
   * \tparam Derived is the derived type, e.g., an array or an expression type.
   *
   * This class can be extended with the help of the plugin mechanism described on the page
-  * \ref TopicCustomizingEigen by defining the preprocessor symbol \c EIGEN_ARRAYBASE_PLUGIN.
+  * \ref TopicCustomizing_Plugins by defining the preprocessor symbol \c EIGEN_ARRAYBASE_PLUGIN.
   *
   * \sa class MatrixBase, \ref TopicClassHierarchy
   */
@@ -47,13 +47,11 @@ template<typename Derived> class ArrayBase
     typedef ArrayBase Eigen_BaseClassForSpecializationOfGlobalMathFuncImpl;
 
     typedef typename internal::traits<Derived>::StorageKind StorageKind;
-    typedef typename internal::traits<Derived>::Index Index;
     typedef typename internal::traits<Derived>::Scalar Scalar;
     typedef typename internal::packet_traits<Scalar>::type PacketScalar;
     typedef typename NumTraits<Scalar>::Real RealScalar;
 
     typedef DenseBase<Derived> Base;
-    using Base::operator*;
     using Base::RowsAtCompileTime;
     using Base::ColsAtCompileTime;
     using Base::SizeAtCompileTime;
@@ -62,8 +60,7 @@ template<typename Derived> class ArrayBase
     using Base::MaxSizeAtCompileTime;
     using Base::IsVectorAtCompileTime;
     using Base::Flags;
-    using Base::CoeffReadCost;
-
+    
     using Base::derived;
     using Base::const_cast_derived;
     using Base::rows;
@@ -83,25 +80,14 @@ template<typename Derived> class ArrayBase
 #endif // not EIGEN_PARSED_BY_DOXYGEN
 
 #ifndef EIGEN_PARSED_BY_DOXYGEN
-    /** \internal the plain matrix type corresponding to this expression. Note that is not necessarily
-      * exactly the return type of eval(): in the case of plain matrices, the return type of eval() is a const
-      * reference to a matrix, not a matrix! It is however guaranteed that the return type of eval() is either
-      * PlainObject or const PlainObject&.
-      */
-    typedef Array<typename internal::traits<Derived>::Scalar,
-                internal::traits<Derived>::RowsAtCompileTime,
-                internal::traits<Derived>::ColsAtCompileTime,
-                AutoAlign | (internal::traits<Derived>::Flags&RowMajorBit ? RowMajor : ColMajor),
-                internal::traits<Derived>::MaxRowsAtCompileTime,
-                internal::traits<Derived>::MaxColsAtCompileTime
-          > PlainObject;
-
+    typedef typename Base::PlainObject PlainObject;
 
     /** \internal Represents a matrix with all coefficients equal to one another*/
-    typedef CwiseNullaryOp<internal::scalar_constant_op<Scalar>,Derived> ConstantReturnType;
+    typedef CwiseNullaryOp<internal::scalar_constant_op<Scalar>,PlainObject> ConstantReturnType;
 #endif // not EIGEN_PARSED_BY_DOXYGEN
 
 #define EIGEN_CURRENT_STORAGE_BASE_CLASS Eigen::ArrayBase
+#define EIGEN_DOC_UNARY_ADDONS(X,Y)
 #   include "../plugins/CommonCwiseUnaryOps.h"
 #   include "../plugins/MatrixCwiseUnaryOps.h"
 #   include "../plugins/ArrayCwiseUnaryOps.h"
@@ -112,44 +98,62 @@ template<typename Derived> class ArrayBase
 #     include EIGEN_ARRAYBASE_PLUGIN
 #   endif
 #undef EIGEN_CURRENT_STORAGE_BASE_CLASS
+#undef EIGEN_DOC_UNARY_ADDONS
 
     /** Special case of the template operator=, in order to prevent the compiler
       * from generating a default operator= (issue hit with g++ 4.1)
       */
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
     Derived& operator=(const ArrayBase& other)
     {
-      return internal::assign_selector<Derived,Derived>::run(derived(), other.derived());
+      internal::call_assignment(derived(), other.derived());
+      return derived();
     }
+    
+    /** Set all the entries to \a value.
+      * \sa DenseBase::setConstant(), DenseBase::fill() */
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+    Derived& operator=(const Scalar &value)
+    { Base::setConstant(value); return derived(); }
 
-    Derived& operator+=(const Scalar& scalar)
-    { return *this = derived() + scalar; }
-    Derived& operator-=(const Scalar& scalar)
-    { return *this = derived() - scalar; }
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+    Derived& operator+=(const Scalar& scalar);
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+    Derived& operator-=(const Scalar& scalar);
 
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
     Derived& operator+=(const ArrayBase<OtherDerived>& other);
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
     Derived& operator-=(const ArrayBase<OtherDerived>& other);
 
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
     Derived& operator*=(const ArrayBase<OtherDerived>& other);
 
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
     Derived& operator/=(const ArrayBase<OtherDerived>& other);
 
   public:
+    EIGEN_DEVICE_FUNC
     ArrayBase<Derived>& array() { return *this; }
+    EIGEN_DEVICE_FUNC
     const ArrayBase<Derived>& array() const { return *this; }
 
     /** \returns an \link Eigen::MatrixBase Matrix \endlink expression of this array
       * \sa MatrixBase::array() */
-    MatrixWrapper<Derived> matrix() { return derived(); }
-    const MatrixWrapper<const Derived> matrix() const { return derived(); }
+    EIGEN_DEVICE_FUNC
+    MatrixWrapper<Derived> matrix() { return MatrixWrapper<Derived>(derived()); }
+    EIGEN_DEVICE_FUNC
+    const MatrixWrapper<const Derived> matrix() const { return MatrixWrapper<const Derived>(derived()); }
 
 //     template<typename Dest>
 //     inline void evalTo(Dest& dst) const { dst = matrix(); }
 
   protected:
+    EIGEN_DEVICE_FUNC
     ArrayBase() : Base() {}
 
   private:
@@ -171,11 +175,10 @@ template<typename Derived> class ArrayBase
   */
 template<typename Derived>
 template<typename OtherDerived>
-EIGEN_STRONG_INLINE Derived &
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived &
 ArrayBase<Derived>::operator-=(const ArrayBase<OtherDerived> &other)
 {
-  SelfCwiseBinaryOp<internal::scalar_difference_op<Scalar>, Derived, OtherDerived> tmp(derived());
-  tmp = other.derived();
+  call_assignment(derived(), other.derived(), internal::sub_assign_op<Scalar,typename OtherDerived::Scalar>());
   return derived();
 }
 
@@ -185,11 +188,10 @@ ArrayBase<Derived>::operator-=(const ArrayBase<OtherDerived> &other)
   */
 template<typename Derived>
 template<typename OtherDerived>
-EIGEN_STRONG_INLINE Derived &
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived &
 ArrayBase<Derived>::operator+=(const ArrayBase<OtherDerived>& other)
 {
-  SelfCwiseBinaryOp<internal::scalar_sum_op<Scalar>, Derived, OtherDerived> tmp(derived());
-  tmp = other.derived();
+  call_assignment(derived(), other.derived(), internal::add_assign_op<Scalar,typename OtherDerived::Scalar>());
   return derived();
 }
 
@@ -199,11 +201,10 @@ ArrayBase<Derived>::operator+=(const ArrayBase<OtherDerived>& other)
   */
 template<typename Derived>
 template<typename OtherDerived>
-EIGEN_STRONG_INLINE Derived &
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived &
 ArrayBase<Derived>::operator*=(const ArrayBase<OtherDerived>& other)
 {
-  SelfCwiseBinaryOp<internal::scalar_product_op<Scalar>, Derived, OtherDerived> tmp(derived());
-  tmp = other.derived();
+  call_assignment(derived(), other.derived(), internal::mul_assign_op<Scalar,typename OtherDerived::Scalar>());
   return derived();
 }
 
@@ -213,11 +214,10 @@ ArrayBase<Derived>::operator*=(const ArrayBase<OtherDerived>& other)
   */
 template<typename Derived>
 template<typename OtherDerived>
-EIGEN_STRONG_INLINE Derived &
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived &
 ArrayBase<Derived>::operator/=(const ArrayBase<OtherDerived>& other)
 {
-  SelfCwiseBinaryOp<internal::scalar_quotient_op<Scalar>, Derived, OtherDerived> tmp(derived());
-  tmp = other.derived();
+  call_assignment(derived(), other.derived(), internal::div_assign_op<Scalar,typename OtherDerived::Scalar>());
   return derived();
 }
 

extern/Eigen3/Eigen/src/Core/ArrayWrapper.h

@@ -32,7 +32,8 @@ struct traits<ArrayWrapper<ExpressionType> >
   // Let's remove NestByRefBit
   enum {
     Flags0 = traits<typename remove_all<typename ExpressionType::Nested>::type >::Flags,
-    Flags = Flags0 & ~NestByRefBit
+    LvalueBitFlag = is_lvalue<ExpressionType>::value ? LvalueBit : 0,
+    Flags = (Flags0 & ~(NestByRefBit | LvalueBit)) | LvalueBitFlag
   };
 };
 }
@@ -44,6 +45,7 @@ class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> >
     typedef ArrayBase<ArrayWrapper> Base;
     EIGEN_DENSE_PUBLIC_INTERFACE(ArrayWrapper)
     EIGEN_INHERIT_ASSIGNMENT_OPERATORS(ArrayWrapper)
+    typedef typename internal::remove_all<ExpressionType>::type NestedExpression;
 
     typedef typename internal::conditional<
                        internal::is_lvalue<ExpressionType>::value,
@@ -51,76 +53,45 @@ class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> >
                        const Scalar
                      >::type ScalarWithConstIfNotLvalue;
 
-    typedef typename internal::nested<ExpressionType>::type NestedExpressionType;
+    typedef typename internal::ref_selector<ExpressionType>::non_const_type NestedExpressionType;
 
-    inline ArrayWrapper(ExpressionType& matrix) : m_expression(matrix) {}
+    using Base::coeffRef;
 
+    EIGEN_DEVICE_FUNC
+    explicit EIGEN_STRONG_INLINE ArrayWrapper(ExpressionType& matrix) : m_expression(matrix) {}
+
+    EIGEN_DEVICE_FUNC
     inline Index rows() const { return m_expression.rows(); }
+    EIGEN_DEVICE_FUNC
     inline Index cols() const { return m_expression.cols(); }
+    EIGEN_DEVICE_FUNC
     inline Index outerStride() const { return m_expression.outerStride(); }
+    EIGEN_DEVICE_FUNC
     inline Index innerStride() const { return m_expression.innerStride(); }
 
-    inline ScalarWithConstIfNotLvalue* data() { return m_expression.const_cast_derived().data(); }
+    EIGEN_DEVICE_FUNC
+    inline ScalarWithConstIfNotLvalue* data() { return m_expression.data(); }
+    EIGEN_DEVICE_FUNC
     inline const Scalar* data() const { return m_expression.data(); }
 
-    inline CoeffReturnType coeff(Index rowId, Index colId) const
-    {
-      return m_expression.coeff(rowId, colId);
-    }
-
-    inline Scalar& coeffRef(Index rowId, Index colId)
-    {
-      return m_expression.const_cast_derived().coeffRef(rowId, colId);
-    }
-
+    EIGEN_DEVICE_FUNC
     inline const Scalar& coeffRef(Index rowId, Index colId) const
     {
-      return m_expression.const_cast_derived().coeffRef(rowId, colId);
-    }
-
-    inline CoeffReturnType coeff(Index index) const
-    {
-      return m_expression.coeff(index);
-    }
-
-    inline Scalar& coeffRef(Index index)
-    {
-      return m_expression.const_cast_derived().coeffRef(index);
+      return m_expression.coeffRef(rowId, colId);
     }
 
+    EIGEN_DEVICE_FUNC
     inline const Scalar& coeffRef(Index index) const
     {
-      return m_expression.const_cast_derived().coeffRef(index);
-    }
-
-    template<int LoadMode>
-    inline const PacketScalar packet(Index rowId, Index colId) const
-    {
-      return m_expression.template packet<LoadMode>(rowId, colId);
-    }
-
-    template<int LoadMode>
-    inline void writePacket(Index rowId, Index colId, const PacketScalar& val)
-    {
-      m_expression.const_cast_derived().template writePacket<LoadMode>(rowId, colId, val);
-    }
-
-    template<int LoadMode>
-    inline const PacketScalar packet(Index index) const
-    {
-      return m_expression.template packet<LoadMode>(index);
-    }
-
-    template<int LoadMode>
-    inline void writePacket(Index index, const PacketScalar& val)
-    {
-      m_expression.const_cast_derived().template writePacket<LoadMode>(index, val);
+      return m_expression.coeffRef(index);
     }
 
     template<typename Dest>
+    EIGEN_DEVICE_FUNC
     inline void evalTo(Dest& dst) const { dst = m_expression; }
 
     const typename internal::remove_all<NestedExpressionType>::type& 
+    EIGEN_DEVICE_FUNC
     nestedExpression() const 
     {
       return m_expression;
@@ -128,10 +99,12 @@ class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> >
 
     /** Forwards the resizing request to the nested expression
       * \sa DenseBase::resize(Index)  */
-    void resize(Index newSize) { m_expression.const_cast_derived().resize(newSize); }
+    EIGEN_DEVICE_FUNC
+    void resize(Index newSize) { m_expression.resize(newSize); }
     /** Forwards the resizing request to the nested expression
       * \sa DenseBase::resize(Index,Index)*/
-    void resize(Index nbRows, Index nbCols) { m_expression.const_cast_derived().resize(nbRows,nbCols); }
+    EIGEN_DEVICE_FUNC
+    void resize(Index rows, Index cols) { m_expression.resize(rows,cols); }
 
   protected:
     NestedExpressionType m_expression;
@@ -157,7 +130,8 @@ struct traits<MatrixWrapper<ExpressionType> >
   // Let's remove NestByRefBit
   enum {
     Flags0 = traits<typename remove_all<typename ExpressionType::Nested>::type >::Flags,
-    Flags = Flags0 & ~NestByRefBit
+    LvalueBitFlag = is_lvalue<ExpressionType>::value ? LvalueBit : 0,
+    Flags = (Flags0 & ~(NestByRefBit | LvalueBit)) | LvalueBitFlag
   };
 };
 }
@@ -169,6 +143,7 @@ class MatrixWrapper : public MatrixBase<MatrixWrapper<ExpressionType> >
     typedef MatrixBase<MatrixWrapper<ExpressionType> > Base;
     EIGEN_DENSE_PUBLIC_INTERFACE(MatrixWrapper)
     EIGEN_INHERIT_ASSIGNMENT_OPERATORS(MatrixWrapper)
+    typedef typename internal::remove_all<ExpressionType>::type NestedExpression;
 
     typedef typename internal::conditional<
                        internal::is_lvalue<ExpressionType>::value,
@@ -176,72 +151,40 @@ class MatrixWrapper : public MatrixBase<MatrixWrapper<ExpressionType> >
                        const Scalar
                      >::type ScalarWithConstIfNotLvalue;
 
-    typedef typename internal::nested<ExpressionType>::type NestedExpressionType;
+    typedef typename internal::ref_selector<ExpressionType>::non_const_type NestedExpressionType;
 
-    inline MatrixWrapper(ExpressionType& a_matrix) : m_expression(a_matrix) {}
+    using Base::coeffRef;
 
+    EIGEN_DEVICE_FUNC
+    explicit inline MatrixWrapper(ExpressionType& matrix) : m_expression(matrix) {}
+
+    EIGEN_DEVICE_FUNC
     inline Index rows() const { return m_expression.rows(); }
+    EIGEN_DEVICE_FUNC
     inline Index cols() const { return m_expression.cols(); }
+    EIGEN_DEVICE_FUNC
     inline Index outerStride() const { return m_expression.outerStride(); }
+    EIGEN_DEVICE_FUNC
     inline Index innerStride() const { return m_expression.innerStride(); }
 
-    inline ScalarWithConstIfNotLvalue* data() { return m_expression.const_cast_derived().data(); }
+    EIGEN_DEVICE_FUNC
+    inline ScalarWithConstIfNotLvalue* data() { return m_expression.data(); }
+    EIGEN_DEVICE_FUNC
     inline const Scalar* data() const { return m_expression.data(); }
 
-    inline CoeffReturnType coeff(Index rowId, Index colId) const
-    {
-      return m_expression.coeff(rowId, colId);
-    }
-
-    inline Scalar& coeffRef(Index rowId, Index colId)
-    {
-      return m_expression.const_cast_derived().coeffRef(rowId, colId);
-    }
-
+    EIGEN_DEVICE_FUNC
     inline const Scalar& coeffRef(Index rowId, Index colId) const
     {
       return m_expression.derived().coeffRef(rowId, colId);
     }
 
-    inline CoeffReturnType coeff(Index index) const
-    {
-      return m_expression.coeff(index);
-    }
-
-    inline Scalar& coeffRef(Index index)
-    {
-      return m_expression.const_cast_derived().coeffRef(index);
-    }
-
+    EIGEN_DEVICE_FUNC
     inline const Scalar& coeffRef(Index index) const
     {
-      return m_expression.const_cast_derived().coeffRef(index);
-    }
-
-    template<int LoadMode>
-    inline const PacketScalar packet(Index rowId, Index colId) const
-    {
-      return m_expression.template packet<LoadMode>(rowId, colId);
-    }
-
-    template<int LoadMode>
-    inline void writePacket(Index rowId, Index colId, const PacketScalar& val)
-    {
-      m_expression.const_cast_derived().template writePacket<LoadMode>(rowId, colId, val);
-    }
-
-    template<int LoadMode>
-    inline const PacketScalar packet(Index index) const
-    {
-      return m_expression.template packet<LoadMode>(index);
-    }
-
-    template<int LoadMode>
-    inline void writePacket(Index index, const PacketScalar& val)
-    {
-      m_expression.const_cast_derived().template writePacket<LoadMode>(index, val);
+      return m_expression.coeffRef(index);
     }
 
+    EIGEN_DEVICE_FUNC
     const typename internal::remove_all<NestedExpressionType>::type& 
     nestedExpression() const 
     {
@@ -250,10 +193,12 @@ class MatrixWrapper : public MatrixBase<MatrixWrapper<ExpressionType> >
 
     /** Forwards the resizing request to the nested expression
       * \sa DenseBase::resize(Index)  */
-    void resize(Index newSize) { m_expression.const_cast_derived().resize(newSize); }
+    EIGEN_DEVICE_FUNC
+    void resize(Index newSize) { m_expression.resize(newSize); }
     /** Forwards the resizing request to the nested expression
       * \sa DenseBase::resize(Index,Index)*/
-    void resize(Index nbRows, Index nbCols) { m_expression.const_cast_derived().resize(nbRows,nbCols); }
+    EIGEN_DEVICE_FUNC
+    void resize(Index rows, Index cols) { m_expression.resize(rows,cols); }
 
   protected:
     NestedExpressionType m_expression;

extern/Eigen3/Eigen/src/Core/Assign.h

@@ -14,478 +14,6 @@
 
 namespace Eigen {
 
-namespace internal {
-
-/***************************************************************************
-* Part 1 : the logic deciding a strategy for traversal and unrolling       *
-***************************************************************************/
-
-template <typename Derived, typename OtherDerived>
-struct assign_traits
-{
-public:
-  enum {
-    DstIsAligned = Derived::Flags & AlignedBit,
-    DstHasDirectAccess = Derived::Flags & DirectAccessBit,
-    SrcIsAligned = OtherDerived::Flags & AlignedBit,
-    JointAlignment = bool(DstIsAligned) && bool(SrcIsAligned) ? Aligned : Unaligned
-  };
-
-private:
-  enum {
-    InnerSize = int(Derived::IsVectorAtCompileTime) ? int(Derived::SizeAtCompileTime)
-              : int(Derived::Flags)&RowMajorBit ? int(Derived::ColsAtCompileTime)
-              : int(Derived::RowsAtCompileTime),
-    InnerMaxSize = int(Derived::IsVectorAtCompileTime) ? int(Derived::MaxSizeAtCompileTime)
-              : int(Derived::Flags)&RowMajorBit ? int(Derived::MaxColsAtCompileTime)
-              : int(Derived::MaxRowsAtCompileTime),
-    MaxSizeAtCompileTime = Derived::SizeAtCompileTime,
-    PacketSize = packet_traits<typename Derived::Scalar>::size
-  };
-
-  enum {
-    StorageOrdersAgree = (int(Derived::IsRowMajor) == int(OtherDerived::IsRowMajor)),
-    MightVectorize = StorageOrdersAgree
-                  && (int(Derived::Flags) & int(OtherDerived::Flags) & ActualPacketAccessBit),
-    MayInnerVectorize  = MightVectorize && int(InnerSize)!=Dynamic && int(InnerSize)%int(PacketSize)==0
-                       && int(DstIsAligned) && int(SrcIsAligned),
-    MayLinearize = StorageOrdersAgree && (int(Derived::Flags) & int(OtherDerived::Flags) & LinearAccessBit),
-    MayLinearVectorize = MightVectorize && MayLinearize && DstHasDirectAccess
-                       && (DstIsAligned || MaxSizeAtCompileTime == Dynamic),
-      /* If the destination isn't aligned, we have to do runtime checks and we don't unroll,
-         so it's only good for large enough sizes. */
-    MaySliceVectorize  = MightVectorize && DstHasDirectAccess
-                       && (int(InnerMaxSize)==Dynamic || int(InnerMaxSize)>=3*PacketSize)
-      /* slice vectorization can be slow, so we only want it if the slices are big, which is
-         indicated by InnerMaxSize rather than InnerSize, think of the case of a dynamic block
-         in a fixed-size matrix */
-  };
-
-public:
-  enum {
-    Traversal = int(MayInnerVectorize)  ? int(InnerVectorizedTraversal)
-              : int(MayLinearVectorize) ? int(LinearVectorizedTraversal)
-              : int(MaySliceVectorize)  ? int(SliceVectorizedTraversal)
-              : int(MayLinearize)       ? int(LinearTraversal)
-                                        : int(DefaultTraversal),
-    Vectorized = int(Traversal) == InnerVectorizedTraversal
-              || int(Traversal) == LinearVectorizedTraversal
-              || int(Traversal) == SliceVectorizedTraversal
-  };
-
-private:
-  enum {
-    UnrollingLimit      = EIGEN_UNROLLING_LIMIT * (Vectorized ? int(PacketSize) : 1),
-    MayUnrollCompletely = int(Derived::SizeAtCompileTime) != Dynamic
-                       && int(OtherDerived::CoeffReadCost) != Dynamic
-                       && int(Derived::SizeAtCompileTime) * int(OtherDerived::CoeffReadCost) <= int(UnrollingLimit),
-    MayUnrollInner      = int(InnerSize) != Dynamic
-                       && int(OtherDerived::CoeffReadCost) != Dynamic
-                       && int(InnerSize) * int(OtherDerived::CoeffReadCost) <= int(UnrollingLimit)
-  };
-
-public:
-  enum {
-    Unrolling = (int(Traversal) == int(InnerVectorizedTraversal) || int(Traversal) == int(DefaultTraversal))
-                ? (
-                    int(MayUnrollCompletely) ? int(CompleteUnrolling)
-                  : int(MayUnrollInner)      ? int(InnerUnrolling)
-                                             : int(NoUnrolling)
-                  )
-              : int(Traversal) == int(LinearVectorizedTraversal)
-                ? ( bool(MayUnrollCompletely) && bool(DstIsAligned) ? int(CompleteUnrolling) : int(NoUnrolling) )
-              : int(Traversal) == int(LinearTraversal)
-                ? ( bool(MayUnrollCompletely) ? int(CompleteUnrolling) : int(NoUnrolling) )
-              : int(NoUnrolling)
-  };
-
-#ifdef EIGEN_DEBUG_ASSIGN
-  static void debug()
-  {
-    EIGEN_DEBUG_VAR(DstIsAligned)
-    EIGEN_DEBUG_VAR(SrcIsAligned)
-    EIGEN_DEBUG_VAR(JointAlignment)
-    EIGEN_DEBUG_VAR(InnerSize)
-    EIGEN_DEBUG_VAR(InnerMaxSize)
-    EIGEN_DEBUG_VAR(PacketSize)
-    EIGEN_DEBUG_VAR(StorageOrdersAgree)
-    EIGEN_DEBUG_VAR(MightVectorize)
-    EIGEN_DEBUG_VAR(MayLinearize)
-    EIGEN_DEBUG_VAR(MayInnerVectorize)
-    EIGEN_DEBUG_VAR(MayLinearVectorize)
-    EIGEN_DEBUG_VAR(MaySliceVectorize)
-    EIGEN_DEBUG_VAR(Traversal)
-    EIGEN_DEBUG_VAR(UnrollingLimit)
-    EIGEN_DEBUG_VAR(MayUnrollCompletely)
-    EIGEN_DEBUG_VAR(MayUnrollInner)
-    EIGEN_DEBUG_VAR(Unrolling)
-  }
-#endif
-};
-
-/***************************************************************************
-* Part 2 : meta-unrollers
-***************************************************************************/
-
-/************************
-*** Default traversal ***
-************************/
-
-template<typename Derived1, typename Derived2, int Index, int Stop>
-struct assign_DefaultTraversal_CompleteUnrolling
-{
-  enum {
-    outer = Index / Derived1::InnerSizeAtCompileTime,
-    inner = Index % Derived1::InnerSizeAtCompileTime
-  };
-
-  static EIGEN_STRONG_INLINE void run(Derived1 &dst, const Derived2 &src)
-  {
-    dst.copyCoeffByOuterInner(outer, inner, src);
-    assign_DefaultTraversal_CompleteUnrolling<Derived1, Derived2, Index+1, Stop>::run(dst, src);
-  }
-};
-
-template<typename Derived1, typename Derived2, int Stop>
-struct assign_DefaultTraversal_CompleteUnrolling<Derived1, Derived2, Stop, Stop>
-{
-  static EIGEN_STRONG_INLINE void run(Derived1 &, const Derived2 &) {}
-};
-
-template<typename Derived1, typename Derived2, int Index, int Stop>
-struct assign_DefaultTraversal_InnerUnrolling
-{
-  static EIGEN_STRONG_INLINE void run(Derived1 &dst, const Derived2 &src, typename Derived1::Index outer)
-  {
-    dst.copyCoeffByOuterInner(outer, Index, src);
-    assign_DefaultTraversal_InnerUnrolling<Derived1, Derived2, Index+1, Stop>::run(dst, src, outer);
-  }
-};
-
-template<typename Derived1, typename Derived2, int Stop>
-struct assign_DefaultTraversal_InnerUnrolling<Derived1, Derived2, Stop, Stop>
-{
-  static EIGEN_STRONG_INLINE void run(Derived1 &, const Derived2 &, typename Derived1::Index) {}
-};
-
-/***********************
-*** Linear traversal ***
-***********************/
-
-template<typename Derived1, typename Derived2, int Index, int Stop>
-struct assign_LinearTraversal_CompleteUnrolling
-{
-  static EIGEN_STRONG_INLINE void run(Derived1 &dst, const Derived2 &src)
-  {
-    dst.copyCoeff(Index, src);
-    assign_LinearTraversal_CompleteUnrolling<Derived1, Derived2, Index+1, Stop>::run(dst, src);
-  }
-};
-
-template<typename Derived1, typename Derived2, int Stop>
-struct assign_LinearTraversal_CompleteUnrolling<Derived1, Derived2, Stop, Stop>
-{
-  static EIGEN_STRONG_INLINE void run(Derived1 &, const Derived2 &) {}
-};
-
-/**************************
-*** Inner vectorization ***
-**************************/
-
-template<typename Derived1, typename Derived2, int Index, int Stop>
-struct assign_innervec_CompleteUnrolling
-{
-  enum {
-    outer = Index / Derived1::InnerSizeAtCompileTime,
-    inner = Index % Derived1::InnerSizeAtCompileTime,
-    JointAlignment = assign_traits<Derived1,Derived2>::JointAlignment
-  };
-
-  static EIGEN_STRONG_INLINE void run(Derived1 &dst, const Derived2 &src)
-  {
-    dst.template copyPacketByOuterInner<Derived2, Aligned, JointAlignment>(outer, inner, src);
-    assign_innervec_CompleteUnrolling<Derived1, Derived2,
-      Index+packet_traits<typename Derived1::Scalar>::size, Stop>::run(dst, src);
-  }
-};
-
-template<typename Derived1, typename Derived2, int Stop>
-struct assign_innervec_CompleteUnrolling<Derived1, Derived2, Stop, Stop>
-{
-  static EIGEN_STRONG_INLINE void run(Derived1 &, const Derived2 &) {}
-};
-
-template<typename Derived1, typename Derived2, int Index, int Stop>
-struct assign_innervec_InnerUnrolling
-{
-  static EIGEN_STRONG_INLINE void run(Derived1 &dst, const Derived2 &src, typename Derived1::Index outer)
-  {
-    dst.template copyPacketByOuterInner<Derived2, Aligned, Aligned>(outer, Index, src);
-    assign_innervec_InnerUnrolling<Derived1, Derived2,
-      Index+packet_traits<typename Derived1::Scalar>::size, Stop>::run(dst, src, outer);
-  }
-};
-
-template<typename Derived1, typename Derived2, int Stop>
-struct assign_innervec_InnerUnrolling<Derived1, Derived2, Stop, Stop>
-{
-  static EIGEN_STRONG_INLINE void run(Derived1 &, const Derived2 &, typename Derived1::Index) {}
-};
-
-/***************************************************************************
-* Part 3 : implementation of all cases
-***************************************************************************/
-
-template<typename Derived1, typename Derived2,
-         int Traversal = assign_traits<Derived1, Derived2>::Traversal,
-         int Unrolling = assign_traits<Derived1, Derived2>::Unrolling,
-         int Version = Specialized>
-struct assign_impl;
-
-/************************
-*** Default traversal ***
-************************/
-
-template<typename Derived1, typename Derived2, int Unrolling, int Version>
-struct assign_impl<Derived1, Derived2, InvalidTraversal, Unrolling, Version>
-{
-  static inline void run(Derived1 &, const Derived2 &) { }
-};
-
-template<typename Derived1, typename Derived2, int Version>
-struct assign_impl<Derived1, Derived2, DefaultTraversal, NoUnrolling, Version>
-{
-  typedef typename Derived1::Index Index;
-  static inline void run(Derived1 &dst, const Derived2 &src)
-  {
-    const Index innerSize = dst.innerSize();
-    const Index outerSize = dst.outerSize();
-    for(Index outer = 0; outer < outerSize; ++outer)
-      for(Index inner = 0; inner < innerSize; ++inner)
-        dst.copyCoeffByOuterInner(outer, inner, src);
-  }
-};
-
-template<typename Derived1, typename Derived2, int Version>
-struct assign_impl<Derived1, Derived2, DefaultTraversal, CompleteUnrolling, Version>
-{
-  static EIGEN_STRONG_INLINE void run(Derived1 &dst, const Derived2 &src)
-  {
-    assign_DefaultTraversal_CompleteUnrolling<Derived1, Derived2, 0, Derived1::SizeAtCompileTime>
-      ::run(dst, src);
-  }
-};
-
-template<typename Derived1, typename Derived2, int Version>
-struct assign_impl<Derived1, Derived2, DefaultTraversal, InnerUnrolling, Version>
-{
-  typedef typename Derived1::Index Index;
-  static EIGEN_STRONG_INLINE void run(Derived1 &dst, const Derived2 &src)
-  {
-    const Index outerSize = dst.outerSize();
-    for(Index outer = 0; outer < outerSize; ++outer)
-      assign_DefaultTraversal_InnerUnrolling<Derived1, Derived2, 0, Derived1::InnerSizeAtCompileTime>
-        ::run(dst, src, outer);
-  }
-};
-
-/***********************
-*** Linear traversal ***
-***********************/
-
-template<typename Derived1, typename Derived2, int Version>
-struct assign_impl<Derived1, Derived2, LinearTraversal, NoUnrolling, Version>
-{
-  typedef typename Derived1::Index Index;
-  static inline void run(Derived1 &dst, const Derived2 &src)
-  {
-    const Index size = dst.size();
-    for(Index i = 0; i < size; ++i)
-      dst.copyCoeff(i, src);
-  }
-};
-
-template<typename Derived1, typename Derived2, int Version>
-struct assign_impl<Derived1, Derived2, LinearTraversal, CompleteUnrolling, Version>
-{
-  static EIGEN_STRONG_INLINE void run(Derived1 &dst, const Derived2 &src)
-  {
-    assign_LinearTraversal_CompleteUnrolling<Derived1, Derived2, 0, Derived1::SizeAtCompileTime>
-      ::run(dst, src);
-  }
-};
-
-/**************************
-*** Inner vectorization ***
-**************************/
-
-template<typename Derived1, typename Derived2, int Version>
-struct assign_impl<Derived1, Derived2, InnerVectorizedTraversal, NoUnrolling, Version>
-{
-  typedef typename Derived1::Index Index;
-  static inline void run(Derived1 &dst, const Derived2 &src)
-  {
-    const Index innerSize = dst.innerSize();
-    const Index outerSize = dst.outerSize();
-    const Index packetSize = packet_traits<typename Derived1::Scalar>::size;
-    for(Index outer = 0; outer < outerSize; ++outer)
-      for(Index inner = 0; inner < innerSize; inner+=packetSize)
-        dst.template copyPacketByOuterInner<Derived2, Aligned, Aligned>(outer, inner, src);
-  }
-};
-
-template<typename Derived1, typename Derived2, int Version>
-struct assign_impl<Derived1, Derived2, InnerVectorizedTraversal, CompleteUnrolling, Version>
-{
-  static EIGEN_STRONG_INLINE void run(Derived1 &dst, const Derived2 &src)
-  {
-    assign_innervec_CompleteUnrolling<Derived1, Derived2, 0, Derived1::SizeAtCompileTime>
-      ::run(dst, src);
-  }
-};
-
-template<typename Derived1, typename Derived2, int Version>
-struct assign_impl<Derived1, Derived2, InnerVectorizedTraversal, InnerUnrolling, Version>
-{
-  typedef typename Derived1::Index Index;
-  static EIGEN_STRONG_INLINE void run(Derived1 &dst, const Derived2 &src)
-  {
-    const Index outerSize = dst.outerSize();
-    for(Index outer = 0; outer < outerSize; ++outer)
-      assign_innervec_InnerUnrolling<Derived1, Derived2, 0, Derived1::InnerSizeAtCompileTime>
-        ::run(dst, src, outer);
-  }
-};
-
-/***************************
-*** Linear vectorization ***
-***************************/
-
-template <bool IsAligned = false>
-struct unaligned_assign_impl
-{
-  template <typename Derived, typename OtherDerived>
-  static EIGEN_STRONG_INLINE void run(const Derived&, OtherDerived&, typename Derived::Index, typename Derived::Index) {}
-};
-
-template <>
-struct unaligned_assign_impl<false>
-{
-  // MSVC must not inline this functions. If it does, it fails to optimize the
-  // packet access path.
-#ifdef _MSC_VER
-  template <typename Derived, typename OtherDerived>
-  static EIGEN_DONT_INLINE void run(const Derived& src, OtherDerived& dst, typename Derived::Index start, typename Derived::Index end)
-#else
-  template <typename Derived, typename OtherDerived>
-  static EIGEN_STRONG_INLINE void run(const Derived& src, OtherDerived& dst, typename Derived::Index start, typename Derived::Index end)
-#endif
-  {
-    for (typename Derived::Index index = start; index < end; ++index)
-      dst.copyCoeff(index, src);
-  }
-};
-
-template<typename Derived1, typename Derived2, int Version>
-struct assign_impl<Derived1, Derived2, LinearVectorizedTraversal, NoUnrolling, Version>
-{
-  typedef typename Derived1::Index Index;
-  static EIGEN_STRONG_INLINE void run(Derived1 &dst, const Derived2 &src)
-  {
-    const Index size = dst.size();
-    typedef packet_traits<typename Derived1::Scalar> PacketTraits;
-    enum {
-      packetSize = PacketTraits::size,
-      dstAlignment = PacketTraits::AlignedOnScalar ? Aligned : int(assign_traits<Derived1,Derived2>::DstIsAligned) ,
-      srcAlignment = assign_traits<Derived1,Derived2>::JointAlignment
-    };
-    const Index alignedStart = assign_traits<Derived1,Derived2>::DstIsAligned ? 0
-                             : internal::first_aligned(&dst.coeffRef(0), size);
-    const Index alignedEnd = alignedStart + ((size-alignedStart)/packetSize)*packetSize;
-
-    unaligned_assign_impl<assign_traits<Derived1,Derived2>::DstIsAligned!=0>::run(src,dst,0,alignedStart);
-
-    for(Index index = alignedStart; index < alignedEnd; index += packetSize)
-    {
-      dst.template copyPacket<Derived2, dstAlignment, srcAlignment>(index, src);
-    }
-
-    unaligned_assign_impl<>::run(src,dst,alignedEnd,size);
-  }
-};
-
-template<typename Derived1, typename Derived2, int Version>
-struct assign_impl<Derived1, Derived2, LinearVectorizedTraversal, CompleteUnrolling, Version>
-{
-  typedef typename Derived1::Index Index;
-  static EIGEN_STRONG_INLINE void run(Derived1 &dst, const Derived2 &src)
-  {
-    enum { size = Derived1::SizeAtCompileTime,
-           packetSize = packet_traits<typename Derived1::Scalar>::size,
-           alignedSize = (size/packetSize)*packetSize };
-
-    assign_innervec_CompleteUnrolling<Derived1, Derived2, 0, alignedSize>::run(dst, src);
-    assign_DefaultTraversal_CompleteUnrolling<Derived1, Derived2, alignedSize, size>::run(dst, src);
-  }
-};
-
-/**************************
-*** Slice vectorization ***
-***************************/
-
-template<typename Derived1, typename Derived2, int Version>
-struct assign_impl<Derived1, Derived2, SliceVectorizedTraversal, NoUnrolling, Version>
-{
-  typedef typename Derived1::Index Index;
-  static inline void run(Derived1 &dst, const Derived2 &src)
-  {
-    typedef typename Derived1::Scalar Scalar;
-    typedef packet_traits<Scalar> PacketTraits;
-    enum {
-      packetSize = PacketTraits::size,
-      alignable = PacketTraits::AlignedOnScalar,
-      dstIsAligned = assign_traits<Derived1,Derived2>::DstIsAligned,
-      dstAlignment = alignable ? Aligned : int(dstIsAligned),
-      srcAlignment = assign_traits<Derived1,Derived2>::JointAlignment
-    };
-    const Scalar *dst_ptr = &dst.coeffRef(0,0);
-    if((!bool(dstIsAligned)) && (size_t(dst_ptr) % sizeof(Scalar))>0)
-    {
-      // the pointer is not aligend-on scalar, so alignment is not possible
-      return assign_impl<Derived1,Derived2,DefaultTraversal,NoUnrolling>::run(dst, src);
-    }
-    const Index packetAlignedMask = packetSize - 1;
-    const Index innerSize = dst.innerSize();
-    const Index outerSize = dst.outerSize();
-    const Index alignedStep = alignable ? (packetSize - dst.outerStride() % packetSize) & packetAlignedMask : 0;
-    Index alignedStart = ((!alignable) || bool(dstIsAligned)) ? 0 : internal::first_aligned(dst_ptr, innerSize);
-
-    for(Index outer = 0; outer < outerSize; ++outer)
-    {
-      const Index alignedEnd = alignedStart + ((innerSize-alignedStart) & ~packetAlignedMask);
-      // do the non-vectorizable part of the assignment
-      for(Index inner = 0; inner<alignedStart ; ++inner)
-        dst.copyCoeffByOuterInner(outer, inner, src);
-
-      // do the vectorizable part of the assignment
-      for(Index inner = alignedStart; inner<alignedEnd; inner+=packetSize)
-        dst.template copyPacketByOuterInner<Derived2, dstAlignment, Unaligned>(outer, inner, src);
-
-      // do the non-vectorizable part of the assignment
-      for(Index inner = alignedEnd; inner<innerSize ; ++inner)
-        dst.copyCoeffByOuterInner(outer, inner, src);
-
-      alignedStart = std::min<Index>((alignedStart+alignedStep)%packetSize, innerSize);
-    }
-  }
-};
-
-} // end namespace internal
-
-/***************************************************************************
-* Part 4 : implementation of DenseBase methods
-***************************************************************************/
-
 template<typename Derived>
 template<typename OtherDerived>
 EIGEN_STRONG_INLINE Derived& DenseBase<Derived>
@@ -499,90 +27,62 @@ EIGEN_STRONG_INLINE Derived& DenseBase<Derived>
   EIGEN_STATIC_ASSERT_SAME_MATRIX_SIZE(Derived,OtherDerived)
   EIGEN_STATIC_ASSERT(SameType,YOU_MIXED_DIFFERENT_NUMERIC_TYPES__YOU_NEED_TO_USE_THE_CAST_METHOD_OF_MATRIXBASE_TO_CAST_NUMERIC_TYPES_EXPLICITLY)
 
-#ifdef EIGEN_DEBUG_ASSIGN
-  internal::assign_traits<Derived, OtherDerived>::debug();
-#endif
   eigen_assert(rows() == other.rows() && cols() == other.cols());
-  internal::assign_impl<Derived, OtherDerived, int(SameType) ? int(internal::assign_traits<Derived, OtherDerived>::Traversal)
-                                                       : int(InvalidTraversal)>::run(derived(),other.derived());
-#ifndef EIGEN_NO_DEBUG
-  checkTransposeAliasing(other.derived());
-#endif
+  internal::call_assignment_no_alias(derived(),other.derived());
+  
   return derived();
 }
 
-namespace internal {
-
-template<typename Derived, typename OtherDerived,
-         bool EvalBeforeAssigning = (int(internal::traits<OtherDerived>::Flags) & EvalBeforeAssigningBit) != 0,
-         bool NeedToTranspose = ((int(Derived::RowsAtCompileTime) == 1 && int(OtherDerived::ColsAtCompileTime) == 1)
-                              |   // FIXME | instead of || to please GCC 4.4.0 stupid warning "suggest parentheses around &&".
-                                  // revert to || as soon as not needed anymore.
-                                  (int(Derived::ColsAtCompileTime) == 1 && int(OtherDerived::RowsAtCompileTime) == 1))
-                              && int(Derived::SizeAtCompileTime) != 1>
-struct assign_selector;
-
-template<typename Derived, typename OtherDerived>
-struct assign_selector<Derived,OtherDerived,false,false> {
-  static EIGEN_STRONG_INLINE Derived& run(Derived& dst, const OtherDerived& other) { return dst.lazyAssign(other.derived()); }
-  template<typename ActualDerived, typename ActualOtherDerived>
-  static EIGEN_STRONG_INLINE Derived& evalTo(ActualDerived& dst, const ActualOtherDerived& other) { other.evalTo(dst); return dst; }
-};
-template<typename Derived, typename OtherDerived>
-struct assign_selector<Derived,OtherDerived,true,false> {
-  static EIGEN_STRONG_INLINE Derived& run(Derived& dst, const OtherDerived& other) { return dst.lazyAssign(other.eval()); }
-};
-template<typename Derived, typename OtherDerived>
-struct assign_selector<Derived,OtherDerived,false,true> {
-  static EIGEN_STRONG_INLINE Derived& run(Derived& dst, const OtherDerived& other) { return dst.lazyAssign(other.transpose()); }
-  template<typename ActualDerived, typename ActualOtherDerived>
-  static EIGEN_STRONG_INLINE Derived& evalTo(ActualDerived& dst, const ActualOtherDerived& other) { Transpose<ActualDerived> dstTrans(dst); other.evalTo(dstTrans); return dst; }
-};
-template<typename Derived, typename OtherDerived>
-struct assign_selector<Derived,OtherDerived,true,true> {
-  static EIGEN_STRONG_INLINE Derived& run(Derived& dst, const OtherDerived& other) { return dst.lazyAssign(other.transpose().eval()); }
-};
-
-} // end namespace internal
-
 template<typename Derived>
 template<typename OtherDerived>
+EIGEN_DEVICE_FUNC
 EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::operator=(const DenseBase<OtherDerived>& other)
 {
-  return internal::assign_selector<Derived,OtherDerived>::run(derived(), other.derived());
+  internal::call_assignment(derived(), other.derived());
+  return derived();
 }
 
 template<typename Derived>
+EIGEN_DEVICE_FUNC
 EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::operator=(const DenseBase& other)
 {
-  return internal::assign_selector<Derived,Derived>::run(derived(), other.derived());
+  internal::call_assignment(derived(), other.derived());
+  return derived();
 }
 
 template<typename Derived>
+EIGEN_DEVICE_FUNC
 EIGEN_STRONG_INLINE Derived& MatrixBase<Derived>::operator=(const MatrixBase& other)
 {
-  return internal::assign_selector<Derived,Derived>::run(derived(), other.derived());
+  internal::call_assignment(derived(), other.derived());
+  return derived();
 }
 
 template<typename Derived>
 template <typename OtherDerived>
+EIGEN_DEVICE_FUNC
 EIGEN_STRONG_INLINE Derived& MatrixBase<Derived>::operator=(const DenseBase<OtherDerived>& other)
 {
-  return internal::assign_selector<Derived,OtherDerived>::run(derived(), other.derived());
+  internal::call_assignment(derived(), other.derived());
+  return derived();
 }
 
 template<typename Derived>
 template <typename OtherDerived>
+EIGEN_DEVICE_FUNC
 EIGEN_STRONG_INLINE Derived& MatrixBase<Derived>::operator=(const EigenBase<OtherDerived>& other)
 {
-  return internal::assign_selector<Derived,OtherDerived,false>::evalTo(derived(), other.derived());
+  internal::call_assignment(derived(), other.derived());
+  return derived();
 }
 
 template<typename Derived>
 template<typename OtherDerived>
+EIGEN_DEVICE_FUNC
 EIGEN_STRONG_INLINE Derived& MatrixBase<Derived>::operator=(const ReturnByValue<OtherDerived>& other)
 {
-  return internal::assign_selector<Derived,OtherDerived,false>::evalTo(derived(), other.derived());
+  other.derived().evalTo(derived());
+  return derived();
 }
 
 } // end namespace Eigen

extern/Eigen3/Eigen/src/Core/AssignEvaluator.h

@@ -0,0 +1,935 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// Copyright (C) 2011 Benoit Jacob <jacob.benoit.1@gmail.com>
+// Copyright (C) 2011-2014 Gael Guennebaud <gael.guennebaud@inria.fr>
+// Copyright (C) 2011-2012 Jitse Niesen <jitse@maths.leeds.ac.uk>
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
+#ifndef EIGEN_ASSIGN_EVALUATOR_H
+#define EIGEN_ASSIGN_EVALUATOR_H
+
+namespace Eigen {
+
+// This implementation is based on Assign.h
+
+namespace internal {
+  
+/***************************************************************************
+* Part 1 : the logic deciding a strategy for traversal and unrolling       *
+***************************************************************************/
+
+// copy_using_evaluator_traits is based on assign_traits
+
+template <typename DstEvaluator, typename SrcEvaluator, typename AssignFunc>
+struct copy_using_evaluator_traits
+{
+  typedef typename DstEvaluator::XprType Dst;
+  typedef typename Dst::Scalar DstScalar;
+  
+  enum {
+    DstFlags = DstEvaluator::Flags,
+    SrcFlags = SrcEvaluator::Flags
+  };
+  
+public:
+  enum {
+    DstAlignment = DstEvaluator::Alignment,
+    SrcAlignment = SrcEvaluator::Alignment,
+    DstHasDirectAccess = (DstFlags & DirectAccessBit) == DirectAccessBit,
+    JointAlignment = EIGEN_PLAIN_ENUM_MIN(DstAlignment,SrcAlignment)
+  };
+
+private:
+  enum {
+    InnerSize = int(Dst::IsVectorAtCompileTime) ? int(Dst::SizeAtCompileTime)
+              : int(DstFlags)&RowMajorBit ? int(Dst::ColsAtCompileTime)
+              : int(Dst::RowsAtCompileTime),
+    InnerMaxSize = int(Dst::IsVectorAtCompileTime) ? int(Dst::MaxSizeAtCompileTime)
+              : int(DstFlags)&RowMajorBit ? int(Dst::MaxColsAtCompileTime)
+              : int(Dst::MaxRowsAtCompileTime),
+    OuterStride = int(outer_stride_at_compile_time<Dst>::ret),
+    MaxSizeAtCompileTime = Dst::SizeAtCompileTime
+  };
+
+  // TODO distinguish between linear traversal and inner-traversals
+  typedef typename find_best_packet<DstScalar,Dst::SizeAtCompileTime>::type LinearPacketType;
+  typedef typename find_best_packet<DstScalar,InnerSize>::type InnerPacketType;
+
+  enum {
+    LinearPacketSize = unpacket_traits<LinearPacketType>::size,
+    InnerPacketSize = unpacket_traits<InnerPacketType>::size
+  };
+
+public:
+  enum {
+    LinearRequiredAlignment = unpacket_traits<LinearPacketType>::alignment,
+    InnerRequiredAlignment = unpacket_traits<InnerPacketType>::alignment
+  };
+
+private:
+  enum {
+    DstIsRowMajor = DstFlags&RowMajorBit,
+    SrcIsRowMajor = SrcFlags&RowMajorBit,
+    StorageOrdersAgree = (int(DstIsRowMajor) == int(SrcIsRowMajor)),
+    MightVectorize = bool(StorageOrdersAgree)
+                  && (int(DstFlags) & int(SrcFlags) & ActualPacketAccessBit)
+                  && bool(functor_traits<AssignFunc>::PacketAccess),
+    MayInnerVectorize  = MightVectorize
+                       && int(InnerSize)!=Dynamic && int(InnerSize)%int(InnerPacketSize)==0
+                       && int(OuterStride)!=Dynamic && int(OuterStride)%int(InnerPacketSize)==0
+                       && (EIGEN_UNALIGNED_VECTORIZE  || int(JointAlignment)>=int(InnerRequiredAlignment)),
+    MayLinearize = bool(StorageOrdersAgree) && (int(DstFlags) & int(SrcFlags) & LinearAccessBit),
+    MayLinearVectorize = bool(MightVectorize) && bool(MayLinearize) && bool(DstHasDirectAccess)
+                       && (EIGEN_UNALIGNED_VECTORIZE || (int(DstAlignment)>=int(LinearRequiredAlignment)) || MaxSizeAtCompileTime == Dynamic),
+      /* If the destination isn't aligned, we have to do runtime checks and we don't unroll,
+         so it's only good for large enough sizes. */
+    MaySliceVectorize  = bool(MightVectorize) && bool(DstHasDirectAccess)
+                       && (int(InnerMaxSize)==Dynamic || int(InnerMaxSize)>=(EIGEN_UNALIGNED_VECTORIZE?InnerPacketSize:(3*InnerPacketSize)))
+      /* slice vectorization can be slow, so we only want it if the slices are big, which is
+         indicated by InnerMaxSize rather than InnerSize, think of the case of a dynamic block
+         in a fixed-size matrix
+         However, with EIGEN_UNALIGNED_VECTORIZE and unrolling, slice vectorization is still worth it */
+  };
+
+public:
+  enum {
+    Traversal = int(MayLinearVectorize) && (LinearPacketSize>InnerPacketSize) ? int(LinearVectorizedTraversal)
+              : int(MayInnerVectorize)   ? int(InnerVectorizedTraversal)
+              : int(MayLinearVectorize)  ? int(LinearVectorizedTraversal)
+              : int(MaySliceVectorize)   ? int(SliceVectorizedTraversal)
+              : int(MayLinearize)        ? int(LinearTraversal)
+                                         : int(DefaultTraversal),
+    Vectorized = int(Traversal) == InnerVectorizedTraversal
+              || int(Traversal) == LinearVectorizedTraversal
+              || int(Traversal) == SliceVectorizedTraversal
+  };
+
+  typedef typename conditional<int(Traversal)==LinearVectorizedTraversal, LinearPacketType, InnerPacketType>::type PacketType;
+
+private:
+  enum {
+    ActualPacketSize    = int(Traversal)==LinearVectorizedTraversal ? LinearPacketSize
+                        : Vectorized ? InnerPacketSize
+                        : 1,
+    UnrollingLimit      = EIGEN_UNROLLING_LIMIT * ActualPacketSize,
+    MayUnrollCompletely = int(Dst::SizeAtCompileTime) != Dynamic
+                       && int(Dst::SizeAtCompileTime) * (int(DstEvaluator::CoeffReadCost)+int(SrcEvaluator::CoeffReadCost)) <= int(UnrollingLimit),
+    MayUnrollInner      = int(InnerSize) != Dynamic
+                       && int(InnerSize) * (int(DstEvaluator::CoeffReadCost)+int(SrcEvaluator::CoeffReadCost)) <= int(UnrollingLimit)
+  };
+
+public:
+  enum {
+    Unrolling = (int(Traversal) == int(InnerVectorizedTraversal) || int(Traversal) == int(DefaultTraversal))
+                ? (
+                    int(MayUnrollCompletely) ? int(CompleteUnrolling)
+                  : int(MayUnrollInner)      ? int(InnerUnrolling)
+                                             : int(NoUnrolling)
+                  )
+              : int(Traversal) == int(LinearVectorizedTraversal)
+                ? ( bool(MayUnrollCompletely) && ( EIGEN_UNALIGNED_VECTORIZE || (int(DstAlignment)>=int(LinearRequiredAlignment)))
+                          ? int(CompleteUnrolling)
+                          : int(NoUnrolling) )
+              : int(Traversal) == int(LinearTraversal)
+                ? ( bool(MayUnrollCompletely) ? int(CompleteUnrolling) 
+                                              : int(NoUnrolling) )
+#if EIGEN_UNALIGNED_VECTORIZE
+              : int(Traversal) == int(SliceVectorizedTraversal)
+                ? ( bool(MayUnrollInner) ? int(InnerUnrolling)
+                                         : int(NoUnrolling) )
+#endif
+              : int(NoUnrolling)
+  };
+
+#ifdef EIGEN_DEBUG_ASSIGN
+  static void debug()
+  {
+    std::cerr << "DstXpr: " << typeid(typename DstEvaluator::XprType).name() << std::endl;
+    std::cerr << "SrcXpr: " << typeid(typename SrcEvaluator::XprType).name() << std::endl;
+    std::cerr.setf(std::ios::hex, std::ios::basefield);
+    std::cerr << "DstFlags" << " = " << DstFlags << " (" << demangle_flags(DstFlags) << " )" << std::endl;
+    std::cerr << "SrcFlags" << " = " << SrcFlags << " (" << demangle_flags(SrcFlags) << " )" << std::endl;
+    std::cerr.unsetf(std::ios::hex);
+    EIGEN_DEBUG_VAR(DstAlignment)
+    EIGEN_DEBUG_VAR(SrcAlignment)
+    EIGEN_DEBUG_VAR(LinearRequiredAlignment)
+    EIGEN_DEBUG_VAR(InnerRequiredAlignment)
+    EIGEN_DEBUG_VAR(JointAlignment)
+    EIGEN_DEBUG_VAR(InnerSize)
+    EIGEN_DEBUG_VAR(InnerMaxSize)
+    EIGEN_DEBUG_VAR(LinearPacketSize)
+    EIGEN_DEBUG_VAR(InnerPacketSize)
+    EIGEN_DEBUG_VAR(ActualPacketSize)
+    EIGEN_DEBUG_VAR(StorageOrdersAgree)
+    EIGEN_DEBUG_VAR(MightVectorize)
+    EIGEN_DEBUG_VAR(MayLinearize)
+    EIGEN_DEBUG_VAR(MayInnerVectorize)
+    EIGEN_DEBUG_VAR(MayLinearVectorize)
+    EIGEN_DEBUG_VAR(MaySliceVectorize)
+    std::cerr << "Traversal" << " = " << Traversal << " (" << demangle_traversal(Traversal) << ")" << std::endl;
+    EIGEN_DEBUG_VAR(SrcEvaluator::CoeffReadCost)
+    EIGEN_DEBUG_VAR(UnrollingLimit)
+    EIGEN_DEBUG_VAR(MayUnrollCompletely)
+    EIGEN_DEBUG_VAR(MayUnrollInner)
+    std::cerr << "Unrolling" << " = " << Unrolling << " (" << demangle_unrolling(Unrolling) << ")" << std::endl;
+    std::cerr << std::endl;
+  }
+#endif
+};
+
+/***************************************************************************
+* Part 2 : meta-unrollers
+***************************************************************************/
+
+/************************
+*** Default traversal ***
+************************/
+
+template<typename Kernel, int Index, int Stop>
+struct copy_using_evaluator_DefaultTraversal_CompleteUnrolling
+{
+  // FIXME: this is not very clean, perhaps this information should be provided by the kernel?
+  typedef typename Kernel::DstEvaluatorType DstEvaluatorType;
+  typedef typename DstEvaluatorType::XprType DstXprType;
+  
+  enum {
+    outer = Index / DstXprType::InnerSizeAtCompileTime,
+    inner = Index % DstXprType::InnerSizeAtCompileTime
+  };
+
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel)
+  {
+    kernel.assignCoeffByOuterInner(outer, inner);
+    copy_using_evaluator_DefaultTraversal_CompleteUnrolling<Kernel, Index+1, Stop>::run(kernel);
+  }
+};
+
+template<typename Kernel, int Stop>
+struct copy_using_evaluator_DefaultTraversal_CompleteUnrolling<Kernel, Stop, Stop>
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel&) { }
+};
+
+template<typename Kernel, int Index_, int Stop>
+struct copy_using_evaluator_DefaultTraversal_InnerUnrolling
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel, Index outer)
+  {
+    kernel.assignCoeffByOuterInner(outer, Index_);
+    copy_using_evaluator_DefaultTraversal_InnerUnrolling<Kernel, Index_+1, Stop>::run(kernel, outer);
+  }
+};
+
+template<typename Kernel, int Stop>
+struct copy_using_evaluator_DefaultTraversal_InnerUnrolling<Kernel, Stop, Stop>
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel&, Index) { }
+};
+
+/***********************
+*** Linear traversal ***
+***********************/
+
+template<typename Kernel, int Index, int Stop>
+struct copy_using_evaluator_LinearTraversal_CompleteUnrolling
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel& kernel)
+  {
+    kernel.assignCoeff(Index);
+    copy_using_evaluator_LinearTraversal_CompleteUnrolling<Kernel, Index+1, Stop>::run(kernel);
+  }
+};
+
+template<typename Kernel, int Stop>
+struct copy_using_evaluator_LinearTraversal_CompleteUnrolling<Kernel, Stop, Stop>
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel&) { }
+};
+
+/**************************
+*** Inner vectorization ***
+**************************/
+
+template<typename Kernel, int Index, int Stop>
+struct copy_using_evaluator_innervec_CompleteUnrolling
+{
+  // FIXME: this is not very clean, perhaps this information should be provided by the kernel?
+  typedef typename Kernel::DstEvaluatorType DstEvaluatorType;
+  typedef typename DstEvaluatorType::XprType DstXprType;
+  typedef typename Kernel::PacketType PacketType;
+  
+  enum {
+    outer = Index / DstXprType::InnerSizeAtCompileTime,
+    inner = Index % DstXprType::InnerSizeAtCompileTime,
+    SrcAlignment = Kernel::AssignmentTraits::SrcAlignment,
+    DstAlignment = Kernel::AssignmentTraits::DstAlignment
+  };
+
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel)
+  {
+    kernel.template assignPacketByOuterInner<DstAlignment, SrcAlignment, PacketType>(outer, inner);
+    enum { NextIndex = Index + unpacket_traits<PacketType>::size };
+    copy_using_evaluator_innervec_CompleteUnrolling<Kernel, NextIndex, Stop>::run(kernel);
+  }
+};
+
+template<typename Kernel, int Stop>
+struct copy_using_evaluator_innervec_CompleteUnrolling<Kernel, Stop, Stop>
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel&) { }
+};
+
+template<typename Kernel, int Index_, int Stop, int SrcAlignment, int DstAlignment>
+struct copy_using_evaluator_innervec_InnerUnrolling
+{
+  typedef typename Kernel::PacketType PacketType;
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel, Index outer)
+  {
+    kernel.template assignPacketByOuterInner<DstAlignment, SrcAlignment, PacketType>(outer, Index_);
+    enum { NextIndex = Index_ + unpacket_traits<PacketType>::size };
+    copy_using_evaluator_innervec_InnerUnrolling<Kernel, NextIndex, Stop, SrcAlignment, DstAlignment>::run(kernel, outer);
+  }
+};
+
+template<typename Kernel, int Stop, int SrcAlignment, int DstAlignment>
+struct copy_using_evaluator_innervec_InnerUnrolling<Kernel, Stop, Stop, SrcAlignment, DstAlignment>
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &, Index) { }
+};
+
+/***************************************************************************
+* Part 3 : implementation of all cases
+***************************************************************************/
+
+// dense_assignment_loop is based on assign_impl
+
+template<typename Kernel,
+         int Traversal = Kernel::AssignmentTraits::Traversal,
+         int Unrolling = Kernel::AssignmentTraits::Unrolling>
+struct dense_assignment_loop;
+
+/************************
+*** Default traversal ***
+************************/
+
+template<typename Kernel>
+struct dense_assignment_loop<Kernel, DefaultTraversal, NoUnrolling>
+{
+  EIGEN_DEVICE_FUNC static void EIGEN_STRONG_INLINE run(Kernel &kernel)
+  {
+    for(Index outer = 0; outer < kernel.outerSize(); ++outer) {
+      for(Index inner = 0; inner < kernel.innerSize(); ++inner) {
+        kernel.assignCoeffByOuterInner(outer, inner);
+      }
+    }
+  }
+};
+
+template<typename Kernel>
+struct dense_assignment_loop<Kernel, DefaultTraversal, CompleteUnrolling>
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel)
+  {
+    typedef typename Kernel::DstEvaluatorType::XprType DstXprType;
+    copy_using_evaluator_DefaultTraversal_CompleteUnrolling<Kernel, 0, DstXprType::SizeAtCompileTime>::run(kernel);
+  }
+};
+
+template<typename Kernel>
+struct dense_assignment_loop<Kernel, DefaultTraversal, InnerUnrolling>
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel)
+  {
+    typedef typename Kernel::DstEvaluatorType::XprType DstXprType;
+
+    const Index outerSize = kernel.outerSize();
+    for(Index outer = 0; outer < outerSize; ++outer)
+      copy_using_evaluator_DefaultTraversal_InnerUnrolling<Kernel, 0, DstXprType::InnerSizeAtCompileTime>::run(kernel, outer);
+  }
+};
+
+/***************************
+*** Linear vectorization ***
+***************************/
+
+
+// The goal of unaligned_dense_assignment_loop is simply to factorize the handling
+// of the non vectorizable beginning and ending parts
+
+template <bool IsAligned = false>
+struct unaligned_dense_assignment_loop
+{
+  // if IsAligned = true, then do nothing
+  template <typename Kernel>
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel&, Index, Index) {}
+};
+
+template <>
+struct unaligned_dense_assignment_loop<false>
+{
+  // MSVC must not inline this functions. If it does, it fails to optimize the
+  // packet access path.
+  // FIXME check which version exhibits this issue
+#if EIGEN_COMP_MSVC
+  template <typename Kernel>
+  static EIGEN_DONT_INLINE void run(Kernel &kernel,
+                                    Index start,
+                                    Index end)
+#else
+  template <typename Kernel>
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel,
+                                      Index start,
+                                      Index end)
+#endif
+  {
+    for (Index index = start; index < end; ++index)
+      kernel.assignCoeff(index);
+  }
+};
+
+template<typename Kernel>
+struct dense_assignment_loop<Kernel, LinearVectorizedTraversal, NoUnrolling>
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel)
+  {
+    const Index size = kernel.size();
+    typedef typename Kernel::Scalar Scalar;
+    typedef typename Kernel::PacketType PacketType;
+    enum {
+      requestedAlignment = Kernel::AssignmentTraits::LinearRequiredAlignment,
+      packetSize = unpacket_traits<PacketType>::size,
+      dstIsAligned = int(Kernel::AssignmentTraits::DstAlignment)>=int(requestedAlignment),
+      dstAlignment = packet_traits<Scalar>::AlignedOnScalar ? int(requestedAlignment)
+                                                            : int(Kernel::AssignmentTraits::DstAlignment),
+      srcAlignment = Kernel::AssignmentTraits::JointAlignment
+    };
+    const Index alignedStart = dstIsAligned ? 0 : internal::first_aligned<requestedAlignment>(kernel.dstDataPtr(), size);
+    const Index alignedEnd = alignedStart + ((size-alignedStart)/packetSize)*packetSize;
+
+    unaligned_dense_assignment_loop<dstIsAligned!=0>::run(kernel, 0, alignedStart);
+
+    for(Index index = alignedStart; index < alignedEnd; index += packetSize)
+      kernel.template assignPacket<dstAlignment, srcAlignment, PacketType>(index);
+
+    unaligned_dense_assignment_loop<>::run(kernel, alignedEnd, size);
+  }
+};
+
+template<typename Kernel>
+struct dense_assignment_loop<Kernel, LinearVectorizedTraversal, CompleteUnrolling>
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel)
+  {
+    typedef typename Kernel::DstEvaluatorType::XprType DstXprType;
+    typedef typename Kernel::PacketType PacketType;
+    
+    enum { size = DstXprType::SizeAtCompileTime,
+           packetSize =unpacket_traits<PacketType>::size,
+           alignedSize = (size/packetSize)*packetSize };
+
+    copy_using_evaluator_innervec_CompleteUnrolling<Kernel, 0, alignedSize>::run(kernel);
+    copy_using_evaluator_DefaultTraversal_CompleteUnrolling<Kernel, alignedSize, size>::run(kernel);
+  }
+};
+
+/**************************
+*** Inner vectorization ***
+**************************/
+
+template<typename Kernel>
+struct dense_assignment_loop<Kernel, InnerVectorizedTraversal, NoUnrolling>
+{
+  typedef typename Kernel::PacketType PacketType;
+  enum {
+    SrcAlignment = Kernel::AssignmentTraits::SrcAlignment,
+    DstAlignment = Kernel::AssignmentTraits::DstAlignment
+  };
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel)
+  {
+    const Index innerSize = kernel.innerSize();
+    const Index outerSize = kernel.outerSize();
+    const Index packetSize = unpacket_traits<PacketType>::size;
+    for(Index outer = 0; outer < outerSize; ++outer)
+      for(Index inner = 0; inner < innerSize; inner+=packetSize)
+        kernel.template assignPacketByOuterInner<DstAlignment, SrcAlignment, PacketType>(outer, inner);
+  }
+};
+
+template<typename Kernel>
+struct dense_assignment_loop<Kernel, InnerVectorizedTraversal, CompleteUnrolling>
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel)
+  {
+    typedef typename Kernel::DstEvaluatorType::XprType DstXprType;
+    copy_using_evaluator_innervec_CompleteUnrolling<Kernel, 0, DstXprType::SizeAtCompileTime>::run(kernel);
+  }
+};
+
+template<typename Kernel>
+struct dense_assignment_loop<Kernel, InnerVectorizedTraversal, InnerUnrolling>
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel)
+  {
+    typedef typename Kernel::DstEvaluatorType::XprType DstXprType;
+    typedef typename Kernel::AssignmentTraits Traits;
+    const Index outerSize = kernel.outerSize();
+    for(Index outer = 0; outer < outerSize; ++outer)
+      copy_using_evaluator_innervec_InnerUnrolling<Kernel, 0, DstXprType::InnerSizeAtCompileTime,
+                                                   Traits::SrcAlignment, Traits::DstAlignment>::run(kernel, outer);
+  }
+};
+
+/***********************
+*** Linear traversal ***
+***********************/
+
+template<typename Kernel>
+struct dense_assignment_loop<Kernel, LinearTraversal, NoUnrolling>
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel)
+  {
+    const Index size = kernel.size();
+    for(Index i = 0; i < size; ++i)
+      kernel.assignCoeff(i);
+  }
+};
+
+template<typename Kernel>
+struct dense_assignment_loop<Kernel, LinearTraversal, CompleteUnrolling>
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel)
+  {
+    typedef typename Kernel::DstEvaluatorType::XprType DstXprType;
+    copy_using_evaluator_LinearTraversal_CompleteUnrolling<Kernel, 0, DstXprType::SizeAtCompileTime>::run(kernel);
+  }
+};
+
+/**************************
+*** Slice vectorization ***
+***************************/
+
+template<typename Kernel>
+struct dense_assignment_loop<Kernel, SliceVectorizedTraversal, NoUnrolling>
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel)
+  {
+    typedef typename Kernel::Scalar Scalar;
+    typedef typename Kernel::PacketType PacketType;
+    enum {
+      packetSize = unpacket_traits<PacketType>::size,
+      requestedAlignment = int(Kernel::AssignmentTraits::InnerRequiredAlignment),
+      alignable = packet_traits<Scalar>::AlignedOnScalar || int(Kernel::AssignmentTraits::DstAlignment)>=sizeof(Scalar),
+      dstIsAligned = int(Kernel::AssignmentTraits::DstAlignment)>=int(requestedAlignment),
+      dstAlignment = alignable ? int(requestedAlignment)
+                               : int(Kernel::AssignmentTraits::DstAlignment)
+    };
+    const Scalar *dst_ptr = kernel.dstDataPtr();
+    if((!bool(dstIsAligned)) && (UIntPtr(dst_ptr) % sizeof(Scalar))>0)
+    {
+      // the pointer is not aligend-on scalar, so alignment is not possible
+      return dense_assignment_loop<Kernel,DefaultTraversal,NoUnrolling>::run(kernel);
+    }
+    const Index packetAlignedMask = packetSize - 1;
+    const Index innerSize = kernel.innerSize();
+    const Index outerSize = kernel.outerSize();
+    const Index alignedStep = alignable ? (packetSize - kernel.outerStride() % packetSize) & packetAlignedMask : 0;
+    Index alignedStart = ((!alignable) || bool(dstIsAligned)) ? 0 : internal::first_aligned<requestedAlignment>(dst_ptr, innerSize);
+
+    for(Index outer = 0; outer < outerSize; ++outer)
+    {
+      const Index alignedEnd = alignedStart + ((innerSize-alignedStart) & ~packetAlignedMask);
+      // do the non-vectorizable part of the assignment
+      for(Index inner = 0; inner<alignedStart ; ++inner)
+        kernel.assignCoeffByOuterInner(outer, inner);
+
+      // do the vectorizable part of the assignment
+      for(Index inner = alignedStart; inner<alignedEnd; inner+=packetSize)
+        kernel.template assignPacketByOuterInner<dstAlignment, Unaligned, PacketType>(outer, inner);
+
+      // do the non-vectorizable part of the assignment
+      for(Index inner = alignedEnd; inner<innerSize ; ++inner)
+        kernel.assignCoeffByOuterInner(outer, inner);
+
+      alignedStart = numext::mini((alignedStart+alignedStep)%packetSize, innerSize);
+    }
+  }
+};
+
+#if EIGEN_UNALIGNED_VECTORIZE
+template<typename Kernel>
+struct dense_assignment_loop<Kernel, SliceVectorizedTraversal, InnerUnrolling>
+{
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE void run(Kernel &kernel)
+  {
+    typedef typename Kernel::DstEvaluatorType::XprType DstXprType;
+    typedef typename Kernel::PacketType PacketType;
+
+    enum { size = DstXprType::InnerSizeAtCompileTime,
+           packetSize =unpacket_traits<PacketType>::size,
+           vectorizableSize = (size/packetSize)*packetSize };
+
+    for(Index outer = 0; outer < kernel.outerSize(); ++outer)
+    {
+      copy_using_evaluator_innervec_InnerUnrolling<Kernel, 0, vectorizableSize, 0, 0>::run(kernel, outer);
+      copy_using_evaluator_DefaultTraversal_InnerUnrolling<Kernel, vectorizableSize, size>::run(kernel, outer);
+    }
+  }
+};
+#endif
+
+
+/***************************************************************************
+* Part 4 : Generic dense assignment kernel
+***************************************************************************/
+
+// This class generalize the assignment of a coefficient (or packet) from one dense evaluator
+// to another dense writable evaluator.
+// It is parametrized by the two evaluators, and the actual assignment functor.
+// This abstraction level permits to keep the evaluation loops as simple and as generic as possible.
+// One can customize the assignment using this generic dense_assignment_kernel with different
+// functors, or by completely overloading it, by-passing a functor.
+template<typename DstEvaluatorTypeT, typename SrcEvaluatorTypeT, typename Functor, int Version = Specialized>
+class generic_dense_assignment_kernel
+{
+protected:
+  typedef typename DstEvaluatorTypeT::XprType DstXprType;
+  typedef typename SrcEvaluatorTypeT::XprType SrcXprType;
+public:
+  
+  typedef DstEvaluatorTypeT DstEvaluatorType;
+  typedef SrcEvaluatorTypeT SrcEvaluatorType;
+  typedef typename DstEvaluatorType::Scalar Scalar;
+  typedef copy_using_evaluator_traits<DstEvaluatorTypeT, SrcEvaluatorTypeT, Functor> AssignmentTraits;
+  typedef typename AssignmentTraits::PacketType PacketType;
+  
+  
+  EIGEN_DEVICE_FUNC generic_dense_assignment_kernel(DstEvaluatorType &dst, const SrcEvaluatorType &src, const Functor &func, DstXprType& dstExpr)
+    : m_dst(dst), m_src(src), m_functor(func), m_dstExpr(dstExpr)
+  {
+    #ifdef EIGEN_DEBUG_ASSIGN
+    AssignmentTraits::debug();
+    #endif
+  }
+  
+  EIGEN_DEVICE_FUNC Index size() const        { return m_dstExpr.size(); }
+  EIGEN_DEVICE_FUNC Index innerSize() const   { return m_dstExpr.innerSize(); }
+  EIGEN_DEVICE_FUNC Index outerSize() const   { return m_dstExpr.outerSize(); }
+  EIGEN_DEVICE_FUNC Index rows() const        { return m_dstExpr.rows(); }
+  EIGEN_DEVICE_FUNC Index cols() const        { return m_dstExpr.cols(); }
+  EIGEN_DEVICE_FUNC Index outerStride() const { return m_dstExpr.outerStride(); }
+  
+  EIGEN_DEVICE_FUNC DstEvaluatorType& dstEvaluator() { return m_dst; }
+  EIGEN_DEVICE_FUNC const SrcEvaluatorType& srcEvaluator() const { return m_src; }
+  
+  /// Assign src(row,col) to dst(row,col) through the assignment functor.
+  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void assignCoeff(Index row, Index col)
+  {
+    m_functor.assignCoeff(m_dst.coeffRef(row,col), m_src.coeff(row,col));
+  }
+  
+  /// \sa assignCoeff(Index,Index)
+  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void assignCoeff(Index index)
+  {
+    m_functor.assignCoeff(m_dst.coeffRef(index), m_src.coeff(index));
+  }
+  
+  /// \sa assignCoeff(Index,Index)
+  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void assignCoeffByOuterInner(Index outer, Index inner)
+  {
+    Index row = rowIndexByOuterInner(outer, inner); 
+    Index col = colIndexByOuterInner(outer, inner); 
+    assignCoeff(row, col);
+  }
+  
+  
+  template<int StoreMode, int LoadMode, typename PacketType>
+  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void assignPacket(Index row, Index col)
+  {
+    m_functor.template assignPacket<StoreMode>(&m_dst.coeffRef(row,col), m_src.template packet<LoadMode,PacketType>(row,col));
+  }
+  
+  template<int StoreMode, int LoadMode, typename PacketType>
+  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void assignPacket(Index index)
+  {
+    m_functor.template assignPacket<StoreMode>(&m_dst.coeffRef(index), m_src.template packet<LoadMode,PacketType>(index));
+  }
+  
+  template<int StoreMode, int LoadMode, typename PacketType>
+  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void assignPacketByOuterInner(Index outer, Index inner)
+  {
+    Index row = rowIndexByOuterInner(outer, inner); 
+    Index col = colIndexByOuterInner(outer, inner);
+    assignPacket<StoreMode,LoadMode,PacketType>(row, col);
+  }
+  
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE Index rowIndexByOuterInner(Index outer, Index inner)
+  {
+    typedef typename DstEvaluatorType::ExpressionTraits Traits;
+    return int(Traits::RowsAtCompileTime) == 1 ? 0
+      : int(Traits::ColsAtCompileTime) == 1 ? inner
+      : int(DstEvaluatorType::Flags)&RowMajorBit ? outer
+      : inner;
+  }
+
+  EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE Index colIndexByOuterInner(Index outer, Index inner)
+  {
+    typedef typename DstEvaluatorType::ExpressionTraits Traits;
+    return int(Traits::ColsAtCompileTime) == 1 ? 0
+      : int(Traits::RowsAtCompileTime) == 1 ? inner
+      : int(DstEvaluatorType::Flags)&RowMajorBit ? inner
+      : outer;
+  }
+
+  EIGEN_DEVICE_FUNC const Scalar* dstDataPtr() const
+  {
+    return m_dstExpr.data();
+  }
+  
+protected:
+  DstEvaluatorType& m_dst;
+  const SrcEvaluatorType& m_src;
+  const Functor &m_functor;
+  // TODO find a way to avoid the needs of the original expression
+  DstXprType& m_dstExpr;
+};
+
+/***************************************************************************
+* Part 5 : Entry point for dense rectangular assignment
+***************************************************************************/
+
+template<typename DstXprType,typename SrcXprType, typename Functor>
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+void resize_if_allowed(DstXprType &dst, const SrcXprType& src, const Functor &/*func*/)
+{
+  EIGEN_ONLY_USED_FOR_DEBUG(dst);
+  EIGEN_ONLY_USED_FOR_DEBUG(src);
+  eigen_assert(dst.rows() == src.rows() && dst.cols() == src.cols());
+}
+
+template<typename DstXprType,typename SrcXprType, typename T1, typename T2>
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+void resize_if_allowed(DstXprType &dst, const SrcXprType& src, const internal::assign_op<T1,T2> &/*func*/)
+{
+  Index dstRows = src.rows();
+  Index dstCols = src.cols();
+  if(((dst.rows()!=dstRows) || (dst.cols()!=dstCols)))
+    dst.resize(dstRows, dstCols);
+  eigen_assert(dst.rows() == dstRows && dst.cols() == dstCols);
+}
+
+template<typename DstXprType, typename SrcXprType, typename Functor>
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void call_dense_assignment_loop(DstXprType& dst, const SrcXprType& src, const Functor &func)
+{
+  typedef evaluator<DstXprType> DstEvaluatorType;
+  typedef evaluator<SrcXprType> SrcEvaluatorType;
+
+  SrcEvaluatorType srcEvaluator(src);
+
+  // NOTE To properly handle A = (A*A.transpose())/s with A rectangular,
+  // we need to resize the destination after the source evaluator has been created.
+  resize_if_allowed(dst, src, func);
+
+  DstEvaluatorType dstEvaluator(dst);
+    
+  typedef generic_dense_assignment_kernel<DstEvaluatorType,SrcEvaluatorType,Functor> Kernel;
+  Kernel kernel(dstEvaluator, srcEvaluator, func, dst.const_cast_derived());
+
+  dense_assignment_loop<Kernel>::run(kernel);
+}
+
+template<typename DstXprType, typename SrcXprType>
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void call_dense_assignment_loop(DstXprType& dst, const SrcXprType& src)
+{
+  call_dense_assignment_loop(dst, src, internal::assign_op<typename DstXprType::Scalar,typename SrcXprType::Scalar>());
+}
+
+/***************************************************************************
+* Part 6 : Generic assignment
+***************************************************************************/
+
+// Based on the respective shapes of the destination and source,
+// the class AssignmentKind determine the kind of assignment mechanism.
+// AssignmentKind must define a Kind typedef.
+template<typename DstShape, typename SrcShape> struct AssignmentKind;
+
+// Assignement kind defined in this file:
+struct Dense2Dense {};
+struct EigenBase2EigenBase {};
+
+template<typename,typename> struct AssignmentKind { typedef EigenBase2EigenBase Kind; };
+template<> struct AssignmentKind<DenseShape,DenseShape> { typedef Dense2Dense Kind; };
+    
+// This is the main assignment class
+template< typename DstXprType, typename SrcXprType, typename Functor,
+          typename Kind = typename AssignmentKind< typename evaluator_traits<DstXprType>::Shape , typename evaluator_traits<SrcXprType>::Shape >::Kind,
+          typename EnableIf = void>
+struct Assignment;
+
+
+// The only purpose of this call_assignment() function is to deal with noalias() / "assume-aliasing" and automatic transposition.
+// Indeed, I (Gael) think that this concept of "assume-aliasing" was a mistake, and it makes thing quite complicated.
+// So this intermediate function removes everything related to "assume-aliasing" such that Assignment
+// does not has to bother about these annoying details.
+
+template<typename Dst, typename Src>
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+void call_assignment(Dst& dst, const Src& src)
+{
+  call_assignment(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
+}
+template<typename Dst, typename Src>
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+void call_assignment(const Dst& dst, const Src& src)
+{
+  call_assignment(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
+}
+                     
+// Deal with "assume-aliasing"
+template<typename Dst, typename Src, typename Func>
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+void call_assignment(Dst& dst, const Src& src, const Func& func, typename enable_if< evaluator_assume_aliasing<Src>::value, void*>::type = 0)
+{
+  typename plain_matrix_type<Src>::type tmp(src);
+  call_assignment_no_alias(dst, tmp, func);
+}
+
+template<typename Dst, typename Src, typename Func>
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+void call_assignment(Dst& dst, const Src& src, const Func& func, typename enable_if<!evaluator_assume_aliasing<Src>::value, void*>::type = 0)
+{
+  call_assignment_no_alias(dst, src, func);
+}
+
+// by-pass "assume-aliasing"
+// When there is no aliasing, we require that 'dst' has been properly resized
+template<typename Dst, template <typename> class StorageBase, typename Src, typename Func>
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+void call_assignment(NoAlias<Dst,StorageBase>& dst, const Src& src, const Func& func)
+{
+  call_assignment_no_alias(dst.expression(), src, func);
+}
+
+
+template<typename Dst, typename Src, typename Func>
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+void call_assignment_no_alias(Dst& dst, const Src& src, const Func& func)
+{
+  enum {
+    NeedToTranspose = (    (int(Dst::RowsAtCompileTime) == 1 && int(Src::ColsAtCompileTime) == 1)
+                        || (int(Dst::ColsAtCompileTime) == 1 && int(Src::RowsAtCompileTime) == 1)
+                      ) && int(Dst::SizeAtCompileTime) != 1
+  };
+
+  typedef typename internal::conditional<NeedToTranspose, Transpose<Dst>, Dst>::type ActualDstTypeCleaned;
+  typedef typename internal::conditional<NeedToTranspose, Transpose<Dst>, Dst&>::type ActualDstType;
+  ActualDstType actualDst(dst);
+  
+  // TODO check whether this is the right place to perform these checks:
+  EIGEN_STATIC_ASSERT_LVALUE(Dst)
+  EIGEN_STATIC_ASSERT_SAME_MATRIX_SIZE(ActualDstTypeCleaned,Src)
+  EIGEN_CHECK_BINARY_COMPATIBILIY(Func,typename ActualDstTypeCleaned::Scalar,typename Src::Scalar);
+  
+  Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
+}
+template<typename Dst, typename Src>
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+void call_assignment_no_alias(Dst& dst, const Src& src)
+{
+  call_assignment_no_alias(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
+}
+
+template<typename Dst, typename Src, typename Func>
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+void call_assignment_no_alias_no_transpose(Dst& dst, const Src& src, const Func& func)
+{
+  // TODO check whether this is the right place to perform these checks:
+  EIGEN_STATIC_ASSERT_LVALUE(Dst)
+  EIGEN_STATIC_ASSERT_SAME_MATRIX_SIZE(Dst,Src)
+  EIGEN_CHECK_BINARY_COMPATIBILIY(Func,typename Dst::Scalar,typename Src::Scalar);
+
+  Assignment<Dst,Src,Func>::run(dst, src, func);
+}
+template<typename Dst, typename Src>
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+void call_assignment_no_alias_no_transpose(Dst& dst, const Src& src)
+{
+  call_assignment_no_alias_no_transpose(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
+}
+
+// forward declaration
+template<typename Dst, typename Src> void check_for_aliasing(const Dst &dst, const Src &src);
+
+// Generic Dense to Dense assignment
+// Note that the last template argument "Weak" is needed to make it possible to perform
+// both partial specialization+SFINAE without ambiguous specialization
+template< typename DstXprType, typename SrcXprType, typename Functor, typename Weak>
+struct Assignment<DstXprType, SrcXprType, Functor, Dense2Dense, Weak>
+{
+  EIGEN_DEVICE_FUNC
+  static EIGEN_STRONG_INLINE void run(DstXprType &dst, const SrcXprType &src, const Functor &func)
+  {
+#ifndef EIGEN_NO_DEBUG
+    internal::check_for_aliasing(dst, src);
+#endif
+    
+    call_dense_assignment_loop(dst, src, func);
+  }
+};
+
+// Generic assignment through evalTo.
+// TODO: not sure we have to keep that one, but it helps porting current code to new evaluator mechanism.
+// Note that the last template argument "Weak" is needed to make it possible to perform
+// both partial specialization+SFINAE without ambiguous specialization
+template< typename DstXprType, typename SrcXprType, typename Functor, typename Weak>
+struct Assignment<DstXprType, SrcXprType, Functor, EigenBase2EigenBase, Weak>
+{
+  EIGEN_DEVICE_FUNC
+  static EIGEN_STRONG_INLINE void run(DstXprType &dst, const SrcXprType &src, const internal::assign_op<typename DstXprType::Scalar,typename SrcXprType::Scalar> &/*func*/)
+  {
+    Index dstRows = src.rows();
+    Index dstCols = src.cols();
+    if((dst.rows()!=dstRows) || (dst.cols()!=dstCols))
+      dst.resize(dstRows, dstCols);
+
+    eigen_assert(dst.rows() == src.rows() && dst.cols() == src.cols());
+    src.evalTo(dst);
+  }
+
+  // NOTE The following two functions are templated to avoid their instanciation if not needed
+  //      This is needed because some expressions supports evalTo only and/or have 'void' as scalar type.
+  template<typename SrcScalarType>
+  EIGEN_DEVICE_FUNC
+  static EIGEN_STRONG_INLINE void run(DstXprType &dst, const SrcXprType &src, const internal::add_assign_op<typename DstXprType::Scalar,SrcScalarType> &/*func*/)
+  {
+    Index dstRows = src.rows();
+    Index dstCols = src.cols();
+    if((dst.rows()!=dstRows) || (dst.cols()!=dstCols))
+      dst.resize(dstRows, dstCols);
+
+    eigen_assert(dst.rows() == src.rows() && dst.cols() == src.cols());
+    src.addTo(dst);
+  }
+
+  template<typename SrcScalarType>
+  EIGEN_DEVICE_FUNC
+  static EIGEN_STRONG_INLINE void run(DstXprType &dst, const SrcXprType &src, const internal::sub_assign_op<typename DstXprType::Scalar,SrcScalarType> &/*func*/)
+  {
+    Index dstRows = src.rows();
+    Index dstCols = src.cols();
+    if((dst.rows()!=dstRows) || (dst.cols()!=dstCols))
+      dst.resize(dstRows, dstCols);
+
+    eigen_assert(dst.rows() == src.rows() && dst.cols() == src.cols());
+    src.subTo(dst);
+  }
+};
+
+} // namespace internal
+
+} // end namespace Eigen
+
+#endif // EIGEN_ASSIGN_EVALUATOR_H

extern/Eigen3/Eigen/src/Core/Assign_MKL.h

@@ -1,6 +1,7 @@
 /*
  Copyright (c) 2011, Intel Corporation. All rights reserved.
-
+ Copyright (C) 2015 Gael Guennebaud <gael.guennebaud@inria.fr>
+ 
  Redistribution and use in source and binary forms, with or without modification,
  are permitted provided that the following conditions are met:
 
@@ -37,17 +38,13 @@ namespace Eigen {
 
 namespace internal {
 
-template<typename Op> struct vml_call
-{ enum { IsSupported = 0 }; };
-
-template<typename Dst, typename Src, typename UnaryOp>
+template<typename Dst, typename Src>
 class vml_assign_traits
 {
   private:
     enum {
       DstHasDirectAccess = Dst::Flags & DirectAccessBit,
       SrcHasDirectAccess = Src::Flags & DirectAccessBit,
-
       StorageOrdersAgree = (int(Dst::IsRowMajor) == int(Src::IsRowMajor)),
       InnerSize = int(Dst::IsVectorAtCompileTime) ? int(Dst::SizeAtCompileTime)
                 : int(Dst::Flags)&RowMajorBit ? int(Dst::ColsAtCompileTime)
@@ -57,165 +54,122 @@ class vml_assign_traits
                     : int(Dst::MaxRowsAtCompileTime),
       MaxSizeAtCompileTime = Dst::SizeAtCompileTime,
 
-      MightEnableVml =  vml_call<UnaryOp>::IsSupported && StorageOrdersAgree && DstHasDirectAccess && SrcHasDirectAccess
-                     && Src::InnerStrideAtCompileTime==1 && Dst::InnerStrideAtCompileTime==1,
+      MightEnableVml = StorageOrdersAgree && DstHasDirectAccess && SrcHasDirectAccess && Src::InnerStrideAtCompileTime==1 && Dst::InnerStrideAtCompileTime==1,
       MightLinearize = MightEnableVml && (int(Dst::Flags) & int(Src::Flags) & LinearAccessBit),
       VmlSize = MightLinearize ? MaxSizeAtCompileTime : InnerMaxSize,
-      LargeEnough = VmlSize==Dynamic || VmlSize>=EIGEN_MKL_VML_THRESHOLD,
-      MayEnableVml = MightEnableVml && LargeEnough,
-      MayLinearize = MayEnableVml && MightLinearize
+      LargeEnough = VmlSize==Dynamic || VmlSize>=EIGEN_MKL_VML_THRESHOLD
     };
   public:
     enum {
-      Traversal = MayLinearize ? LinearVectorizedTraversal
-                : MayEnableVml ? InnerVectorizedTraversal
-                : DefaultTraversal
+      EnableVml = MightEnableVml && LargeEnough,
+      Traversal = MightLinearize ? LinearTraversal : DefaultTraversal
     };
 };
 
-template<typename Derived1, typename Derived2, typename UnaryOp, int Traversal, int Unrolling,
-         int VmlTraversal = vml_assign_traits<Derived1, Derived2, UnaryOp>::Traversal >
-struct vml_assign_impl
-  : assign_impl<Derived1, Eigen::CwiseUnaryOp<UnaryOp, Derived2>,Traversal,Unrolling,BuiltIn>
-{
-};
-
-template<typename Derived1, typename Derived2, typename UnaryOp, int Traversal, int Unrolling>
-struct vml_assign_impl<Derived1, Derived2, UnaryOp, Traversal, Unrolling, InnerVectorizedTraversal>
-{
-  typedef typename Derived1::Scalar Scalar;
-  typedef typename Derived1::Index Index;
-  static inline void run(Derived1& dst, const CwiseUnaryOp<UnaryOp, Derived2>& src)
-  {
-    // in case we want to (or have to) skip VML at runtime we can call:
-    // assign_impl<Derived1,Eigen::CwiseUnaryOp<UnaryOp, Derived2>,Traversal,Unrolling,BuiltIn>::run(dst,src);
-    const Index innerSize = dst.innerSize();
-    const Index outerSize = dst.outerSize();
-    for(Index outer = 0; outer < outerSize; ++outer) {
-      const Scalar *src_ptr = src.IsRowMajor ?  &(src.nestedExpression().coeffRef(outer,0)) :
-                                                &(src.nestedExpression().coeffRef(0, outer));
-      Scalar *dst_ptr = dst.IsRowMajor ? &(dst.coeffRef(outer,0)) : &(dst.coeffRef(0, outer));
-      vml_call<UnaryOp>::run(src.functor(), innerSize, src_ptr, dst_ptr );
-    }
-  }
-};
-
-template<typename Derived1, typename Derived2, typename UnaryOp, int Traversal, int Unrolling>
-struct vml_assign_impl<Derived1, Derived2, UnaryOp, Traversal, Unrolling, LinearVectorizedTraversal>
-{
-  static inline void run(Derived1& dst, const CwiseUnaryOp<UnaryOp, Derived2>& src)
-  {
-    // in case we want to (or have to) skip VML at runtime we can call:
-    // assign_impl<Derived1,Eigen::CwiseUnaryOp<UnaryOp, Derived2>,Traversal,Unrolling,BuiltIn>::run(dst,src);
-    vml_call<UnaryOp>::run(src.functor(), dst.size(), src.nestedExpression().data(), dst.data() );
-  }
-};
-
-// Macroses
-
-#define EIGEN_MKL_VML_SPECIALIZE_ASSIGN(TRAVERSAL,UNROLLING) \
-  template<typename Derived1, typename Derived2, typename UnaryOp> \
-  struct assign_impl<Derived1, Eigen::CwiseUnaryOp<UnaryOp, Derived2>, TRAVERSAL, UNROLLING, Specialized>  {  \
-    static inline void run(Derived1 &dst, const Eigen::CwiseUnaryOp<UnaryOp, Derived2> &src) { \
-      vml_assign_impl<Derived1,Derived2,UnaryOp,TRAVERSAL,UNROLLING>::run(dst, src); \
-    } \
-  };
-
-EIGEN_MKL_VML_SPECIALIZE_ASSIGN(DefaultTraversal,NoUnrolling)
-EIGEN_MKL_VML_SPECIALIZE_ASSIGN(DefaultTraversal,CompleteUnrolling)
-EIGEN_MKL_VML_SPECIALIZE_ASSIGN(DefaultTraversal,InnerUnrolling)
-EIGEN_MKL_VML_SPECIALIZE_ASSIGN(LinearTraversal,NoUnrolling)
-EIGEN_MKL_VML_SPECIALIZE_ASSIGN(LinearTraversal,CompleteUnrolling)
-EIGEN_MKL_VML_SPECIALIZE_ASSIGN(InnerVectorizedTraversal,NoUnrolling)
-EIGEN_MKL_VML_SPECIALIZE_ASSIGN(InnerVectorizedTraversal,CompleteUnrolling)
-EIGEN_MKL_VML_SPECIALIZE_ASSIGN(InnerVectorizedTraversal,InnerUnrolling)
-EIGEN_MKL_VML_SPECIALIZE_ASSIGN(LinearVectorizedTraversal,CompleteUnrolling)
-EIGEN_MKL_VML_SPECIALIZE_ASSIGN(LinearVectorizedTraversal,NoUnrolling)
-EIGEN_MKL_VML_SPECIALIZE_ASSIGN(SliceVectorizedTraversal,NoUnrolling)
-
-
+#define EIGEN_PP_EXPAND(ARG) ARG
 #if !defined (EIGEN_FAST_MATH) || (EIGEN_FAST_MATH != 1)
-#define  EIGEN_MKL_VML_MODE VML_HA
+#define EIGEN_VMLMODE_EXPAND_LA , VML_HA
 #else
-#define  EIGEN_MKL_VML_MODE VML_LA
+#define EIGEN_VMLMODE_EXPAND_LA , VML_LA
 #endif
 
-#define EIGEN_MKL_VML_DECLARE_UNARY_CALL(EIGENOP, VMLOP, EIGENTYPE, VMLTYPE)     \
-  template<> struct vml_call< scalar_##EIGENOP##_op<EIGENTYPE> > {               \
-    enum { IsSupported = 1 };                                                    \
-    static inline void run( const scalar_##EIGENOP##_op<EIGENTYPE>& /*func*/,        \
-                            int size, const EIGENTYPE* src, EIGENTYPE* dst) {    \
-      VMLOP(size, (const VMLTYPE*)src, (VMLTYPE*)dst);                           \
-    }                                                                            \
+#define EIGEN_VMLMODE_EXPAND__ 
+
+#define EIGEN_VMLMODE_PREFIX_LA vm
+#define EIGEN_VMLMODE_PREFIX__  v
+#define EIGEN_VMLMODE_PREFIX(VMLMODE) EIGEN_CAT(EIGEN_VMLMODE_PREFIX_,VMLMODE)
+
+#define EIGEN_MKL_VML_DECLARE_UNARY_CALL(EIGENOP, VMLOP, EIGENTYPE, VMLTYPE, VMLMODE)                                           \
+  template< typename DstXprType, typename SrcXprNested>                                                                         \
+  struct Assignment<DstXprType, CwiseUnaryOp<scalar_##EIGENOP##_op<EIGENTYPE>, SrcXprNested>, assign_op<EIGENTYPE,EIGENTYPE>,   \
+                   Dense2Dense, typename enable_if<vml_assign_traits<DstXprType,SrcXprNested>::EnableVml>::type> {              \
+    typedef CwiseUnaryOp<scalar_##EIGENOP##_op<EIGENTYPE>, SrcXprNested> SrcXprType;                                            \
+    static void run(DstXprType &dst, const SrcXprType &src, const assign_op<EIGENTYPE,EIGENTYPE> &func) {                       \
+      resize_if_allowed(dst, src, func);                                                                                        \
+      eigen_assert(dst.rows() == src.rows() && dst.cols() == src.cols());                                                       \
+      if(vml_assign_traits<DstXprType,SrcXprNested>::Traversal==LinearTraversal) {                                              \
+        VMLOP(dst.size(), (const VMLTYPE*)src.nestedExpression().data(),                                                        \
+              (VMLTYPE*)dst.data() EIGEN_PP_EXPAND(EIGEN_VMLMODE_EXPAND_##VMLMODE) );                                           \
+      } else {                                                                                                                  \
+        const Index outerSize = dst.outerSize();                                                                                \
+        for(Index outer = 0; outer < outerSize; ++outer) {                                                                      \
+          const EIGENTYPE *src_ptr = src.IsRowMajor ? &(src.nestedExpression().coeffRef(outer,0)) :                             \
+                                                      &(src.nestedExpression().coeffRef(0, outer));                             \
+          EIGENTYPE *dst_ptr = dst.IsRowMajor ? &(dst.coeffRef(outer,0)) : &(dst.coeffRef(0, outer));                           \
+          VMLOP( dst.innerSize(), (const VMLTYPE*)src_ptr,                                                                      \
+                (VMLTYPE*)dst_ptr EIGEN_PP_EXPAND(EIGEN_VMLMODE_EXPAND_##VMLMODE));                                             \
+        }                                                                                                                       \
+      }                                                                                                                         \
+    }                                                                                                                           \
+  };                                                                                                                            \
+
+
+#define EIGEN_MKL_VML_DECLARE_UNARY_CALLS_REAL(EIGENOP, VMLOP, VMLMODE)                                                         \
+  EIGEN_MKL_VML_DECLARE_UNARY_CALL(EIGENOP, EIGEN_CAT(EIGEN_VMLMODE_PREFIX(VMLMODE),s##VMLOP), float, float, VMLMODE)           \
+  EIGEN_MKL_VML_DECLARE_UNARY_CALL(EIGENOP, EIGEN_CAT(EIGEN_VMLMODE_PREFIX(VMLMODE),d##VMLOP), double, double, VMLMODE)
+
+#define EIGEN_MKL_VML_DECLARE_UNARY_CALLS_CPLX(EIGENOP, VMLOP, VMLMODE)                                                         \
+  EIGEN_MKL_VML_DECLARE_UNARY_CALL(EIGENOP, EIGEN_CAT(EIGEN_VMLMODE_PREFIX(VMLMODE),c##VMLOP), scomplex, MKL_Complex8, VMLMODE) \
+  EIGEN_MKL_VML_DECLARE_UNARY_CALL(EIGENOP, EIGEN_CAT(EIGEN_VMLMODE_PREFIX(VMLMODE),z##VMLOP), dcomplex, MKL_Complex16, VMLMODE)
+  
+#define EIGEN_MKL_VML_DECLARE_UNARY_CALLS(EIGENOP, VMLOP, VMLMODE)                                                              \
+  EIGEN_MKL_VML_DECLARE_UNARY_CALLS_REAL(EIGENOP, VMLOP, VMLMODE)                                                               \
+  EIGEN_MKL_VML_DECLARE_UNARY_CALLS_CPLX(EIGENOP, VMLOP, VMLMODE)
+
+  
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS(sin,   Sin,   LA)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS(asin,  Asin,  LA)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS(sinh,  Sinh,  LA)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS(cos,   Cos,   LA)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS(acos,  Acos,  LA)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS(cosh,  Cosh,  LA)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS(tan,   Tan,   LA)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS(atan,  Atan,  LA)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS(tanh,  Tanh,  LA)
+// EIGEN_MKL_VML_DECLARE_UNARY_CALLS(abs,   Abs,    _)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS(exp,   Exp,   LA)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS(log,   Ln,    LA)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS(log10, Log10, LA)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS(sqrt,  Sqrt,  _)
+
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS_REAL(square, Sqr,   _)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS_CPLX(arg, Arg,      _)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS_REAL(round, Round,  _)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS_REAL(floor, Floor,  _)
+EIGEN_MKL_VML_DECLARE_UNARY_CALLS_REAL(ceil,  Ceil,   _)
+
+#define EIGEN_MKL_VML_DECLARE_POW_CALL(EIGENOP, VMLOP, EIGENTYPE, VMLTYPE, VMLMODE)                                           \
+  template< typename DstXprType, typename SrcXprNested, typename Plain>                                                       \
+  struct Assignment<DstXprType, CwiseBinaryOp<scalar_##EIGENOP##_op<EIGENTYPE,EIGENTYPE>, SrcXprNested,                       \
+                    const CwiseNullaryOp<internal::scalar_constant_op<EIGENTYPE>,Plain> >, assign_op<EIGENTYPE,EIGENTYPE>,    \
+                   Dense2Dense, typename enable_if<vml_assign_traits<DstXprType,SrcXprNested>::EnableVml>::type> {            \
+    typedef CwiseBinaryOp<scalar_##EIGENOP##_op<EIGENTYPE,EIGENTYPE>, SrcXprNested,                                           \
+                    const CwiseNullaryOp<internal::scalar_constant_op<EIGENTYPE>,Plain> > SrcXprType;                         \
+    static void run(DstXprType &dst, const SrcXprType &src, const assign_op<EIGENTYPE,EIGENTYPE> &func) {                     \
+      resize_if_allowed(dst, src, func);                                                                                      \
+      eigen_assert(dst.rows() == src.rows() && dst.cols() == src.cols());                                                     \
+      VMLTYPE exponent = reinterpret_cast<const VMLTYPE&>(src.rhs().functor().m_other);                                       \
+      if(vml_assign_traits<DstXprType,SrcXprNested>::Traversal==LinearTraversal)                                              \
+      {                                                                                                                       \
+        VMLOP( dst.size(), (const VMLTYPE*)src.lhs().data(), exponent,                                                        \
+              (VMLTYPE*)dst.data() EIGEN_PP_EXPAND(EIGEN_VMLMODE_EXPAND_##VMLMODE) );                                         \
+      } else {                                                                                                                \
+        const Index outerSize = dst.outerSize();                                                                              \
+        for(Index outer = 0; outer < outerSize; ++outer) {                                                                    \
+          const EIGENTYPE *src_ptr = src.IsRowMajor ? &(src.lhs().coeffRef(outer,0)) :                                        \
+                                                      &(src.lhs().coeffRef(0, outer));                                        \
+          EIGENTYPE *dst_ptr = dst.IsRowMajor ? &(dst.coeffRef(outer,0)) : &(dst.coeffRef(0, outer));                         \
+          VMLOP( dst.innerSize(), (const VMLTYPE*)src_ptr, exponent,                                                          \
+                 (VMLTYPE*)dst_ptr EIGEN_PP_EXPAND(EIGEN_VMLMODE_EXPAND_##VMLMODE));                                          \
+        }                                                                                                                     \
+      }                                                                                                                       \
+    }                                                                                                                         \
   };
-
-#define EIGEN_MKL_VML_DECLARE_UNARY_CALL_LA(EIGENOP, VMLOP, EIGENTYPE, VMLTYPE)  \
-  template<> struct vml_call< scalar_##EIGENOP##_op<EIGENTYPE> > {               \
-    enum { IsSupported = 1 };                                                    \
-    static inline void run( const scalar_##EIGENOP##_op<EIGENTYPE>& /*func*/,        \
-                            int size, const EIGENTYPE* src, EIGENTYPE* dst) {    \
-      MKL_INT64 vmlMode = EIGEN_MKL_VML_MODE;                                    \
-      VMLOP(size, (const VMLTYPE*)src, (VMLTYPE*)dst, vmlMode);                  \
-    }                                                                            \
-  };
-
-#define EIGEN_MKL_VML_DECLARE_POW_CALL(EIGENOP, VMLOP, EIGENTYPE, VMLTYPE)       \
-  template<> struct vml_call< scalar_##EIGENOP##_op<EIGENTYPE> > {               \
-    enum { IsSupported = 1 };                                                    \
-    static inline void run( const scalar_##EIGENOP##_op<EIGENTYPE>& func,        \
-                          int size, const EIGENTYPE* src, EIGENTYPE* dst) {      \
-      EIGENTYPE exponent = func.m_exponent;                                      \
-      MKL_INT64 vmlMode = EIGEN_MKL_VML_MODE;                                    \
-      VMLOP(&size, (const VMLTYPE*)src, (const VMLTYPE*)&exponent,               \
-                        (VMLTYPE*)dst, &vmlMode);                                \
-    }                                                                            \
-  };
-
-#define EIGEN_MKL_VML_DECLARE_UNARY_CALLS_REAL(EIGENOP, VMLOP)                   \
-  EIGEN_MKL_VML_DECLARE_UNARY_CALL(EIGENOP, vs##VMLOP, float, float)             \
-  EIGEN_MKL_VML_DECLARE_UNARY_CALL(EIGENOP, vd##VMLOP, double, double)
-
-#define EIGEN_MKL_VML_DECLARE_UNARY_CALLS_COMPLEX(EIGENOP, VMLOP)                \
-  EIGEN_MKL_VML_DECLARE_UNARY_CALL(EIGENOP, vc##VMLOP, scomplex, MKL_Complex8)   \
-  EIGEN_MKL_VML_DECLARE_UNARY_CALL(EIGENOP, vz##VMLOP, dcomplex, MKL_Complex16)
-
-#define EIGEN_MKL_VML_DECLARE_UNARY_CALLS(EIGENOP, VMLOP)                        \
-  EIGEN_MKL_VML_DECLARE_UNARY_CALLS_REAL(EIGENOP, VMLOP)                         \
-  EIGEN_MKL_VML_DECLARE_UNARY_CALLS_COMPLEX(EIGENOP, VMLOP)
-
-
-#define EIGEN_MKL_VML_DECLARE_UNARY_CALLS_REAL_LA(EIGENOP, VMLOP)                \
-  EIGEN_MKL_VML_DECLARE_UNARY_CALL_LA(EIGENOP, vms##VMLOP, float, float)         \
-  EIGEN_MKL_VML_DECLARE_UNARY_CALL_LA(EIGENOP, vmd##VMLOP, double, double)
-
-#define EIGEN_MKL_VML_DECLARE_UNARY_CALLS_COMPLEX_LA(EIGENOP, VMLOP)             \
-  EIGEN_MKL_VML_DECLARE_UNARY_CALL_LA(EIGENOP, vmc##VMLOP, scomplex, MKL_Complex8)  \
-  EIGEN_MKL_VML_DECLARE_UNARY_CALL_LA(EIGENOP, vmz##VMLOP, dcomplex, MKL_Complex16)
-
-#define EIGEN_MKL_VML_DECLARE_UNARY_CALLS_LA(EIGENOP, VMLOP)                     \
-  EIGEN_MKL_VML_DECLARE_UNARY_CALLS_REAL_LA(EIGENOP, VMLOP)                      \
-  EIGEN_MKL_VML_DECLARE_UNARY_CALLS_COMPLEX_LA(EIGENOP, VMLOP)
-
-
-EIGEN_MKL_VML_DECLARE_UNARY_CALLS_LA(sin,  Sin)
-EIGEN_MKL_VML_DECLARE_UNARY_CALLS_LA(asin, Asin)
-EIGEN_MKL_VML_DECLARE_UNARY_CALLS_LA(cos,  Cos)
-EIGEN_MKL_VML_DECLARE_UNARY_CALLS_LA(acos, Acos)
-EIGEN_MKL_VML_DECLARE_UNARY_CALLS_LA(tan,  Tan)
-//EIGEN_MKL_VML_DECLARE_UNARY_CALLS(abs,  Abs)
-EIGEN_MKL_VML_DECLARE_UNARY_CALLS_LA(exp,  Exp)
-EIGEN_MKL_VML_DECLARE_UNARY_CALLS_LA(log,  Ln)
-EIGEN_MKL_VML_DECLARE_UNARY_CALLS_LA(sqrt, Sqrt)
-
-EIGEN_MKL_VML_DECLARE_UNARY_CALLS_REAL(square, Sqr)
-
-// The vm*powx functions are not avaibale in the windows version of MKL.
-#ifndef _WIN32
-EIGEN_MKL_VML_DECLARE_POW_CALL(pow, vmspowx_, float, float)
-EIGEN_MKL_VML_DECLARE_POW_CALL(pow, vmdpowx_, double, double)
-EIGEN_MKL_VML_DECLARE_POW_CALL(pow, vmcpowx_, scomplex, MKL_Complex8)
-EIGEN_MKL_VML_DECLARE_POW_CALL(pow, vmzpowx_, dcomplex, MKL_Complex16)
-#endif
+  
+EIGEN_MKL_VML_DECLARE_POW_CALL(pow, vmsPowx, float,    float,         LA)
+EIGEN_MKL_VML_DECLARE_POW_CALL(pow, vmdPowx, double,   double,        LA)
+EIGEN_MKL_VML_DECLARE_POW_CALL(pow, vmcPowx, scomplex, MKL_Complex8,  LA)
+EIGEN_MKL_VML_DECLARE_POW_CALL(pow, vmzPowx, dcomplex, MKL_Complex16, LA)
 
 } // end namespace internal
 

extern/Eigen3/Eigen/src/Core/BandMatrix.h

@@ -32,7 +32,7 @@ class BandMatrixBase : public EigenBase<Derived>
     };
     typedef typename internal::traits<Derived>::Scalar Scalar;
     typedef Matrix<Scalar,RowsAtCompileTime,ColsAtCompileTime> DenseMatrixType;
-    typedef typename DenseMatrixType::Index Index;
+    typedef typename DenseMatrixType::StorageIndex StorageIndex;
     typedef typename internal::traits<Derived>::CoefficientsType CoefficientsType;
     typedef EigenBase<Derived> Base;
 
@@ -161,15 +161,15 @@ class BandMatrixBase : public EigenBase<Derived>
   *
   * \brief Represents a rectangular matrix with a banded storage
   *
-  * \param _Scalar Numeric type, i.e. float, double, int
-  * \param Rows Number of rows, or \b Dynamic
-  * \param Cols Number of columns, or \b Dynamic
-  * \param Supers Number of super diagonal
-  * \param Subs Number of sub diagonal
-  * \param _Options A combination of either \b #RowMajor or \b #ColMajor, and of \b #SelfAdjoint
-  *                 The former controls \ref TopicStorageOrders "storage order", and defaults to
-  *                 column-major. The latter controls whether the matrix represents a selfadjoint 
-  *                 matrix in which case either Supers of Subs have to be null.
+  * \tparam _Scalar Numeric type, i.e. float, double, int
+  * \tparam _Rows Number of rows, or \b Dynamic
+  * \tparam _Cols Number of columns, or \b Dynamic
+  * \tparam _Supers Number of super diagonal
+  * \tparam _Subs Number of sub diagonal
+  * \tparam _Options A combination of either \b #RowMajor or \b #ColMajor, and of \b #SelfAdjoint
+  *                  The former controls \ref TopicStorageOrders "storage order", and defaults to
+  *                  column-major. The latter controls whether the matrix represents a selfadjoint
+  *                  matrix in which case either Supers of Subs have to be null.
   *
   * \sa class TridiagonalMatrix
   */
@@ -179,7 +179,7 @@ struct traits<BandMatrix<_Scalar,_Rows,_Cols,_Supers,_Subs,_Options> >
 {
   typedef _Scalar Scalar;
   typedef Dense StorageKind;
-  typedef DenseIndex Index;
+  typedef Eigen::Index StorageIndex;
   enum {
     CoeffReadCost = NumTraits<Scalar>::ReadCost,
     RowsAtCompileTime = _Rows,
@@ -201,10 +201,10 @@ class BandMatrix : public BandMatrixBase<BandMatrix<_Scalar,Rows,Cols,Supers,Sub
   public:
 
     typedef typename internal::traits<BandMatrix>::Scalar Scalar;
-    typedef typename internal::traits<BandMatrix>::Index Index;
+    typedef typename internal::traits<BandMatrix>::StorageIndex StorageIndex;
     typedef typename internal::traits<BandMatrix>::CoefficientsType CoefficientsType;
 
-    inline BandMatrix(Index rows=Rows, Index cols=Cols, Index supers=Supers, Index subs=Subs)
+    explicit inline BandMatrix(Index rows=Rows, Index cols=Cols, Index supers=Supers, Index subs=Subs)
       : m_coeffs(1+supers+subs,cols),
         m_rows(rows), m_supers(supers), m_subs(subs)
     {
@@ -241,7 +241,7 @@ struct traits<BandMatrixWrapper<_CoefficientsType,_Rows,_Cols,_Supers,_Subs,_Opt
 {
   typedef typename _CoefficientsType::Scalar Scalar;
   typedef typename _CoefficientsType::StorageKind StorageKind;
-  typedef typename _CoefficientsType::Index Index;
+  typedef typename _CoefficientsType::StorageIndex StorageIndex;
   enum {
     CoeffReadCost = internal::traits<_CoefficientsType>::CoeffReadCost,
     RowsAtCompileTime = _Rows,
@@ -264,9 +264,9 @@ class BandMatrixWrapper : public BandMatrixBase<BandMatrixWrapper<_CoefficientsT
 
     typedef typename internal::traits<BandMatrixWrapper>::Scalar Scalar;
     typedef typename internal::traits<BandMatrixWrapper>::CoefficientsType CoefficientsType;
-    typedef typename internal::traits<BandMatrixWrapper>::Index Index;
+    typedef typename internal::traits<BandMatrixWrapper>::StorageIndex StorageIndex;
 
-    inline BandMatrixWrapper(const CoefficientsType& coeffs, Index rows=_Rows, Index cols=_Cols, Index supers=_Supers, Index subs=_Subs)
+    explicit inline BandMatrixWrapper(const CoefficientsType& coeffs, Index rows=_Rows, Index cols=_Cols, Index supers=_Supers, Index subs=_Subs)
       : m_coeffs(coeffs),
         m_rows(rows), m_supers(supers), m_subs(subs)
     {
@@ -302,9 +302,9 @@ class BandMatrixWrapper : public BandMatrixBase<BandMatrixWrapper<_CoefficientsT
   *
   * \brief Represents a tridiagonal matrix with a compact banded storage
   *
-  * \param _Scalar Numeric type, i.e. float, double, int
-  * \param Size Number of rows and cols, or \b Dynamic
-  * \param _Options Can be 0 or \b SelfAdjoint
+  * \tparam Scalar Numeric type, i.e. float, double, int
+  * \tparam Size Number of rows and cols, or \b Dynamic
+  * \tparam Options Can be 0 or \b SelfAdjoint
   *
   * \sa class BandMatrix
   */
@@ -312,9 +312,9 @@ template<typename Scalar, int Size, int Options>
 class TridiagonalMatrix : public BandMatrix<Scalar,Size,Size,Options&SelfAdjoint?0:1,1,Options|RowMajor>
 {
     typedef BandMatrix<Scalar,Size,Size,Options&SelfAdjoint?0:1,1,Options|RowMajor> Base;
-    typedef typename Base::Index Index;
+    typedef typename Base::StorageIndex StorageIndex;
   public:
-    TridiagonalMatrix(Index size = Size) : Base(size,size,Options&SelfAdjoint?0:1,1) {}
+    explicit TridiagonalMatrix(Index size = Size) : Base(size,size,Options&SelfAdjoint?0:1,1) {}
 
     inline typename Base::template DiagonalIntReturnType<1>::Type super()
     { return Base::template diagonal<1>(); }
@@ -327,6 +327,25 @@ class TridiagonalMatrix : public BandMatrix<Scalar,Size,Size,Options&SelfAdjoint
   protected:
 };
 
+
+struct BandShape {};
+
+template<typename _Scalar, int _Rows, int _Cols, int _Supers, int _Subs, int _Options>
+struct evaluator_traits<BandMatrix<_Scalar,_Rows,_Cols,_Supers,_Subs,_Options> >
+  : public evaluator_traits_base<BandMatrix<_Scalar,_Rows,_Cols,_Supers,_Subs,_Options> >
+{
+  typedef BandShape Shape;
+};
+
+template<typename _CoefficientsType,int _Rows, int _Cols, int _Supers, int _Subs,int _Options>
+struct evaluator_traits<BandMatrixWrapper<_CoefficientsType,_Rows,_Cols,_Supers,_Subs,_Options> >
+  : public evaluator_traits_base<BandMatrixWrapper<_CoefficientsType,_Rows,_Cols,_Supers,_Subs,_Options> >
+{
+  typedef BandShape Shape;
+};
+
+template<> struct AssignmentKind<DenseShape,BandShape> { typedef EigenBase2EigenBase Kind; };
+
 } // end namespace internal
 
 } // end namespace Eigen

extern/Eigen3/Eigen/src/Core/Block.h

@@ -13,14 +13,70 @@
 
 namespace Eigen { 
 
+namespace internal {
+template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel>
+struct traits<Block<XprType, BlockRows, BlockCols, InnerPanel> > : traits<XprType>
+{
+  typedef typename traits<XprType>::Scalar Scalar;
+  typedef typename traits<XprType>::StorageKind StorageKind;
+  typedef typename traits<XprType>::XprKind XprKind;
+  typedef typename ref_selector<XprType>::type XprTypeNested;
+  typedef typename remove_reference<XprTypeNested>::type _XprTypeNested;
+  enum{
+    MatrixRows = traits<XprType>::RowsAtCompileTime,
+    MatrixCols = traits<XprType>::ColsAtCompileTime,
+    RowsAtCompileTime = MatrixRows == 0 ? 0 : BlockRows,
+    ColsAtCompileTime = MatrixCols == 0 ? 0 : BlockCols,
+    MaxRowsAtCompileTime = BlockRows==0 ? 0
+                         : RowsAtCompileTime != Dynamic ? int(RowsAtCompileTime)
+                         : int(traits<XprType>::MaxRowsAtCompileTime),
+    MaxColsAtCompileTime = BlockCols==0 ? 0
+                         : ColsAtCompileTime != Dynamic ? int(ColsAtCompileTime)
+                         : int(traits<XprType>::MaxColsAtCompileTime),
+
+    XprTypeIsRowMajor = (int(traits<XprType>::Flags)&RowMajorBit) != 0,
+    IsRowMajor = (MaxRowsAtCompileTime==1&&MaxColsAtCompileTime!=1) ? 1
+               : (MaxColsAtCompileTime==1&&MaxRowsAtCompileTime!=1) ? 0
+               : XprTypeIsRowMajor,
+    HasSameStorageOrderAsXprType = (IsRowMajor == XprTypeIsRowMajor),
+    InnerSize = IsRowMajor ? int(ColsAtCompileTime) : int(RowsAtCompileTime),
+    InnerStrideAtCompileTime = HasSameStorageOrderAsXprType
+                             ? int(inner_stride_at_compile_time<XprType>::ret)
+                             : int(outer_stride_at_compile_time<XprType>::ret),
+    OuterStrideAtCompileTime = HasSameStorageOrderAsXprType
+                             ? int(outer_stride_at_compile_time<XprType>::ret)
+                             : int(inner_stride_at_compile_time<XprType>::ret),
+
+    // FIXME, this traits is rather specialized for dense object and it needs to be cleaned further
+    FlagsLvalueBit = is_lvalue<XprType>::value ? LvalueBit : 0,
+    FlagsRowMajorBit = IsRowMajor ? RowMajorBit : 0,
+    Flags = (traits<XprType>::Flags & (DirectAccessBit | (InnerPanel?CompressedAccessBit:0))) | FlagsLvalueBit | FlagsRowMajorBit,
+    // FIXME DirectAccessBit should not be handled by expressions
+    // 
+    // Alignment is needed by MapBase's assertions
+    // We can sefely set it to false here. Internal alignment errors will be detected by an eigen_internal_assert in the respective evaluator
+    Alignment = 0
+  };
+};
+
+template<typename XprType, int BlockRows=Dynamic, int BlockCols=Dynamic, bool InnerPanel = false,
+         bool HasDirectAccess = internal::has_direct_access<XprType>::ret> class BlockImpl_dense;
+         
+} // end namespace internal
+
+template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel, typename StorageKind> class BlockImpl;
+
 /** \class Block
   * \ingroup Core_Module
   *
   * \brief Expression of a fixed-size or dynamic-size block
   *
-  * \param XprType the type of the expression in which we are taking a block
-  * \param BlockRows the number of rows of the block we are taking at compile time (optional)
-  * \param BlockCols the number of columns of the block we are taking at compile time (optional)
+  * \tparam XprType the type of the expression in which we are taking a block
+  * \tparam BlockRows the number of rows of the block we are taking at compile time (optional)
+  * \tparam BlockCols the number of columns of the block we are taking at compile time (optional)
+  * \tparam InnerPanel is true, if the block maps to a set of rows of a row major matrix or
+  *         to set of columns of a column major matrix (optional). The parameter allows to determine
+  *         at compile time whether aligned access is possible on the block expression.
   *
   * This class represents an expression of either a fixed-size or dynamic-size block. It is the return
   * type of DenseBase::block(Index,Index,Index,Index) and DenseBase::block<int,int>(Index,Index) and
@@ -44,62 +100,6 @@ namespace Eigen {
   *
   * \sa DenseBase::block(Index,Index,Index,Index), DenseBase::block(Index,Index), class VectorBlock
   */
-
-namespace internal {
-template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel>
-struct traits<Block<XprType, BlockRows, BlockCols, InnerPanel> > : traits<XprType>
-{
-  typedef typename traits<XprType>::Scalar Scalar;
-  typedef typename traits<XprType>::StorageKind StorageKind;
-  typedef typename traits<XprType>::XprKind XprKind;
-  typedef typename nested<XprType>::type XprTypeNested;
-  typedef typename remove_reference<XprTypeNested>::type _XprTypeNested;
-  enum{
-    MatrixRows = traits<XprType>::RowsAtCompileTime,
-    MatrixCols = traits<XprType>::ColsAtCompileTime,
-    RowsAtCompileTime = MatrixRows == 0 ? 0 : BlockRows,
-    ColsAtCompileTime = MatrixCols == 0 ? 0 : BlockCols,
-    MaxRowsAtCompileTime = BlockRows==0 ? 0
-                         : RowsAtCompileTime != Dynamic ? int(RowsAtCompileTime)
-                         : int(traits<XprType>::MaxRowsAtCompileTime),
-    MaxColsAtCompileTime = BlockCols==0 ? 0
-                         : ColsAtCompileTime != Dynamic ? int(ColsAtCompileTime)
-                         : int(traits<XprType>::MaxColsAtCompileTime),
-    XprTypeIsRowMajor = (int(traits<XprType>::Flags)&RowMajorBit) != 0,
-    IsDense = is_same<StorageKind,Dense>::value,
-    IsRowMajor = (IsDense&&MaxRowsAtCompileTime==1&&MaxColsAtCompileTime!=1) ? 1
-               : (IsDense&&MaxColsAtCompileTime==1&&MaxRowsAtCompileTime!=1) ? 0
-               : XprTypeIsRowMajor,
-    HasSameStorageOrderAsXprType = (IsRowMajor == XprTypeIsRowMajor),
-    InnerSize = IsRowMajor ? int(ColsAtCompileTime) : int(RowsAtCompileTime),
-    InnerStrideAtCompileTime = HasSameStorageOrderAsXprType
-                             ? int(inner_stride_at_compile_time<XprType>::ret)
-                             : int(outer_stride_at_compile_time<XprType>::ret),
-    OuterStrideAtCompileTime = HasSameStorageOrderAsXprType
-                             ? int(outer_stride_at_compile_time<XprType>::ret)
-                             : int(inner_stride_at_compile_time<XprType>::ret),
-    MaskPacketAccessBit = (InnerSize == Dynamic || (InnerSize % packet_traits<Scalar>::size) == 0)
-                       && (InnerStrideAtCompileTime == 1)
-                        ? PacketAccessBit : 0,
-    MaskAlignedBit = (InnerPanel && (OuterStrideAtCompileTime!=Dynamic) && (((OuterStrideAtCompileTime * int(sizeof(Scalar))) % 16) == 0)) ? AlignedBit : 0,
-    FlagsLinearAccessBit = (RowsAtCompileTime == 1 || ColsAtCompileTime == 1 || (InnerPanel && (traits<XprType>::Flags&LinearAccessBit))) ? LinearAccessBit : 0,
-    FlagsLvalueBit = is_lvalue<XprType>::value ? LvalueBit : 0,
-    FlagsRowMajorBit = IsRowMajor ? RowMajorBit : 0,
-    Flags0 = traits<XprType>::Flags & ( (HereditaryBits & ~RowMajorBit) |
-                                        DirectAccessBit |
-                                        MaskPacketAccessBit |
-                                        MaskAlignedBit),
-    Flags = Flags0 | FlagsLinearAccessBit | FlagsLvalueBit | FlagsRowMajorBit
-  };
-};
-
-template<typename XprType, int BlockRows=Dynamic, int BlockCols=Dynamic, bool InnerPanel = false,
-         bool HasDirectAccess = internal::has_direct_access<XprType>::ret> class BlockImpl_dense;
-         
-} // end namespace internal
-
-template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel, typename StorageKind> class BlockImpl;
-
 template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
   : public BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, typename internal::traits<XprType>::StorageKind>
 {
@@ -109,9 +109,12 @@ template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class
     typedef Impl Base;
     EIGEN_GENERIC_PUBLIC_INTERFACE(Block)
     EIGEN_INHERIT_ASSIGNMENT_OPERATORS(Block)
+    
+    typedef typename internal::remove_all<XprType>::type NestedExpression;
   
     /** Column or Row constructor
       */
+    EIGEN_DEVICE_FUNC
     inline Block(XprType& xpr, Index i) : Impl(xpr,i)
     {
       eigen_assert( (i>=0) && (
@@ -121,25 +124,27 @@ template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class
 
     /** Fixed-size constructor
       */
-    inline Block(XprType& xpr, Index a_startRow, Index a_startCol)
-      : Impl(xpr, a_startRow, a_startCol)
+    EIGEN_DEVICE_FUNC
+    inline Block(XprType& xpr, Index startRow, Index startCol)
+      : Impl(xpr, startRow, startCol)
     {
       EIGEN_STATIC_ASSERT(RowsAtCompileTime!=Dynamic && ColsAtCompileTime!=Dynamic,THIS_METHOD_IS_ONLY_FOR_FIXED_SIZE)
-      eigen_assert(a_startRow >= 0 && BlockRows >= 1 && a_startRow + BlockRows <= xpr.rows()
-             && a_startCol >= 0 && BlockCols >= 1 && a_startCol + BlockCols <= xpr.cols());
+      eigen_assert(startRow >= 0 && BlockRows >= 0 && startRow + BlockRows <= xpr.rows()
+             && startCol >= 0 && BlockCols >= 0 && startCol + BlockCols <= xpr.cols());
     }
 
     /** Dynamic-size constructor
       */
+    EIGEN_DEVICE_FUNC
     inline Block(XprType& xpr,
-          Index a_startRow, Index a_startCol,
+          Index startRow, Index startCol,
           Index blockRows, Index blockCols)
-      : Impl(xpr, a_startRow, a_startCol, blockRows, blockCols)
+      : Impl(xpr, startRow, startCol, blockRows, blockCols)
     {
       eigen_assert((RowsAtCompileTime==Dynamic || RowsAtCompileTime==blockRows)
           && (ColsAtCompileTime==Dynamic || ColsAtCompileTime==blockCols));
-      eigen_assert(a_startRow >= 0 && blockRows >= 0 && a_startRow  <= xpr.rows() - blockRows
-          && a_startCol >= 0 && blockCols >= 0 && a_startCol <= xpr.cols() - blockCols);
+      eigen_assert(startRow >= 0 && blockRows >= 0 && startRow  <= xpr.rows() - blockRows
+          && startCol >= 0 && blockCols >= 0 && startCol <= xpr.cols() - blockCols);
     }
 };
          
@@ -150,14 +155,15 @@ class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
   : public internal::BlockImpl_dense<XprType, BlockRows, BlockCols, InnerPanel>
 {
     typedef internal::BlockImpl_dense<XprType, BlockRows, BlockCols, InnerPanel> Impl;
-    typedef typename XprType::Index Index;
+    typedef typename XprType::StorageIndex StorageIndex;
   public:
     typedef Impl Base;
     EIGEN_INHERIT_ASSIGNMENT_OPERATORS(BlockImpl)
-    inline BlockImpl(XprType& xpr, Index i) : Impl(xpr,i) {}
-    inline BlockImpl(XprType& xpr, Index a_startRow, Index a_startCol) : Impl(xpr, a_startRow, a_startCol) {}
-    inline BlockImpl(XprType& xpr, Index a_startRow, Index a_startCol, Index blockRows, Index blockCols)
-      : Impl(xpr, a_startRow, a_startCol, blockRows, blockCols) {}
+    EIGEN_DEVICE_FUNC inline BlockImpl(XprType& xpr, Index i) : Impl(xpr,i) {}
+    EIGEN_DEVICE_FUNC inline BlockImpl(XprType& xpr, Index startRow, Index startCol) : Impl(xpr, startRow, startCol) {}
+    EIGEN_DEVICE_FUNC
+    inline BlockImpl(XprType& xpr, Index startRow, Index startCol, Index blockRows, Index blockCols)
+      : Impl(xpr, startRow, startCol, blockRows, blockCols) {}
 };
 
 namespace internal {
@@ -167,16 +173,18 @@ template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel, bool H
   : public internal::dense_xpr_base<Block<XprType, BlockRows, BlockCols, InnerPanel> >::type
 {
     typedef Block<XprType, BlockRows, BlockCols, InnerPanel> BlockType;
+    typedef typename internal::ref_selector<XprType>::non_const_type XprTypeNested;
   public:
 
     typedef typename internal::dense_xpr_base<BlockType>::type Base;
     EIGEN_DENSE_PUBLIC_INTERFACE(BlockType)
     EIGEN_INHERIT_ASSIGNMENT_OPERATORS(BlockImpl_dense)
 
-    class InnerIterator;
+    // class InnerIterator; // FIXME apparently never used
 
     /** Column or Row constructor
       */
+    EIGEN_DEVICE_FUNC
     inline BlockImpl_dense(XprType& xpr, Index i)
       : m_xpr(xpr),
         // It is a row if and only if BlockRows==1 and BlockCols==XprType::ColsAtCompileTime,
@@ -191,75 +199,76 @@ template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel, bool H
 
     /** Fixed-size constructor
       */
-    inline BlockImpl_dense(XprType& xpr, Index a_startRow, Index a_startCol)
-      : m_xpr(xpr), m_startRow(a_startRow), m_startCol(a_startCol),
+    EIGEN_DEVICE_FUNC
+    inline BlockImpl_dense(XprType& xpr, Index startRow, Index startCol)
+      : m_xpr(xpr), m_startRow(startRow), m_startCol(startCol),
                     m_blockRows(BlockRows), m_blockCols(BlockCols)
     {}
 
     /** Dynamic-size constructor
       */
+    EIGEN_DEVICE_FUNC
     inline BlockImpl_dense(XprType& xpr,
-          Index a_startRow, Index a_startCol,
+          Index startRow, Index startCol,
           Index blockRows, Index blockCols)
-      : m_xpr(xpr), m_startRow(a_startRow), m_startCol(a_startCol),
+      : m_xpr(xpr), m_startRow(startRow), m_startCol(startCol),
                     m_blockRows(blockRows), m_blockCols(blockCols)
     {}
 
-    inline Index rows() const { return m_blockRows.value(); }
-    inline Index cols() const { return m_blockCols.value(); }
+    EIGEN_DEVICE_FUNC inline Index rows() const { return m_blockRows.value(); }
+    EIGEN_DEVICE_FUNC inline Index cols() const { return m_blockCols.value(); }
 
+    EIGEN_DEVICE_FUNC
     inline Scalar& coeffRef(Index rowId, Index colId)
     {
       EIGEN_STATIC_ASSERT_LVALUE(XprType)
-      return m_xpr.const_cast_derived()
-               .coeffRef(rowId + m_startRow.value(), colId + m_startCol.value());
+      return m_xpr.coeffRef(rowId + m_startRow.value(), colId + m_startCol.value());
     }
 
+    EIGEN_DEVICE_FUNC
     inline const Scalar& coeffRef(Index rowId, Index colId) const
     {
-      return m_xpr.derived()
-               .coeffRef(rowId + m_startRow.value(), colId + m_startCol.value());
+      return m_xpr.derived().coeffRef(rowId + m_startRow.value(), colId + m_startCol.value());
     }
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE const CoeffReturnType coeff(Index rowId, Index colId) const
     {
       return m_xpr.coeff(rowId + m_startRow.value(), colId + m_startCol.value());
     }
 
+    EIGEN_DEVICE_FUNC
     inline Scalar& coeffRef(Index index)
     {
       EIGEN_STATIC_ASSERT_LVALUE(XprType)
-      return m_xpr.const_cast_derived()
-             .coeffRef(m_startRow.value() + (RowsAtCompileTime == 1 ? 0 : index),
-                       m_startCol.value() + (RowsAtCompileTime == 1 ? index : 0));
+      return m_xpr.coeffRef(m_startRow.value() + (RowsAtCompileTime == 1 ? 0 : index),
+                            m_startCol.value() + (RowsAtCompileTime == 1 ? index : 0));
     }
 
+    EIGEN_DEVICE_FUNC
     inline const Scalar& coeffRef(Index index) const
     {
-      return m_xpr.const_cast_derived()
-             .coeffRef(m_startRow.value() + (RowsAtCompileTime == 1 ? 0 : index),
-                       m_startCol.value() + (RowsAtCompileTime == 1 ? index : 0));
+      return m_xpr.coeffRef(m_startRow.value() + (RowsAtCompileTime == 1 ? 0 : index),
+                            m_startCol.value() + (RowsAtCompileTime == 1 ? index : 0));
     }
 
+    EIGEN_DEVICE_FUNC
     inline const CoeffReturnType coeff(Index index) const
     {
-      return m_xpr
-             .coeff(m_startRow.value() + (RowsAtCompileTime == 1 ? 0 : index),
-                    m_startCol.value() + (RowsAtCompileTime == 1 ? index : 0));
+      return m_xpr.coeff(m_startRow.value() + (RowsAtCompileTime == 1 ? 0 : index),
+                         m_startCol.value() + (RowsAtCompileTime == 1 ? index : 0));
     }
 
     template<int LoadMode>
     inline PacketScalar packet(Index rowId, Index colId) const
     {
-      return m_xpr.template packet<Unaligned>
-              (rowId + m_startRow.value(), colId + m_startCol.value());
+      return m_xpr.template packet<Unaligned>(rowId + m_startRow.value(), colId + m_startCol.value());
     }
 
     template<int LoadMode>
     inline void writePacket(Index rowId, Index colId, const PacketScalar& val)
     {
-      m_xpr.const_cast_derived().template writePacket<Unaligned>
-              (rowId + m_startRow.value(), colId + m_startCol.value(), val);
+      m_xpr.template writePacket<Unaligned>(rowId + m_startRow.value(), colId + m_startCol.value(), val);
     }
 
     template<int LoadMode>
@@ -273,40 +282,46 @@ template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel, bool H
     template<int LoadMode>
     inline void writePacket(Index index, const PacketScalar& val)
     {
-      m_xpr.const_cast_derived().template writePacket<Unaligned>
+      m_xpr.template writePacket<Unaligned>
          (m_startRow.value() + (RowsAtCompileTime == 1 ? 0 : index),
           m_startCol.value() + (RowsAtCompileTime == 1 ? index : 0), val);
     }
 
     #ifdef EIGEN_PARSED_BY_DOXYGEN
     /** \sa MapBase::data() */
-    inline const Scalar* data() const;
-    inline Index innerStride() const;
-    inline Index outerStride() const;
+    EIGEN_DEVICE_FUNC inline const Scalar* data() const;
+    EIGEN_DEVICE_FUNC inline Index innerStride() const;
+    EIGEN_DEVICE_FUNC inline Index outerStride() const;
     #endif
 
-    const typename internal::remove_all<typename XprType::Nested>::type& nestedExpression() const 
+    EIGEN_DEVICE_FUNC
+    const typename internal::remove_all<XprTypeNested>::type& nestedExpression() const
     { 
       return m_xpr; 
     }
+
+    EIGEN_DEVICE_FUNC
+    XprType& nestedExpression() { return m_xpr; }
       
-    Index startRow() const 
+    EIGEN_DEVICE_FUNC
+    StorageIndex startRow() const
     { 
       return m_startRow.value(); 
     }
       
-    Index startCol() const 
+    EIGEN_DEVICE_FUNC
+    StorageIndex startCol() const
     { 
       return m_startCol.value(); 
     }
 
   protected:
 
-    const typename XprType::Nested m_xpr;
-    const internal::variable_if_dynamic<Index, XprType::RowsAtCompileTime == 1 ? 0 : Dynamic> m_startRow;
-    const internal::variable_if_dynamic<Index, XprType::ColsAtCompileTime == 1 ? 0 : Dynamic> m_startCol;
-    const internal::variable_if_dynamic<Index, RowsAtCompileTime> m_blockRows;
-    const internal::variable_if_dynamic<Index, ColsAtCompileTime> m_blockCols;
+    XprTypeNested m_xpr;
+    const internal::variable_if_dynamic<StorageIndex, (XprType::RowsAtCompileTime == 1 && BlockRows==1) ? 0 : Dynamic> m_startRow;
+    const internal::variable_if_dynamic<StorageIndex, (XprType::ColsAtCompileTime == 1 && BlockCols==1) ? 0 : Dynamic> m_startCol;
+    const internal::variable_if_dynamic<StorageIndex, RowsAtCompileTime> m_blockRows;
+    const internal::variable_if_dynamic<StorageIndex, ColsAtCompileTime> m_blockCols;
 };
 
 /** \internal Internal implementation of dense Blocks in the direct access case.*/
@@ -315,6 +330,10 @@ class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
   : public MapBase<Block<XprType, BlockRows, BlockCols, InnerPanel> >
 {
     typedef Block<XprType, BlockRows, BlockCols, InnerPanel> BlockType;
+    typedef typename internal::ref_selector<XprType>::non_const_type XprTypeNested;
+    enum {
+      XprTypeIsRowMajor = (int(traits<XprType>::Flags)&RowMajorBit) != 0
+    };
   public:
 
     typedef MapBase<BlockType> Base;
@@ -323,42 +342,52 @@ class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
 
     /** Column or Row constructor
       */
+    EIGEN_DEVICE_FUNC
     inline BlockImpl_dense(XprType& xpr, Index i)
-      : Base(internal::const_cast_ptr(&xpr.coeffRef(
-              (BlockRows==1) && (BlockCols==XprType::ColsAtCompileTime) ? i : 0,
-              (BlockRows==XprType::RowsAtCompileTime) && (BlockCols==1) ? i : 0)),
+      : Base(xpr.data() + i * (    ((BlockRows==1) && (BlockCols==XprType::ColsAtCompileTime) && (!XprTypeIsRowMajor)) 
+                                || ((BlockRows==XprType::RowsAtCompileTime) && (BlockCols==1) && ( XprTypeIsRowMajor)) ? xpr.innerStride() : xpr.outerStride()),
              BlockRows==1 ? 1 : xpr.rows(),
              BlockCols==1 ? 1 : xpr.cols()),
-        m_xpr(xpr)
+        m_xpr(xpr),
+        m_startRow( (BlockRows==1) && (BlockCols==XprType::ColsAtCompileTime) ? i : 0),
+        m_startCol( (BlockRows==XprType::RowsAtCompileTime) && (BlockCols==1) ? i : 0)
     {
       init();
     }
 
     /** Fixed-size constructor
       */
+    EIGEN_DEVICE_FUNC
     inline BlockImpl_dense(XprType& xpr, Index startRow, Index startCol)
-      : Base(internal::const_cast_ptr(&xpr.coeffRef(startRow,startCol))), m_xpr(xpr)
+      : Base(xpr.data()+xpr.innerStride()*(XprTypeIsRowMajor?startCol:startRow) + xpr.outerStride()*(XprTypeIsRowMajor?startRow:startCol)),
+        m_xpr(xpr), m_startRow(startRow), m_startCol(startCol)
     {
       init();
     }
 
     /** Dynamic-size constructor
       */
+    EIGEN_DEVICE_FUNC
     inline BlockImpl_dense(XprType& xpr,
           Index startRow, Index startCol,
           Index blockRows, Index blockCols)
-      : Base(internal::const_cast_ptr(&xpr.coeffRef(startRow,startCol)), blockRows, blockCols),
-        m_xpr(xpr)
+      : Base(xpr.data()+xpr.innerStride()*(XprTypeIsRowMajor?startCol:startRow) + xpr.outerStride()*(XprTypeIsRowMajor?startRow:startCol), blockRows, blockCols),
+        m_xpr(xpr), m_startRow(startRow), m_startCol(startCol)
     {
       init();
     }
 
-    const typename internal::remove_all<typename XprType::Nested>::type& nestedExpression() const 
+    EIGEN_DEVICE_FUNC
+    const typename internal::remove_all<XprTypeNested>::type& nestedExpression() const
     { 
       return m_xpr; 
     }
+
+    EIGEN_DEVICE_FUNC
+    XprType& nestedExpression() { return m_xpr; }
       
     /** \sa MapBase::innerStride() */
+    EIGEN_DEVICE_FUNC
     inline Index innerStride() const
     {
       return internal::traits<BlockType>::HasSameStorageOrderAsXprType
@@ -367,11 +396,24 @@ class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
     }
 
     /** \sa MapBase::outerStride() */
+    EIGEN_DEVICE_FUNC
     inline Index outerStride() const
     {
       return m_outerStride;
     }
 
+    EIGEN_DEVICE_FUNC
+    StorageIndex startRow() const
+    {
+      return m_startRow.value();
+    }
+
+    EIGEN_DEVICE_FUNC
+    StorageIndex startCol() const
+    {
+      return m_startCol.value();
+    }
+
   #ifndef __SUNPRO_CC
   // FIXME sunstudio is not friendly with the above friend...
   // META-FIXME there is no 'friend' keyword around here. Is this obsolete?
@@ -380,6 +422,7 @@ class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
 
     #ifndef EIGEN_PARSED_BY_DOXYGEN
     /** \internal used by allowAligned() */
+    EIGEN_DEVICE_FUNC
     inline BlockImpl_dense(XprType& xpr, const Scalar* data, Index blockRows, Index blockCols)
       : Base(data, blockRows, blockCols), m_xpr(xpr)
     {
@@ -388,6 +431,7 @@ class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
     #endif
 
   protected:
+    EIGEN_DEVICE_FUNC
     void init()
     {
       m_outerStride = internal::traits<BlockType>::HasSameStorageOrderAsXprType
@@ -395,7 +439,9 @@ class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
                     : m_xpr.innerStride();
     }
 
-    typename XprType::Nested m_xpr;
+    XprTypeNested m_xpr;
+    const internal::variable_if_dynamic<StorageIndex, (XprType::RowsAtCompileTime == 1 && BlockRows==1) ? 0 : Dynamic> m_startRow;
+    const internal::variable_if_dynamic<StorageIndex, (XprType::ColsAtCompileTime == 1 && BlockCols==1) ? 0 : Dynamic> m_startCol;
     Index m_outerStride;
 };
 

extern/Eigen3/Eigen/src/Core/BooleanRedux.h

@@ -17,9 +17,10 @@ namespace internal {
 template<typename Derived, int UnrollCount>
 struct all_unroller
 {
+  typedef typename Derived::ExpressionTraits Traits;
   enum {
-    col = (UnrollCount-1) / Derived::RowsAtCompileTime,
-    row = (UnrollCount-1) % Derived::RowsAtCompileTime
+    col = (UnrollCount-1) / Traits::RowsAtCompileTime,
+    row = (UnrollCount-1) % Traits::RowsAtCompileTime
   };
 
   static inline bool run(const Derived &mat)
@@ -43,11 +44,12 @@ struct all_unroller<Derived, Dynamic>
 template<typename Derived, int UnrollCount>
 struct any_unroller
 {
+  typedef typename Derived::ExpressionTraits Traits;
   enum {
-    col = (UnrollCount-1) / Derived::RowsAtCompileTime,
-    row = (UnrollCount-1) % Derived::RowsAtCompileTime
+    col = (UnrollCount-1) / Traits::RowsAtCompileTime,
+    row = (UnrollCount-1) % Traits::RowsAtCompileTime
   };
-
+  
   static inline bool run(const Derived &mat)
   {
     return any_unroller<Derived, UnrollCount-1>::run(mat) || mat.coeff(row, col);
@@ -78,19 +80,19 @@ struct any_unroller<Derived, Dynamic>
 template<typename Derived>
 inline bool DenseBase<Derived>::all() const
 {
+  typedef internal::evaluator<Derived> Evaluator;
   enum {
     unroll = SizeAtCompileTime != Dynamic
-          && CoeffReadCost != Dynamic
-          && NumTraits<Scalar>::AddCost != Dynamic
-          && SizeAtCompileTime * (CoeffReadCost + NumTraits<Scalar>::AddCost) <= EIGEN_UNROLLING_LIMIT
+          && SizeAtCompileTime * (Evaluator::CoeffReadCost + NumTraits<Scalar>::AddCost) <= EIGEN_UNROLLING_LIMIT
   };
+  Evaluator evaluator(derived());
   if(unroll)
-    return internal::all_unroller<Derived, unroll ? int(SizeAtCompileTime) : Dynamic>::run(derived());
+    return internal::all_unroller<Evaluator, unroll ? int(SizeAtCompileTime) : Dynamic>::run(evaluator);
   else
   {
     for(Index j = 0; j < cols(); ++j)
       for(Index i = 0; i < rows(); ++i)
-        if (!coeff(i, j)) return false;
+        if (!evaluator.coeff(i, j)) return false;
     return true;
   }
 }
@@ -102,19 +104,19 @@ inline bool DenseBase<Derived>::all() const
 template<typename Derived>
 inline bool DenseBase<Derived>::any() const
 {
+  typedef internal::evaluator<Derived> Evaluator;
   enum {
     unroll = SizeAtCompileTime != Dynamic
-          && CoeffReadCost != Dynamic
-          && NumTraits<Scalar>::AddCost != Dynamic
-          && SizeAtCompileTime * (CoeffReadCost + NumTraits<Scalar>::AddCost) <= EIGEN_UNROLLING_LIMIT
+          && SizeAtCompileTime * (Evaluator::CoeffReadCost + NumTraits<Scalar>::AddCost) <= EIGEN_UNROLLING_LIMIT
   };
+  Evaluator evaluator(derived());
   if(unroll)
-    return internal::any_unroller<Derived, unroll ? int(SizeAtCompileTime) : Dynamic>::run(derived());
+    return internal::any_unroller<Evaluator, unroll ? int(SizeAtCompileTime) : Dynamic>::run(evaluator);
   else
   {
     for(Index j = 0; j < cols(); ++j)
       for(Index i = 0; i < rows(); ++i)
-        if (coeff(i, j)) return true;
+        if (evaluator.coeff(i, j)) return true;
     return false;
   }
 }
@@ -124,7 +126,7 @@ inline bool DenseBase<Derived>::any() const
   * \sa all(), any()
   */
 template<typename Derived>
-inline typename DenseBase<Derived>::Index DenseBase<Derived>::count() const
+inline Eigen::Index DenseBase<Derived>::count() const
 {
   return derived().template cast<bool>().template cast<Index>().sum();
 }
@@ -136,7 +138,11 @@ inline typename DenseBase<Derived>::Index DenseBase<Derived>::count() const
 template<typename Derived>
 inline bool DenseBase<Derived>::hasNaN() const
 {
+#if EIGEN_COMP_MSVC || (defined __FAST_MATH__)
+  return derived().array().isNaN().any();
+#else
   return !((derived().array()==derived().array()).all());
+#endif
 }
 
 /** \returns true if \c *this contains only finite numbers, i.e., no NaN and no +/-INF values.
@@ -146,7 +152,11 @@ inline bool DenseBase<Derived>::hasNaN() const
 template<typename Derived>
 inline bool DenseBase<Derived>::allFinite() const
 {
+#if EIGEN_COMP_MSVC || (defined __FAST_MATH__)
+  return derived().array().isFinite().all();
+#else
   return !((derived()-derived()).hasNaN());
+#endif
 }
     
 } // end namespace Eigen

extern/Eigen3/Eigen/src/Core/CommaInitializer.h

@@ -22,14 +22,14 @@ namespace Eigen {
   * the return type of MatrixBase::operator<<, and most of the time this is the only
   * way it is used.
   *
-  * \sa \ref MatrixBaseCommaInitRef "MatrixBase::operator<<", CommaInitializer::finished()
+  * \sa \blank \ref MatrixBaseCommaInitRef "MatrixBase::operator<<", CommaInitializer::finished()
   */
 template<typename XprType>
 struct CommaInitializer
 {
   typedef typename XprType::Scalar Scalar;
-  typedef typename XprType::Index Index;
 
+  EIGEN_DEVICE_FUNC
   inline CommaInitializer(XprType& xpr, const Scalar& s)
     : m_xpr(xpr), m_row(0), m_col(1), m_currentBlockRows(1)
   {
@@ -37,6 +37,7 @@ struct CommaInitializer
   }
 
   template<typename OtherDerived>
+  EIGEN_DEVICE_FUNC
   inline CommaInitializer(XprType& xpr, const DenseBase<OtherDerived>& other)
     : m_xpr(xpr), m_row(0), m_col(other.cols()), m_currentBlockRows(other.rows())
   {
@@ -46,6 +47,7 @@ struct CommaInitializer
   /* Copy/Move constructor which transfers ownership. This is crucial in 
    * absence of return value optimization to avoid assertions during destruction. */
   // FIXME in C++11 mode this could be replaced by a proper RValue constructor
+  EIGEN_DEVICE_FUNC
   inline CommaInitializer(const CommaInitializer& o)
   : m_xpr(o.m_xpr), m_row(o.m_row), m_col(o.m_col), m_currentBlockRows(o.m_currentBlockRows) {
     // Mark original object as finished. In absence of R-value references we need to const_cast:
@@ -55,6 +57,7 @@ struct CommaInitializer
   }
 
   /* inserts a scalar value in the target matrix */
+  EIGEN_DEVICE_FUNC
   CommaInitializer& operator,(const Scalar& s)
   {
     if (m_col==m_xpr.cols())
@@ -74,11 +77,10 @@ struct CommaInitializer
 
   /* inserts a matrix expression in the target matrix */
   template<typename OtherDerived>
+  EIGEN_DEVICE_FUNC
   CommaInitializer& operator,(const DenseBase<OtherDerived>& other)
   {
-    if(other.cols()==0 || other.rows()==0)
-      return *this;
-    if (m_col==m_xpr.cols())
+    if (m_col==m_xpr.cols() && (other.cols()!=0 || other.rows()!=m_currentBlockRows))
     {
       m_row+=m_currentBlockRows;
       m_col = 0;
@@ -86,24 +88,22 @@ struct CommaInitializer
       eigen_assert(m_row+m_currentBlockRows<=m_xpr.rows()
         && "Too many rows passed to comma initializer (operator<<)");
     }
-    eigen_assert(m_col<m_xpr.cols()
+    eigen_assert((m_col + other.cols() <= m_xpr.cols())
       && "Too many coefficients passed to comma initializer (operator<<)");
     eigen_assert(m_currentBlockRows==other.rows());
-    if (OtherDerived::SizeAtCompileTime != Dynamic)
-      m_xpr.template block<OtherDerived::RowsAtCompileTime != Dynamic ? OtherDerived::RowsAtCompileTime : 1,
-                              OtherDerived::ColsAtCompileTime != Dynamic ? OtherDerived::ColsAtCompileTime : 1>
-                    (m_row, m_col) = other;
-    else
-      m_xpr.block(m_row, m_col, other.rows(), other.cols()) = other;
+    m_xpr.template block<OtherDerived::RowsAtCompileTime, OtherDerived::ColsAtCompileTime>
+                    (m_row, m_col, other.rows(), other.cols()) = other;
     m_col += other.cols();
     return *this;
   }
 
+  EIGEN_DEVICE_FUNC
   inline ~CommaInitializer()
+#if defined VERIFY_RAISES_ASSERT && (!defined EIGEN_NO_ASSERTION_CHECKING) && defined EIGEN_EXCEPTIONS
+  EIGEN_EXCEPTION_SPEC(Eigen::eigen_assert_exception)
+#endif
   {
-    eigen_assert((m_row+m_currentBlockRows) == m_xpr.rows()
-         && m_col == m_xpr.cols()
-         && "Too few coefficients passed to comma initializer (operator<<)");
+      finished();
   }
 
   /** \returns the built matrix once all its coefficients have been set.
@@ -113,9 +113,15 @@ struct CommaInitializer
     * quaternion.fromRotationMatrix((Matrix3f() << axis0, axis1, axis2).finished());
     * \endcode
     */
-  inline XprType& finished() { return m_xpr; }
+  EIGEN_DEVICE_FUNC
+  inline XprType& finished() {
+      eigen_assert(((m_row+m_currentBlockRows) == m_xpr.rows() || m_xpr.cols() == 0)
+           && m_col == m_xpr.cols()
+           && "Too few coefficients passed to comma initializer (operator<<)");
+      return m_xpr;
+  }
 
-  XprType& m_xpr;   // target expression
+  XprType& m_xpr;           // target expression
   Index m_row;              // current row id
   Index m_col;              // current col id
   Index m_currentBlockRows; // current block height

extern/Eigen3/Eigen/src/Core/ConditionEstimator.h

@@ -0,0 +1,175 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// Copyright (C) 2016 Rasmus Munk Larsen (rmlarsen@google.com)
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
+#ifndef EIGEN_CONDITIONESTIMATOR_H
+#define EIGEN_CONDITIONESTIMATOR_H
+
+namespace Eigen {
+
+namespace internal {
+
+template <typename Vector, typename RealVector, bool IsComplex>
+struct rcond_compute_sign {
+  static inline Vector run(const Vector& v) {
+    const RealVector v_abs = v.cwiseAbs();
+    return (v_abs.array() == static_cast<typename Vector::RealScalar>(0))
+            .select(Vector::Ones(v.size()), v.cwiseQuotient(v_abs));
+  }
+};
+
+// Partial specialization to avoid elementwise division for real vectors.
+template <typename Vector>
+struct rcond_compute_sign<Vector, Vector, false> {
+  static inline Vector run(const Vector& v) {
+    return (v.array() < static_cast<typename Vector::RealScalar>(0))
+           .select(-Vector::Ones(v.size()), Vector::Ones(v.size()));
+  }
+};
+
+/**
+  * \returns an estimate of ||inv(matrix)||_1 given a decomposition of
+  * \a matrix that implements .solve() and .adjoint().solve() methods.
+  *
+  * This function implements Algorithms 4.1 and 5.1 from
+  *   http://www.maths.manchester.ac.uk/~higham/narep/narep135.pdf
+  * which also forms the basis for the condition number estimators in
+  * LAPACK. Since at most 10 calls to the solve method of dec are
+  * performed, the total cost is O(dims^2), as opposed to O(dims^3)
+  * needed to compute the inverse matrix explicitly.
+  *
+  * The most common usage is in estimating the condition number
+  * ||matrix||_1 * ||inv(matrix)||_1. The first term ||matrix||_1 can be
+  * computed directly in O(n^2) operations.
+  *
+  * Supports the following decompositions: FullPivLU, PartialPivLU, LDLT, and
+  * LLT.
+  *
+  * \sa FullPivLU, PartialPivLU, LDLT, LLT.
+  */
+template <typename Decomposition>
+typename Decomposition::RealScalar rcond_invmatrix_L1_norm_estimate(const Decomposition& dec)
+{
+  typedef typename Decomposition::MatrixType MatrixType;
+  typedef typename Decomposition::Scalar Scalar;
+  typedef typename Decomposition::RealScalar RealScalar;
+  typedef typename internal::plain_col_type<MatrixType>::type Vector;
+  typedef typename internal::plain_col_type<MatrixType, RealScalar>::type RealVector;
+  const bool is_complex = (NumTraits<Scalar>::IsComplex != 0);
+
+  eigen_assert(dec.rows() == dec.cols());
+  const Index n = dec.rows();
+  if (n == 0)
+    return 0;
+
+  // Disable Index to float conversion warning
+#ifdef __INTEL_COMPILER
+  #pragma warning push
+  #pragma warning ( disable : 2259 )
+#endif
+  Vector v = dec.solve(Vector::Ones(n) / Scalar(n));
+#ifdef __INTEL_COMPILER
+  #pragma warning pop
+#endif
+
+  // lower_bound is a lower bound on
+  //   ||inv(matrix)||_1  = sup_v ||inv(matrix) v||_1 / ||v||_1
+  // and is the objective maximized by the ("super-") gradient ascent
+  // algorithm below.
+  RealScalar lower_bound = v.template lpNorm<1>();
+  if (n == 1)
+    return lower_bound;
+
+  // Gradient ascent algorithm follows: We know that the optimum is achieved at
+  // one of the simplices v = e_i, so in each iteration we follow a
+  // super-gradient to move towards the optimal one.
+  RealScalar old_lower_bound = lower_bound;
+  Vector sign_vector(n);
+  Vector old_sign_vector;
+  Index v_max_abs_index = -1;
+  Index old_v_max_abs_index = v_max_abs_index;
+  for (int k = 0; k < 4; ++k)
+  {
+    sign_vector = internal::rcond_compute_sign<Vector, RealVector, is_complex>::run(v);
+    if (k > 0 && !is_complex && sign_vector == old_sign_vector) {
+      // Break if the solution stagnated.
+      break;
+    }
+    // v_max_abs_index = argmax |real( inv(matrix)^T * sign_vector )|
+    v = dec.adjoint().solve(sign_vector);
+    v.real().cwiseAbs().maxCoeff(&v_max_abs_index);
+    if (v_max_abs_index == old_v_max_abs_index) {
+      // Break if the solution stagnated.
+      break;
+    }
+    // Move to the new simplex e_j, where j = v_max_abs_index.
+    v = dec.solve(Vector::Unit(n, v_max_abs_index));  // v = inv(matrix) * e_j.
+    lower_bound = v.template lpNorm<1>();
+    if (lower_bound <= old_lower_bound) {
+      // Break if the gradient step did not increase the lower_bound.
+      break;
+    }
+    if (!is_complex) {
+      old_sign_vector = sign_vector;
+    }
+    old_v_max_abs_index = v_max_abs_index;
+    old_lower_bound = lower_bound;
+  }
+  // The following calculates an independent estimate of ||matrix||_1 by
+  // multiplying matrix by a vector with entries of slowly increasing
+  // magnitude and alternating sign:
+  //   v_i = (-1)^{i} (1 + (i / (dim-1))), i = 0,...,dim-1.
+  // This improvement to Hager's algorithm above is due to Higham. It was
+  // added to make the algorithm more robust in certain corner cases where
+  // large elements in the matrix might otherwise escape detection due to
+  // exact cancellation (especially when op and op_adjoint correspond to a
+  // sequence of backsubstitutions and permutations), which could cause
+  // Hager's algorithm to vastly underestimate ||matrix||_1.
+  Scalar alternating_sign(RealScalar(1));
+  for (Index i = 0; i < n; ++i) {
+    // The static_cast is needed when Scalar is a complex and RealScalar implements expression templates
+    v[i] = alternating_sign * static_cast<RealScalar>(RealScalar(1) + (RealScalar(i) / (RealScalar(n - 1))));
+    alternating_sign = -alternating_sign;
+  }
+  v = dec.solve(v);
+  const RealScalar alternate_lower_bound = (2 * v.template lpNorm<1>()) / (3 * RealScalar(n));
+  return numext::maxi(lower_bound, alternate_lower_bound);
+}
+
+/** \brief Reciprocal condition number estimator.
+  *
+  * Computing a decomposition of a dense matrix takes O(n^3) operations, while
+  * this method estimates the condition number quickly and reliably in O(n^2)
+  * operations.
+  *
+  * \returns an estimate of the reciprocal condition number
+  * (1 / (||matrix||_1 * ||inv(matrix)||_1)) of matrix, given ||matrix||_1 and
+  * its decomposition. Supports the following decompositions: FullPivLU,
+  * PartialPivLU, LDLT, and LLT.
+  *
+  * \sa FullPivLU, PartialPivLU, LDLT, LLT.
+  */
+template <typename Decomposition>
+typename Decomposition::RealScalar
+rcond_estimate_helper(typename Decomposition::RealScalar matrix_norm, const Decomposition& dec)
+{
+  typedef typename Decomposition::RealScalar RealScalar;
+  eigen_assert(dec.rows() == dec.cols());
+  if (dec.rows() == 0)              return NumTraits<RealScalar>::infinity();
+  if (matrix_norm == RealScalar(0)) return RealScalar(0);
+  if (dec.rows() == 1)              return RealScalar(1);
+  const RealScalar inverse_matrix_norm = rcond_invmatrix_L1_norm_estimate(dec);
+  return (inverse_matrix_norm == RealScalar(0) ? RealScalar(0)
+                                               : (RealScalar(1) / inverse_matrix_norm) / matrix_norm);
+}
+
+}  // namespace internal
+
+}  // namespace Eigen
+
+#endif

extern/Eigen3/Eigen/src/Core/CoreIterators.h

@@ -1,7 +1,7 @@
 // This file is part of Eigen, a lightweight C++ template library
 // for linear algebra.
 //
-// Copyright (C) 2008-2010 Gael Guennebaud <gael.guennebaud@inria.fr>
+// Copyright (C) 2008-2014 Gael Guennebaud <gael.guennebaud@inria.fr>
 //
 // This Source Code Form is subject to the terms of the Mozilla
 // Public License v. 2.0. If a copy of the MPL was not distributed
@@ -15,47 +15,113 @@ namespace Eigen {
 /* This file contains the respective InnerIterator definition of the expressions defined in Eigen/Core
  */
 
-/** \ingroup SparseCore_Module
-  * \class InnerIterator
-  * \brief An InnerIterator allows to loop over the element of a sparse (or dense) matrix or expression
-  *
-  * todo
+namespace internal {
+
+template<typename XprType, typename EvaluatorKind>
+class inner_iterator_selector;
+
+}
+
+/** \class InnerIterator
+  * \brief An InnerIterator allows to loop over the element of any matrix expression.
+  * 
+  * \warning To be used with care because an evaluator is constructed every time an InnerIterator iterator is constructed.
+  * 
+  * TODO: add a usage example
   */
-
-// generic version for dense matrix and expressions
-template<typename Derived> class DenseBase<Derived>::InnerIterator
+template<typename XprType>
+class InnerIterator
 {
-  protected:
-    typedef typename Derived::Scalar Scalar;
-    typedef typename Derived::Index Index;
-
-    enum { IsRowMajor = (Derived::Flags&RowMajorBit)==RowMajorBit };
-  public:
-    EIGEN_STRONG_INLINE InnerIterator(const Derived& expr, Index outer)
-      : m_expression(expr), m_inner(0), m_outer(outer), m_end(expr.innerSize())
-    {}
-
-    EIGEN_STRONG_INLINE Scalar value() const
-    {
-      return (IsRowMajor) ? m_expression.coeff(m_outer, m_inner)
-                          : m_expression.coeff(m_inner, m_outer);
-    }
-
-    EIGEN_STRONG_INLINE InnerIterator& operator++() { m_inner++; return *this; }
-
-    EIGEN_STRONG_INLINE Index index() const { return m_inner; }
-    inline Index row() const { return IsRowMajor ? m_outer : index(); }
-    inline Index col() const { return IsRowMajor ? index() : m_outer; }
-
-    EIGEN_STRONG_INLINE operator bool() const { return m_inner < m_end && m_inner>=0; }
-
-  protected:
-    const Derived& m_expression;
-    Index m_inner;
-    const Index m_outer;
-    const Index m_end;
+protected:
+  typedef internal::inner_iterator_selector<XprType, typename internal::evaluator_traits<XprType>::Kind> IteratorType;
+  typedef internal::evaluator<XprType> EvaluatorType;
+  typedef typename internal::traits<XprType>::Scalar Scalar;
+public:
+  /** Construct an iterator over the \a outerId -th row or column of \a xpr */
+  InnerIterator(const XprType &xpr, const Index &outerId)
+    : m_eval(xpr), m_iter(m_eval, outerId, xpr.innerSize())
+  {}
+  
+  /// \returns the value of the current coefficient.
+  EIGEN_STRONG_INLINE Scalar value() const          { return m_iter.value(); }
+  /** Increment the iterator \c *this to the next non-zero coefficient.
+    * Explicit zeros are not skipped over. To skip explicit zeros, see class SparseView
+    */
+  EIGEN_STRONG_INLINE InnerIterator& operator++()   { m_iter.operator++(); return *this; }
+  /// \returns the column or row index of the current coefficient.
+  EIGEN_STRONG_INLINE Index index() const           { return m_iter.index(); }
+  /// \returns the row index of the current coefficient.
+  EIGEN_STRONG_INLINE Index row() const             { return m_iter.row(); }
+  /// \returns the column index of the current coefficient.
+  EIGEN_STRONG_INLINE Index col() const             { return m_iter.col(); }
+  /// \returns \c true if the iterator \c *this still references a valid coefficient.
+  EIGEN_STRONG_INLINE operator bool() const         { return m_iter; }
+  
+protected:
+  EvaluatorType m_eval;
+  IteratorType m_iter;
+private:
+  // If you get here, then you're not using the right InnerIterator type, e.g.:
+  //   SparseMatrix<double,RowMajor> A;
+  //   SparseMatrix<double>::InnerIterator it(A,0);
+  template<typename T> InnerIterator(const EigenBase<T>&,Index outer);
 };
 
+namespace internal {
+
+// Generic inner iterator implementation for dense objects
+template<typename XprType>
+class inner_iterator_selector<XprType, IndexBased>
+{
+protected:
+  typedef evaluator<XprType> EvaluatorType;
+  typedef typename traits<XprType>::Scalar Scalar;
+  enum { IsRowMajor = (XprType::Flags&RowMajorBit)==RowMajorBit };
+  
+public:
+  EIGEN_STRONG_INLINE inner_iterator_selector(const EvaluatorType &eval, const Index &outerId, const Index &innerSize)
+    : m_eval(eval), m_inner(0), m_outer(outerId), m_end(innerSize)
+  {}
+
+  EIGEN_STRONG_INLINE Scalar value() const
+  {
+    return (IsRowMajor) ? m_eval.coeff(m_outer, m_inner)
+                        : m_eval.coeff(m_inner, m_outer);
+  }
+
+  EIGEN_STRONG_INLINE inner_iterator_selector& operator++() { m_inner++; return *this; }
+
+  EIGEN_STRONG_INLINE Index index() const { return m_inner; }
+  inline Index row() const { return IsRowMajor ? m_outer : index(); }
+  inline Index col() const { return IsRowMajor ? index() : m_outer; }
+
+  EIGEN_STRONG_INLINE operator bool() const { return m_inner < m_end && m_inner>=0; }
+
+protected:
+  const EvaluatorType& m_eval;
+  Index m_inner;
+  const Index m_outer;
+  const Index m_end;
+};
+
+// For iterator-based evaluator, inner-iterator is already implemented as
+// evaluator<>::InnerIterator
+template<typename XprType>
+class inner_iterator_selector<XprType, IteratorBased>
+ : public evaluator<XprType>::InnerIterator
+{
+protected:
+  typedef typename evaluator<XprType>::InnerIterator Base;
+  typedef evaluator<XprType> EvaluatorType;
+  
+public:
+  EIGEN_STRONG_INLINE inner_iterator_selector(const EvaluatorType &eval, const Index &outerId, const Index &/*innerSize*/)
+    : Base(eval, outerId)
+  {}  
+};
+
+} // end namespace internal
+
 } // end namespace Eigen
 
 #endif // EIGEN_COREITERATORS_H

extern/Eigen3/Eigen/src/Core/CwiseBinaryOp.h

@@ -1,7 +1,7 @@
 // This file is part of Eigen, a lightweight C++ template library
 // for linear algebra.
 //
-// Copyright (C) 2008-2009 Gael Guennebaud <gael.guennebaud@inria.fr>
+// Copyright (C) 2008-2014 Gael Guennebaud <gael.guennebaud@inria.fr>
 // Copyright (C) 2006-2008 Benoit Jacob <jacob.benoit.1@gmail.com>
 //
 // This Source Code Form is subject to the terms of the Mozilla
@@ -13,26 +13,6 @@
 
 namespace Eigen {
 
-/** \class CwiseBinaryOp
-  * \ingroup Core_Module
-  *
-  * \brief Generic expression where a coefficient-wise binary operator is applied to two expressions
-  *
-  * \param BinaryOp template functor implementing the operator
-  * \param Lhs the type of the left-hand side
-  * \param Rhs the type of the right-hand side
-  *
-  * This class represents an expression  where a coefficient-wise binary operator is applied to two expressions.
-  * It is the return type of binary operators, by which we mean only those binary operators where
-  * both the left-hand side and the right-hand side are Eigen expressions.
-  * For example, the return type of matrix1+matrix2 is a CwiseBinaryOp.
-  *
-  * Most of the time, this is the only way that it is used, so you typically don't have to name
-  * CwiseBinaryOp types explicitly.
-  *
-  * \sa MatrixBase::binaryExpr(const MatrixBase<OtherDerived> &,const CustomBinaryOp &) const, class CwiseUnaryOp, class CwiseNullaryOp
-  */
-
 namespace internal {
 template<typename BinaryOp, typename Lhs, typename Rhs>
 struct traits<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >
@@ -52,77 +32,75 @@ struct traits<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >
   // we still want to handle the case when the result type is different.
   typedef typename result_of<
                      BinaryOp(
-                       typename Lhs::Scalar,
-                       typename Rhs::Scalar
+                       const typename Lhs::Scalar&,
+                       const typename Rhs::Scalar&
                      )
                    >::type Scalar;
-  typedef typename promote_storage_type<typename traits<Lhs>::StorageKind,
-                                           typename traits<Rhs>::StorageKind>::ret StorageKind;
-  typedef typename promote_index_type<typename traits<Lhs>::Index,
-                                         typename traits<Rhs>::Index>::type Index;
+  typedef typename cwise_promote_storage_type<typename traits<Lhs>::StorageKind,
+                                              typename traits<Rhs>::StorageKind,
+                                              BinaryOp>::ret StorageKind;
+  typedef typename promote_index_type<typename traits<Lhs>::StorageIndex,
+                                      typename traits<Rhs>::StorageIndex>::type StorageIndex;
   typedef typename Lhs::Nested LhsNested;
   typedef typename Rhs::Nested RhsNested;
   typedef typename remove_reference<LhsNested>::type _LhsNested;
   typedef typename remove_reference<RhsNested>::type _RhsNested;
   enum {
-    LhsCoeffReadCost = _LhsNested::CoeffReadCost,
-    RhsCoeffReadCost = _RhsNested::CoeffReadCost,
-    LhsFlags = _LhsNested::Flags,
-    RhsFlags = _RhsNested::Flags,
-    SameType = is_same<typename _LhsNested::Scalar,typename _RhsNested::Scalar>::value,
-    StorageOrdersAgree = (int(Lhs::Flags)&RowMajorBit)==(int(Rhs::Flags)&RowMajorBit),
-    Flags0 = (int(LhsFlags) | int(RhsFlags)) & (
-        HereditaryBits
-      | (int(LhsFlags) & int(RhsFlags) &
-           ( AlignedBit
-           | (StorageOrdersAgree ? LinearAccessBit : 0)
-           | (functor_traits<BinaryOp>::PacketAccess && StorageOrdersAgree && SameType ? PacketAccessBit : 0)
-           )
-        )
-     ),
-    Flags = (Flags0 & ~RowMajorBit) | (LhsFlags & RowMajorBit),
-    Cost0 = EIGEN_ADD_COST(LhsCoeffReadCost,RhsCoeffReadCost),
-    CoeffReadCost = EIGEN_ADD_COST(Cost0,functor_traits<BinaryOp>::Cost)
+    Flags = cwise_promote_storage_order<typename traits<Lhs>::StorageKind,typename traits<Rhs>::StorageKind,_LhsNested::Flags & RowMajorBit,_RhsNested::Flags & RowMajorBit>::value
   };
 };
 } // end namespace internal
 
-// we require Lhs and Rhs to have the same scalar type. Currently there is no example of a binary functor
-// that would take two operands of different types. If there were such an example, then this check should be
-// moved to the BinaryOp functors, on a per-case basis. This would however require a change in the BinaryOp functors, as
-// currently they take only one typename Scalar template parameter.
-// It is tempting to always allow mixing different types but remember that this is often impossible in the vectorized paths.
-// So allowing mixing different types gives very unexpected errors when enabling vectorization, when the user tries to
-// add together a float matrix and a double matrix.
-#define EIGEN_CHECK_BINARY_COMPATIBILIY(BINOP,LHS,RHS) \
-  EIGEN_STATIC_ASSERT((internal::functor_is_product_like<BINOP>::ret \
-                        ? int(internal::scalar_product_traits<LHS, RHS>::Defined) \
-                        : int(internal::is_same<LHS, RHS>::value)), \
-    YOU_MIXED_DIFFERENT_NUMERIC_TYPES__YOU_NEED_TO_USE_THE_CAST_METHOD_OF_MATRIXBASE_TO_CAST_NUMERIC_TYPES_EXPLICITLY)
-
 template<typename BinaryOp, typename Lhs, typename Rhs, typename StorageKind>
 class CwiseBinaryOpImpl;
 
-template<typename BinaryOp, typename Lhs, typename Rhs>
-class CwiseBinaryOp : internal::no_assignment_operator,
+/** \class CwiseBinaryOp
+  * \ingroup Core_Module
+  *
+  * \brief Generic expression where a coefficient-wise binary operator is applied to two expressions
+  *
+  * \tparam BinaryOp template functor implementing the operator
+  * \tparam LhsType the type of the left-hand side
+  * \tparam RhsType the type of the right-hand side
+  *
+  * This class represents an expression  where a coefficient-wise binary operator is applied to two expressions.
+  * It is the return type of binary operators, by which we mean only those binary operators where
+  * both the left-hand side and the right-hand side are Eigen expressions.
+  * For example, the return type of matrix1+matrix2 is a CwiseBinaryOp.
+  *
+  * Most of the time, this is the only way that it is used, so you typically don't have to name
+  * CwiseBinaryOp types explicitly.
+  *
+  * \sa MatrixBase::binaryExpr(const MatrixBase<OtherDerived> &,const CustomBinaryOp &) const, class CwiseUnaryOp, class CwiseNullaryOp
+  */
+template<typename BinaryOp, typename LhsType, typename RhsType>
+class CwiseBinaryOp : 
   public CwiseBinaryOpImpl<
-          BinaryOp, Lhs, Rhs,
-          typename internal::promote_storage_type<typename internal::traits<Lhs>::StorageKind,
-                                           typename internal::traits<Rhs>::StorageKind>::ret>
+          BinaryOp, LhsType, RhsType,
+          typename internal::cwise_promote_storage_type<typename internal::traits<LhsType>::StorageKind,
+                                                        typename internal::traits<RhsType>::StorageKind,
+                                                        BinaryOp>::ret>,
+  internal::no_assignment_operator
 {
   public:
+    
+    typedef typename internal::remove_all<BinaryOp>::type Functor;
+    typedef typename internal::remove_all<LhsType>::type Lhs;
+    typedef typename internal::remove_all<RhsType>::type Rhs;
 
     typedef typename CwiseBinaryOpImpl<
-        BinaryOp, Lhs, Rhs,
-        typename internal::promote_storage_type<typename internal::traits<Lhs>::StorageKind,
-                                         typename internal::traits<Rhs>::StorageKind>::ret>::Base Base;
+        BinaryOp, LhsType, RhsType,
+        typename internal::cwise_promote_storage_type<typename internal::traits<LhsType>::StorageKind,
+                                                      typename internal::traits<Rhs>::StorageKind,
+                                                      BinaryOp>::ret>::Base Base;
     EIGEN_GENERIC_PUBLIC_INTERFACE(CwiseBinaryOp)
 
-    typedef typename internal::nested<Lhs>::type LhsNested;
-    typedef typename internal::nested<Rhs>::type RhsNested;
+    typedef typename internal::ref_selector<LhsType>::type LhsNested;
+    typedef typename internal::ref_selector<RhsType>::type RhsNested;
     typedef typename internal::remove_reference<LhsNested>::type _LhsNested;
     typedef typename internal::remove_reference<RhsNested>::type _RhsNested;
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE CwiseBinaryOp(const Lhs& aLhs, const Rhs& aRhs, const BinaryOp& func = BinaryOp())
       : m_lhs(aLhs), m_rhs(aRhs), m_functor(func)
     {
@@ -132,6 +110,7 @@ class CwiseBinaryOp : internal::no_assignment_operator,
       eigen_assert(aLhs.rows() == aRhs.rows() && aLhs.cols() == aRhs.cols());
     }
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Index rows() const {
       // return the fixed size type if available to enable compile time optimizations
       if (internal::traits<typename internal::remove_all<LhsNested>::type>::RowsAtCompileTime==Dynamic)
@@ -139,6 +118,7 @@ class CwiseBinaryOp : internal::no_assignment_operator,
       else
         return m_lhs.rows();
     }
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Index cols() const {
       // return the fixed size type if available to enable compile time optimizations
       if (internal::traits<typename internal::remove_all<LhsNested>::type>::ColsAtCompileTime==Dynamic)
@@ -148,10 +128,13 @@ class CwiseBinaryOp : internal::no_assignment_operator,
     }
 
     /** \returns the left hand side nested expression */
+    EIGEN_DEVICE_FUNC
     const _LhsNested& lhs() const { return m_lhs; }
     /** \returns the right hand side nested expression */
+    EIGEN_DEVICE_FUNC
     const _RhsNested& rhs() const { return m_rhs; }
     /** \returns the functor representing the binary operation */
+    EIGEN_DEVICE_FUNC
     const BinaryOp& functor() const { return m_functor; }
 
   protected:
@@ -160,41 +143,13 @@ class CwiseBinaryOp : internal::no_assignment_operator,
     const BinaryOp m_functor;
 };
 
-template<typename BinaryOp, typename Lhs, typename Rhs>
-class CwiseBinaryOpImpl<BinaryOp, Lhs, Rhs, Dense>
-  : public internal::dense_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
+// Generic API dispatcher
+template<typename BinaryOp, typename Lhs, typename Rhs, typename StorageKind>
+class CwiseBinaryOpImpl
+  : public internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type
 {
-    typedef CwiseBinaryOp<BinaryOp, Lhs, Rhs> Derived;
-  public:
-
-    typedef typename internal::dense_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type Base;
-    EIGEN_DENSE_PUBLIC_INTERFACE( Derived )
-
-    EIGEN_STRONG_INLINE const Scalar coeff(Index rowId, Index colId) const
-    {
-      return derived().functor()(derived().lhs().coeff(rowId, colId),
-                                 derived().rhs().coeff(rowId, colId));
-    }
-
-    template<int LoadMode>
-    EIGEN_STRONG_INLINE PacketScalar packet(Index rowId, Index colId) const
-    {
-      return derived().functor().packetOp(derived().lhs().template packet<LoadMode>(rowId, colId),
-                                          derived().rhs().template packet<LoadMode>(rowId, colId));
-    }
-
-    EIGEN_STRONG_INLINE const Scalar coeff(Index index) const
-    {
-      return derived().functor()(derived().lhs().coeff(index),
-                                 derived().rhs().coeff(index));
-    }
-
-    template<int LoadMode>
-    EIGEN_STRONG_INLINE PacketScalar packet(Index index) const
-    {
-      return derived().functor().packetOp(derived().lhs().template packet<LoadMode>(index),
-                                          derived().rhs().template packet<LoadMode>(index));
-    }
+public:
+  typedef typename internal::generic_xpr_base<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::type Base;
 };
 
 /** replaces \c *this by \c *this - \a other.
@@ -206,8 +161,7 @@ template<typename OtherDerived>
 EIGEN_STRONG_INLINE Derived &
 MatrixBase<Derived>::operator-=(const MatrixBase<OtherDerived> &other)
 {
-  SelfCwiseBinaryOp<internal::scalar_difference_op<Scalar>, Derived, OtherDerived> tmp(derived());
-  tmp = other.derived();
+  call_assignment(derived(), other.derived(), internal::sub_assign_op<Scalar,typename OtherDerived::Scalar>());
   return derived();
 }
 
@@ -220,11 +174,11 @@ template<typename OtherDerived>
 EIGEN_STRONG_INLINE Derived &
 MatrixBase<Derived>::operator+=(const MatrixBase<OtherDerived>& other)
 {
-  SelfCwiseBinaryOp<internal::scalar_sum_op<Scalar>, Derived, OtherDerived> tmp(derived());
-  tmp = other.derived();
+  call_assignment(derived(), other.derived(), internal::add_assign_op<Scalar,typename OtherDerived::Scalar>());
   return derived();
 }
 
 } // end namespace Eigen
 
 #endif // EIGEN_CWISE_BINARY_OP_H
+

extern/Eigen3/Eigen/src/Core/CwiseNullaryOp.h

@@ -12,13 +12,24 @@
 
 namespace Eigen {
 
+namespace internal {
+template<typename NullaryOp, typename PlainObjectType>
+struct traits<CwiseNullaryOp<NullaryOp, PlainObjectType> > : traits<PlainObjectType>
+{
+  enum {
+    Flags = traits<PlainObjectType>::Flags & RowMajorBit
+  };
+};
+
+} // namespace internal
+
 /** \class CwiseNullaryOp
   * \ingroup Core_Module
   *
   * \brief Generic expression of a matrix where all coefficients are defined by a functor
   *
-  * \param NullaryOp template functor implementing the operator
-  * \param PlainObjectType the underlying plain matrix/array type
+  * \tparam NullaryOp template functor implementing the operator
+  * \tparam PlainObjectType the underlying plain matrix/array type
   *
   * This class represents an expression of a generic nullary operator.
   * It is the return type of the Ones(), Zero(), Constant(), Identity() and Random() methods,
@@ -27,68 +38,49 @@ namespace Eigen {
   * However, if you want to write a function returning such an expression, you
   * will need to use this class.
   *
-  * \sa class CwiseUnaryOp, class CwiseBinaryOp, DenseBase::NullaryExpr()
+  * The functor NullaryOp must expose one of the following method:
+    <table class="manual">
+    <tr            ><td>\c operator()() </td><td>if the procedural generation does not depend on the coefficient entries (e.g., random numbers)</td></tr>
+    <tr class="alt"><td>\c operator()(Index i)</td><td>if the procedural generation makes sense for vectors only and that it depends on the coefficient index \c i (e.g., linspace) </td></tr>
+    <tr            ><td>\c operator()(Index i,Index j)</td><td>if the procedural generation depends on the matrix coordinates \c i, \c j (e.g., to generate a checkerboard with 0 and 1)</td></tr>
+    </table>
+  * It is also possible to expose the last two operators if the generation makes sense for matrices but can be optimized for vectors.
+  *
+  * See DenseBase::NullaryExpr(Index,const CustomNullaryOp&) for an example binding
+  * C++11 random number generators.
+  *
+  * A nullary expression can also be used to implement custom sophisticated matrix manipulations
+  * that cannot be covered by the existing set of natively supported matrix manipulations.
+  * See this \ref TopicCustomizing_NullaryExpr "page" for some examples and additional explanations
+  * on the behavior of CwiseNullaryOp.
+  *
+  * \sa class CwiseUnaryOp, class CwiseBinaryOp, DenseBase::NullaryExpr
   */
-
-namespace internal {
 template<typename NullaryOp, typename PlainObjectType>
-struct traits<CwiseNullaryOp<NullaryOp, PlainObjectType> > : traits<PlainObjectType>
-{
-  enum {
-    Flags = (traits<PlainObjectType>::Flags
-      & (  HereditaryBits
-         | (functor_has_linear_access<NullaryOp>::ret ? LinearAccessBit : 0)
-         | (functor_traits<NullaryOp>::PacketAccess ? PacketAccessBit : 0)))
-      | (functor_traits<NullaryOp>::IsRepeatable ? 0 : EvalBeforeNestingBit),
-    CoeffReadCost = functor_traits<NullaryOp>::Cost
-  };
-};
-}
-
-template<typename NullaryOp, typename PlainObjectType>
-class CwiseNullaryOp : internal::no_assignment_operator,
-  public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type
+class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
 {
   public:
 
     typedef typename internal::dense_xpr_base<CwiseNullaryOp>::type Base;
     EIGEN_DENSE_PUBLIC_INTERFACE(CwiseNullaryOp)
 
-    CwiseNullaryOp(Index nbRows, Index nbCols, const NullaryOp& func = NullaryOp())
-      : m_rows(nbRows), m_cols(nbCols), m_functor(func)
+    EIGEN_DEVICE_FUNC
+    CwiseNullaryOp(Index rows, Index cols, const NullaryOp& func = NullaryOp())
+      : m_rows(rows), m_cols(cols), m_functor(func)
     {
-      eigen_assert(nbRows >= 0
-            && (RowsAtCompileTime == Dynamic || RowsAtCompileTime == nbRows)
-            &&  nbCols >= 0
-            && (ColsAtCompileTime == Dynamic || ColsAtCompileTime == nbCols));
+      eigen_assert(rows >= 0
+            && (RowsAtCompileTime == Dynamic || RowsAtCompileTime == rows)
+            &&  cols >= 0
+            && (ColsAtCompileTime == Dynamic || ColsAtCompileTime == cols));
     }
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Index rows() const { return m_rows.value(); }
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Index cols() const { return m_cols.value(); }
 
-    EIGEN_STRONG_INLINE const Scalar coeff(Index rowId, Index colId) const
-    {
-      return m_functor(rowId, colId);
-    }
-
-    template<int LoadMode>
-    EIGEN_STRONG_INLINE PacketScalar packet(Index rowId, Index colId) const
-    {
-      return m_functor.packetOp(rowId, colId);
-    }
-
-    EIGEN_STRONG_INLINE const Scalar coeff(Index index) const
-    {
-      return m_functor(index);
-    }
-
-    template<int LoadMode>
-    EIGEN_STRONG_INLINE PacketScalar packet(Index index) const
-    {
-      return m_functor.packetOp(index);
-    }
-
     /** \returns the functor representing the nullary operation */
+    EIGEN_DEVICE_FUNC
     const NullaryOp& functor() const { return m_functor; }
 
   protected:
@@ -113,10 +105,10 @@ class CwiseNullaryOp : internal::no_assignment_operator,
   */
 template<typename Derived>
 template<typename CustomNullaryOp>
-EIGEN_STRONG_INLINE const CwiseNullaryOp<CustomNullaryOp, Derived>
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const CwiseNullaryOp<CustomNullaryOp, typename DenseBase<Derived>::PlainObject>
 DenseBase<Derived>::NullaryExpr(Index rows, Index cols, const CustomNullaryOp& func)
 {
-  return CwiseNullaryOp<CustomNullaryOp, Derived>(rows, cols, func);
+  return CwiseNullaryOp<CustomNullaryOp, PlainObject>(rows, cols, func);
 }
 
 /** \returns an expression of a matrix defined by a custom functor \a func
@@ -132,16 +124,19 @@ DenseBase<Derived>::NullaryExpr(Index rows, Index cols, const CustomNullaryOp& f
   *
   * The template parameter \a CustomNullaryOp is the type of the functor.
   *
+  * Here is an example with C++11 random generators: \include random_cpp11.cpp
+  * Output: \verbinclude random_cpp11.out
+  * 
   * \sa class CwiseNullaryOp
   */
 template<typename Derived>
 template<typename CustomNullaryOp>
-EIGEN_STRONG_INLINE const CwiseNullaryOp<CustomNullaryOp, Derived>
+EIGEN_STRONG_INLINE const CwiseNullaryOp<CustomNullaryOp, typename DenseBase<Derived>::PlainObject>
 DenseBase<Derived>::NullaryExpr(Index size, const CustomNullaryOp& func)
 {
   EIGEN_STATIC_ASSERT_VECTOR_ONLY(Derived)
-  if(RowsAtCompileTime == 1) return CwiseNullaryOp<CustomNullaryOp, Derived>(1, size, func);
-  else return CwiseNullaryOp<CustomNullaryOp, Derived>(size, 1, func);
+  if(RowsAtCompileTime == 1) return CwiseNullaryOp<CustomNullaryOp, PlainObject>(1, size, func);
+  else return CwiseNullaryOp<CustomNullaryOp, PlainObject>(size, 1, func);
 }
 
 /** \returns an expression of a matrix defined by a custom functor \a func
@@ -155,19 +150,19 @@ DenseBase<Derived>::NullaryExpr(Index size, const CustomNullaryOp& func)
   */
 template<typename Derived>
 template<typename CustomNullaryOp>
-EIGEN_STRONG_INLINE const CwiseNullaryOp<CustomNullaryOp, Derived>
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const CwiseNullaryOp<CustomNullaryOp, typename DenseBase<Derived>::PlainObject>
 DenseBase<Derived>::NullaryExpr(const CustomNullaryOp& func)
 {
-  return CwiseNullaryOp<CustomNullaryOp, Derived>(RowsAtCompileTime, ColsAtCompileTime, func);
+  return CwiseNullaryOp<CustomNullaryOp, PlainObject>(RowsAtCompileTime, ColsAtCompileTime, func);
 }
 
 /** \returns an expression of a constant matrix of value \a value
   *
-  * The parameters \a nbRows and \a nbCols are the number of rows and of columns of
+  * The parameters \a rows and \a cols are the number of rows and of columns of
   * the returned matrix. Must be compatible with this DenseBase type.
   *
   * This variant is meant to be used for dynamic-size matrix types. For fixed-size types,
-  * it is redundant to pass \a nbRows and \a nbCols as arguments, so Zero() should be used
+  * it is redundant to pass \a rows and \a cols as arguments, so Zero() should be used
   * instead.
   *
   * The template parameter \a CustomNullaryOp is the type of the functor.
@@ -176,9 +171,9 @@ DenseBase<Derived>::NullaryExpr(const CustomNullaryOp& func)
   */
 template<typename Derived>
 EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
-DenseBase<Derived>::Constant(Index nbRows, Index nbCols, const Scalar& value)
+DenseBase<Derived>::Constant(Index rows, Index cols, const Scalar& value)
 {
-  return DenseBase<Derived>::NullaryExpr(nbRows, nbCols, internal::scalar_constant_op<Scalar>(value));
+  return DenseBase<Derived>::NullaryExpr(rows, cols, internal::scalar_constant_op<Scalar>(value));
 }
 
 /** \returns an expression of a constant matrix of value \a value
@@ -197,7 +192,7 @@ DenseBase<Derived>::Constant(Index nbRows, Index nbCols, const Scalar& value)
   * \sa class CwiseNullaryOp
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
 DenseBase<Derived>::Constant(Index size, const Scalar& value)
 {
   return DenseBase<Derived>::NullaryExpr(size, internal::scalar_constant_op<Scalar>(value));
@@ -213,53 +208,40 @@ DenseBase<Derived>::Constant(Index size, const Scalar& value)
   * \sa class CwiseNullaryOp
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
 DenseBase<Derived>::Constant(const Scalar& value)
 {
   EIGEN_STATIC_ASSERT_FIXED_SIZE(Derived)
   return DenseBase<Derived>::NullaryExpr(RowsAtCompileTime, ColsAtCompileTime, internal::scalar_constant_op<Scalar>(value));
 }
 
-/**
-  * \brief Sets a linearly space vector.
+/** \deprecated because of accuracy loss. In Eigen 3.3, it is an alias for LinSpaced(Index,const Scalar&,const Scalar&)
   *
-  * The function generates 'size' equally spaced values in the closed interval [low,high].
-  * This particular version of LinSpaced() uses sequential access, i.e. vector access is
-  * assumed to be a(0), a(1), ..., a(size). This assumption allows for better vectorization
-  * and yields faster code than the random access version.
-  *
-  * When size is set to 1, a vector of length 1 containing 'high' is returned.
-  *
-  * \only_for_vectors
-  *
-  * Example: \include DenseBase_LinSpaced_seq.cpp
-  * Output: \verbinclude DenseBase_LinSpaced_seq.out
-  *
-  * \sa setLinSpaced(Index,const Scalar&,const Scalar&), LinSpaced(Index,Scalar,Scalar), CwiseNullaryOp
+  * \sa LinSpaced(Index,Scalar,Scalar), setLinSpaced(Index,const Scalar&,const Scalar&)
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename DenseBase<Derived>::SequentialLinSpacedReturnType
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename DenseBase<Derived>::RandomAccessLinSpacedReturnType
 DenseBase<Derived>::LinSpaced(Sequential_t, Index size, const Scalar& low, const Scalar& high)
 {
   EIGEN_STATIC_ASSERT_VECTOR_ONLY(Derived)
-  return DenseBase<Derived>::NullaryExpr(size, internal::linspaced_op<Scalar,false>(low,high,size));
+  return DenseBase<Derived>::NullaryExpr(size, internal::linspaced_op<Scalar,PacketScalar>(low,high,size));
 }
 
-/**
-  * \copydoc DenseBase::LinSpaced(Sequential_t, Index, const Scalar&, const Scalar&)
-  * Special version for fixed size types which does not require the size parameter.
+/** \deprecated because of accuracy loss. In Eigen 3.3, it is an alias for LinSpaced(const Scalar&,const Scalar&)
+  *
+  * \sa LinSpaced(Scalar,Scalar)
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename DenseBase<Derived>::SequentialLinSpacedReturnType
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename DenseBase<Derived>::RandomAccessLinSpacedReturnType
 DenseBase<Derived>::LinSpaced(Sequential_t, const Scalar& low, const Scalar& high)
 {
   EIGEN_STATIC_ASSERT_VECTOR_ONLY(Derived)
   EIGEN_STATIC_ASSERT_FIXED_SIZE(Derived)
-  return DenseBase<Derived>::NullaryExpr(Derived::SizeAtCompileTime, internal::linspaced_op<Scalar,false>(low,high,Derived::SizeAtCompileTime));
+  return DenseBase<Derived>::NullaryExpr(Derived::SizeAtCompileTime, internal::linspaced_op<Scalar,PacketScalar>(low,high,Derived::SizeAtCompileTime));
 }
 
 /**
-  * \brief Sets a linearly space vector.
+  * \brief Sets a linearly spaced vector.
   *
   * The function generates 'size' equally spaced values in the closed interval [low,high].
   * When size is set to 1, a vector of length 1 containing 'high' is returned.
@@ -269,14 +251,24 @@ DenseBase<Derived>::LinSpaced(Sequential_t, const Scalar& low, const Scalar& hig
   * Example: \include DenseBase_LinSpaced.cpp
   * Output: \verbinclude DenseBase_LinSpaced.out
   *
-  * \sa setLinSpaced(Index,const Scalar&,const Scalar&), LinSpaced(Sequential_t,Index,const Scalar&,const Scalar&,Index), CwiseNullaryOp
+  * For integer scalar types, an even spacing is possible if and only if the length of the range,
+  * i.e., \c high-low is a scalar multiple of \c size-1, or if \c size is a scalar multiple of the
+  * number of values \c high-low+1 (meaning each value can be repeated the same number of time).
+  * If one of these two considions is not satisfied, then \c high is lowered to the largest value
+  * satisfying one of this constraint.
+  * Here are some examples:
+  *
+  * Example: \include DenseBase_LinSpacedInt.cpp
+  * Output: \verbinclude DenseBase_LinSpacedInt.out
+  *
+  * \sa setLinSpaced(Index,const Scalar&,const Scalar&), CwiseNullaryOp
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename DenseBase<Derived>::RandomAccessLinSpacedReturnType
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename DenseBase<Derived>::RandomAccessLinSpacedReturnType
 DenseBase<Derived>::LinSpaced(Index size, const Scalar& low, const Scalar& high)
 {
   EIGEN_STATIC_ASSERT_VECTOR_ONLY(Derived)
-  return DenseBase<Derived>::NullaryExpr(size, internal::linspaced_op<Scalar,true>(low,high,size));
+  return DenseBase<Derived>::NullaryExpr(size, internal::linspaced_op<Scalar,PacketScalar>(low,high,size));
 }
 
 /**
@@ -284,22 +276,23 @@ DenseBase<Derived>::LinSpaced(Index size, const Scalar& low, const Scalar& high)
   * Special version for fixed size types which does not require the size parameter.
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename DenseBase<Derived>::RandomAccessLinSpacedReturnType
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename DenseBase<Derived>::RandomAccessLinSpacedReturnType
 DenseBase<Derived>::LinSpaced(const Scalar& low, const Scalar& high)
 {
   EIGEN_STATIC_ASSERT_VECTOR_ONLY(Derived)
   EIGEN_STATIC_ASSERT_FIXED_SIZE(Derived)
-  return DenseBase<Derived>::NullaryExpr(Derived::SizeAtCompileTime, internal::linspaced_op<Scalar,true>(low,high,Derived::SizeAtCompileTime));
+  return DenseBase<Derived>::NullaryExpr(Derived::SizeAtCompileTime, internal::linspaced_op<Scalar,PacketScalar>(low,high,Derived::SizeAtCompileTime));
 }
 
 /** \returns true if all coefficients in this matrix are approximately equal to \a val, to within precision \a prec */
 template<typename Derived>
-bool DenseBase<Derived>::isApproxToConstant
+EIGEN_DEVICE_FUNC bool DenseBase<Derived>::isApproxToConstant
 (const Scalar& val, const RealScalar& prec) const
 {
+  typename internal::nested_eval<Derived,1>::type self(derived());
   for(Index j = 0; j < cols(); ++j)
     for(Index i = 0; i < rows(); ++i)
-      if(!internal::isApprox(this->coeff(i, j), val, prec))
+      if(!internal::isApprox(self.coeff(i, j), val, prec))
         return false;
   return true;
 }
@@ -308,7 +301,7 @@ bool DenseBase<Derived>::isApproxToConstant
   *
   * \returns true if all coefficients in this matrix are approximately equal to \a value, to within precision \a prec */
 template<typename Derived>
-bool DenseBase<Derived>::isConstant
+EIGEN_DEVICE_FUNC bool DenseBase<Derived>::isConstant
 (const Scalar& val, const RealScalar& prec) const
 {
   return isApproxToConstant(val, prec);
@@ -319,22 +312,22 @@ bool DenseBase<Derived>::isConstant
   * \sa setConstant(), Constant(), class CwiseNullaryOp
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE void DenseBase<Derived>::fill(const Scalar& val)
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void DenseBase<Derived>::fill(const Scalar& val)
 {
   setConstant(val);
 }
 
-/** Sets all coefficients in this expression to \a value.
+/** Sets all coefficients in this expression to value \a val.
   *
   * \sa fill(), setConstant(Index,const Scalar&), setConstant(Index,Index,const Scalar&), setZero(), setOnes(), Constant(), class CwiseNullaryOp, setZero(), setOnes()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::setConstant(const Scalar& val)
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::setConstant(const Scalar& val)
 {
   return derived() = Constant(rows(), cols(), val);
 }
 
-/** Resizes to the given \a size, and sets all coefficients in this expression to the given \a value.
+/** Resizes to the given \a size, and sets all coefficients in this expression to the given value \a val.
   *
   * \only_for_vectors
   *
@@ -344,17 +337,17 @@ EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::setConstant(const Scalar& val)
   * \sa MatrixBase::setConstant(const Scalar&), setConstant(Index,Index,const Scalar&), class CwiseNullaryOp, MatrixBase::Constant(const Scalar&)
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE Derived&
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived&
 PlainObjectBase<Derived>::setConstant(Index size, const Scalar& val)
 {
   resize(size);
   return setConstant(val);
 }
 
-/** Resizes to the given size, and sets all coefficients in this expression to the given \a value.
+/** Resizes to the given size, and sets all coefficients in this expression to the given value \a val.
   *
-  * \param nbRows the new number of rows
-  * \param nbCols the new number of columns
+  * \param rows the new number of rows
+  * \param cols the new number of columns
   * \param val the value to which all coefficients are set
   *
   * Example: \include Matrix_setConstant_int_int.cpp
@@ -363,15 +356,15 @@ PlainObjectBase<Derived>::setConstant(Index size, const Scalar& val)
   * \sa MatrixBase::setConstant(const Scalar&), setConstant(Index,const Scalar&), class CwiseNullaryOp, MatrixBase::Constant(const Scalar&)
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE Derived&
-PlainObjectBase<Derived>::setConstant(Index nbRows, Index nbCols, const Scalar& val)
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived&
+PlainObjectBase<Derived>::setConstant(Index rows, Index cols, const Scalar& val)
 {
-  resize(nbRows, nbCols);
+  resize(rows, cols);
   return setConstant(val);
 }
 
 /**
-  * \brief Sets a linearly space vector.
+  * \brief Sets a linearly spaced vector.
   *
   * The function generates 'size' equally spaced values in the closed interval [low,high].
   * When size is set to 1, a vector of length 1 containing 'high' is returned.
@@ -381,27 +374,33 @@ PlainObjectBase<Derived>::setConstant(Index nbRows, Index nbCols, const Scalar&
   * Example: \include DenseBase_setLinSpaced.cpp
   * Output: \verbinclude DenseBase_setLinSpaced.out
   *
-  * \sa CwiseNullaryOp
+  * For integer scalar types, do not miss the explanations on the definition
+  * of \link LinSpaced(Index,const Scalar&,const Scalar&) even spacing \endlink.
+  *
+  * \sa LinSpaced(Index,const Scalar&,const Scalar&), CwiseNullaryOp
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::setLinSpaced(Index newSize, const Scalar& low, const Scalar& high)
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::setLinSpaced(Index newSize, const Scalar& low, const Scalar& high)
 {
   EIGEN_STATIC_ASSERT_VECTOR_ONLY(Derived)
-  return derived() = Derived::NullaryExpr(newSize, internal::linspaced_op<Scalar,false>(low,high,newSize));
+  return derived() = Derived::NullaryExpr(newSize, internal::linspaced_op<Scalar,PacketScalar>(low,high,newSize));
 }
 
 /**
-  * \brief Sets a linearly space vector.
+  * \brief Sets a linearly spaced vector.
   *
-  * The function fill *this with equally spaced values in the closed interval [low,high].
+  * The function fills \c *this with equally spaced values in the closed interval [low,high].
   * When size is set to 1, a vector of length 1 containing 'high' is returned.
   *
   * \only_for_vectors
   *
-  * \sa setLinSpaced(Index, const Scalar&, const Scalar&), CwiseNullaryOp
+  * For integer scalar types, do not miss the explanations on the definition
+  * of \link LinSpaced(Index,const Scalar&,const Scalar&) even spacing \endlink.
+  *
+  * \sa LinSpaced(Index,const Scalar&,const Scalar&), setLinSpaced(Index, const Scalar&, const Scalar&), CwiseNullaryOp
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::setLinSpaced(const Scalar& low, const Scalar& high)
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::setLinSpaced(const Scalar& low, const Scalar& high)
 {
   EIGEN_STATIC_ASSERT_VECTOR_ONLY(Derived)
   return setLinSpaced(size(), low, high);
@@ -424,10 +423,10 @@ EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::setLinSpaced(const Scalar& low,
   * \sa Zero(), Zero(Index)
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
-DenseBase<Derived>::Zero(Index nbRows, Index nbCols)
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
+DenseBase<Derived>::Zero(Index rows, Index cols)
 {
-  return Constant(nbRows, nbCols, Scalar(0));
+  return Constant(rows, cols, Scalar(0));
 }
 
 /** \returns an expression of a zero vector.
@@ -447,7 +446,7 @@ DenseBase<Derived>::Zero(Index nbRows, Index nbCols)
   * \sa Zero(), Zero(Index,Index)
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
 DenseBase<Derived>::Zero(Index size)
 {
   return Constant(size, Scalar(0));
@@ -464,7 +463,7 @@ DenseBase<Derived>::Zero(Index size)
   * \sa Zero(Index), Zero(Index,Index)
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
 DenseBase<Derived>::Zero()
 {
   return Constant(Scalar(0));
@@ -479,11 +478,12 @@ DenseBase<Derived>::Zero()
   * \sa class CwiseNullaryOp, Zero()
   */
 template<typename Derived>
-bool DenseBase<Derived>::isZero(const RealScalar& prec) const
+EIGEN_DEVICE_FUNC bool DenseBase<Derived>::isZero(const RealScalar& prec) const
 {
+  typename internal::nested_eval<Derived,1>::type self(derived());
   for(Index j = 0; j < cols(); ++j)
     for(Index i = 0; i < rows(); ++i)
-      if(!internal::isMuchSmallerThan(this->coeff(i, j), static_cast<Scalar>(1), prec))
+      if(!internal::isMuchSmallerThan(self.coeff(i, j), static_cast<Scalar>(1), prec))
         return false;
   return true;
 }
@@ -496,7 +496,7 @@ bool DenseBase<Derived>::isZero(const RealScalar& prec) const
   * \sa class CwiseNullaryOp, Zero()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::setZero()
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::setZero()
 {
   return setConstant(Scalar(0));
 }
@@ -511,7 +511,7 @@ EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::setZero()
   * \sa DenseBase::setZero(), setZero(Index,Index), class CwiseNullaryOp, DenseBase::Zero()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE Derived&
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived&
 PlainObjectBase<Derived>::setZero(Index newSize)
 {
   resize(newSize);
@@ -520,8 +520,8 @@ PlainObjectBase<Derived>::setZero(Index newSize)
 
 /** Resizes to the given size, and sets all coefficients in this expression to zero.
   *
-  * \param nbRows the new number of rows
-  * \param nbCols the new number of columns
+  * \param rows the new number of rows
+  * \param cols the new number of columns
   *
   * Example: \include Matrix_setZero_int_int.cpp
   * Output: \verbinclude Matrix_setZero_int_int.out
@@ -529,10 +529,10 @@ PlainObjectBase<Derived>::setZero(Index newSize)
   * \sa DenseBase::setZero(), setZero(Index), class CwiseNullaryOp, DenseBase::Zero()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE Derived&
-PlainObjectBase<Derived>::setZero(Index nbRows, Index nbCols)
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived&
+PlainObjectBase<Derived>::setZero(Index rows, Index cols)
 {
-  resize(nbRows, nbCols);
+  resize(rows, cols);
   return setConstant(Scalar(0));
 }
 
@@ -540,7 +540,7 @@ PlainObjectBase<Derived>::setZero(Index nbRows, Index nbCols)
 
 /** \returns an expression of a matrix where all coefficients equal one.
   *
-  * The parameters \a nbRows and \a nbCols are the number of rows and of columns of
+  * The parameters \a rows and \a cols are the number of rows and of columns of
   * the returned matrix. Must be compatible with this MatrixBase type.
   *
   * This variant is meant to be used for dynamic-size matrix types. For fixed-size types,
@@ -553,10 +553,10 @@ PlainObjectBase<Derived>::setZero(Index nbRows, Index nbCols)
   * \sa Ones(), Ones(Index), isOnes(), class Ones
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
-DenseBase<Derived>::Ones(Index nbRows, Index nbCols)
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
+DenseBase<Derived>::Ones(Index rows, Index cols)
 {
-  return Constant(nbRows, nbCols, Scalar(1));
+  return Constant(rows, cols, Scalar(1));
 }
 
 /** \returns an expression of a vector where all coefficients equal one.
@@ -576,7 +576,7 @@ DenseBase<Derived>::Ones(Index nbRows, Index nbCols)
   * \sa Ones(), Ones(Index,Index), isOnes(), class Ones
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
 DenseBase<Derived>::Ones(Index newSize)
 {
   return Constant(newSize, Scalar(1));
@@ -593,7 +593,7 @@ DenseBase<Derived>::Ones(Index newSize)
   * \sa Ones(Index), Ones(Index,Index), isOnes(), class Ones
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename DenseBase<Derived>::ConstantReturnType
 DenseBase<Derived>::Ones()
 {
   return Constant(Scalar(1));
@@ -608,7 +608,7 @@ DenseBase<Derived>::Ones()
   * \sa class CwiseNullaryOp, Ones()
   */
 template<typename Derived>
-bool DenseBase<Derived>::isOnes
+EIGEN_DEVICE_FUNC bool DenseBase<Derived>::isOnes
 (const RealScalar& prec) const
 {
   return isApproxToConstant(Scalar(1), prec);
@@ -622,7 +622,7 @@ bool DenseBase<Derived>::isOnes
   * \sa class CwiseNullaryOp, Ones()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::setOnes()
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::setOnes()
 {
   return setConstant(Scalar(1));
 }
@@ -637,7 +637,7 @@ EIGEN_STRONG_INLINE Derived& DenseBase<Derived>::setOnes()
   * \sa MatrixBase::setOnes(), setOnes(Index,Index), class CwiseNullaryOp, MatrixBase::Ones()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE Derived&
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived&
 PlainObjectBase<Derived>::setOnes(Index newSize)
 {
   resize(newSize);
@@ -646,8 +646,8 @@ PlainObjectBase<Derived>::setOnes(Index newSize)
 
 /** Resizes to the given size, and sets all coefficients in this expression to one.
   *
-  * \param nbRows the new number of rows
-  * \param nbCols the new number of columns
+  * \param rows the new number of rows
+  * \param cols the new number of columns
   *
   * Example: \include Matrix_setOnes_int_int.cpp
   * Output: \verbinclude Matrix_setOnes_int_int.out
@@ -655,10 +655,10 @@ PlainObjectBase<Derived>::setOnes(Index newSize)
   * \sa MatrixBase::setOnes(), setOnes(Index), class CwiseNullaryOp, MatrixBase::Ones()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE Derived&
-PlainObjectBase<Derived>::setOnes(Index nbRows, Index nbCols)
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived&
+PlainObjectBase<Derived>::setOnes(Index rows, Index cols)
 {
-  resize(nbRows, nbCols);
+  resize(rows, cols);
   return setConstant(Scalar(1));
 }
 
@@ -666,7 +666,7 @@ PlainObjectBase<Derived>::setOnes(Index nbRows, Index nbCols)
 
 /** \returns an expression of the identity matrix (not necessarily square).
   *
-  * The parameters \a nbRows and \a nbCols are the number of rows and of columns of
+  * The parameters \a rows and \a cols are the number of rows and of columns of
   * the returned matrix. Must be compatible with this MatrixBase type.
   *
   * This variant is meant to be used for dynamic-size matrix types. For fixed-size types,
@@ -679,10 +679,10 @@ PlainObjectBase<Derived>::setOnes(Index nbRows, Index nbCols)
   * \sa Identity(), setIdentity(), isIdentity()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::IdentityReturnType
-MatrixBase<Derived>::Identity(Index nbRows, Index nbCols)
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::IdentityReturnType
+MatrixBase<Derived>::Identity(Index rows, Index cols)
 {
-  return DenseBase<Derived>::NullaryExpr(nbRows, nbCols, internal::scalar_identity_op<Scalar>());
+  return DenseBase<Derived>::NullaryExpr(rows, cols, internal::scalar_identity_op<Scalar>());
 }
 
 /** \returns an expression of the identity matrix (not necessarily square).
@@ -696,7 +696,7 @@ MatrixBase<Derived>::Identity(Index nbRows, Index nbCols)
   * \sa Identity(Index,Index), setIdentity(), isIdentity()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::IdentityReturnType
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::IdentityReturnType
 MatrixBase<Derived>::Identity()
 {
   EIGEN_STATIC_ASSERT_FIXED_SIZE(Derived)
@@ -716,18 +716,19 @@ template<typename Derived>
 bool MatrixBase<Derived>::isIdentity
 (const RealScalar& prec) const
 {
+  typename internal::nested_eval<Derived,1>::type self(derived());
   for(Index j = 0; j < cols(); ++j)
   {
     for(Index i = 0; i < rows(); ++i)
     {
       if(i == j)
       {
-        if(!internal::isApprox(this->coeff(i, j), static_cast<Scalar>(1), prec))
+        if(!internal::isApprox(self.coeff(i, j), static_cast<Scalar>(1), prec))
           return false;
       }
       else
       {
-        if(!internal::isMuchSmallerThan(this->coeff(i, j), static_cast<RealScalar>(1), prec))
+        if(!internal::isMuchSmallerThan(self.coeff(i, j), static_cast<RealScalar>(1), prec))
           return false;
       }
     }
@@ -740,6 +741,7 @@ namespace internal {
 template<typename Derived, bool Big = (Derived::SizeAtCompileTime>=16)>
 struct setIdentity_impl
 {
+  EIGEN_DEVICE_FUNC
   static EIGEN_STRONG_INLINE Derived& run(Derived& m)
   {
     return m = Derived::Identity(m.rows(), m.cols());
@@ -749,11 +751,11 @@ struct setIdentity_impl
 template<typename Derived>
 struct setIdentity_impl<Derived, true>
 {
-  typedef typename Derived::Index Index;
+  EIGEN_DEVICE_FUNC
   static EIGEN_STRONG_INLINE Derived& run(Derived& m)
   {
     m.setZero();
-    const Index size = (std::min)(m.rows(), m.cols());
+    const Index size = numext::mini(m.rows(), m.cols());
     for(Index i = 0; i < size; ++i) m.coeffRef(i,i) = typename Derived::Scalar(1);
     return m;
   }
@@ -769,15 +771,15 @@ struct setIdentity_impl<Derived, true>
   * \sa class CwiseNullaryOp, Identity(), Identity(Index,Index), isIdentity()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE Derived& MatrixBase<Derived>::setIdentity()
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived& MatrixBase<Derived>::setIdentity()
 {
   return internal::setIdentity_impl<Derived>::run(derived());
 }
 
 /** \brief Resizes to the given size, and writes the identity expression (not necessarily square) into *this.
   *
-  * \param nbRows the new number of rows
-  * \param nbCols the new number of columns
+  * \param rows the new number of rows
+  * \param cols the new number of columns
   *
   * Example: \include Matrix_setIdentity_int_int.cpp
   * Output: \verbinclude Matrix_setIdentity_int_int.out
@@ -785,9 +787,9 @@ EIGEN_STRONG_INLINE Derived& MatrixBase<Derived>::setIdentity()
   * \sa MatrixBase::setIdentity(), class CwiseNullaryOp, MatrixBase::Identity()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE Derived& MatrixBase<Derived>::setIdentity(Index nbRows, Index nbCols)
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Derived& MatrixBase<Derived>::setIdentity(Index rows, Index cols)
 {
-  derived().resize(nbRows, nbCols);
+  derived().resize(rows, cols);
   return setIdentity();
 }
 
@@ -798,7 +800,7 @@ EIGEN_STRONG_INLINE Derived& MatrixBase<Derived>::setIdentity(Index nbRows, Inde
   * \sa MatrixBase::Unit(Index), MatrixBase::UnitX(), MatrixBase::UnitY(), MatrixBase::UnitZ(), MatrixBase::UnitW()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBase<Derived>::Unit(Index newSize, Index i)
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBase<Derived>::Unit(Index newSize, Index i)
 {
   EIGEN_STATIC_ASSERT_VECTOR_ONLY(Derived)
   return BasisReturnType(SquareMatrixType::Identity(newSize,newSize), i);
@@ -813,7 +815,7 @@ EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBa
   * \sa MatrixBase::Unit(Index,Index), MatrixBase::UnitX(), MatrixBase::UnitY(), MatrixBase::UnitZ(), MatrixBase::UnitW()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBase<Derived>::Unit(Index i)
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBase<Derived>::Unit(Index i)
 {
   EIGEN_STATIC_ASSERT_VECTOR_ONLY(Derived)
   return BasisReturnType(SquareMatrixType::Identity(),i);
@@ -826,7 +828,7 @@ EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBa
   * \sa MatrixBase::Unit(Index,Index), MatrixBase::Unit(Index), MatrixBase::UnitY(), MatrixBase::UnitZ(), MatrixBase::UnitW()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBase<Derived>::UnitX()
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBase<Derived>::UnitX()
 { return Derived::Unit(0); }
 
 /** \returns an expression of the Y axis unit vector (0,1{,0}^*)
@@ -836,7 +838,7 @@ EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBa
   * \sa MatrixBase::Unit(Index,Index), MatrixBase::Unit(Index), MatrixBase::UnitY(), MatrixBase::UnitZ(), MatrixBase::UnitW()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBase<Derived>::UnitY()
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBase<Derived>::UnitY()
 { return Derived::Unit(1); }
 
 /** \returns an expression of the Z axis unit vector (0,0,1{,0}^*)
@@ -846,7 +848,7 @@ EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBa
   * \sa MatrixBase::Unit(Index,Index), MatrixBase::Unit(Index), MatrixBase::UnitY(), MatrixBase::UnitZ(), MatrixBase::UnitW()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBase<Derived>::UnitZ()
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBase<Derived>::UnitZ()
 { return Derived::Unit(2); }
 
 /** \returns an expression of the W axis unit vector (0,0,0,1)
@@ -856,7 +858,7 @@ EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBa
   * \sa MatrixBase::Unit(Index,Index), MatrixBase::Unit(Index), MatrixBase::UnitY(), MatrixBase::UnitZ(), MatrixBase::UnitW()
   */
 template<typename Derived>
-EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBase<Derived>::UnitW()
+EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::BasisReturnType MatrixBase<Derived>::UnitW()
 { return Derived::Unit(3); }
 
 } // end namespace Eigen

extern/Eigen3/Eigen/src/Core/CwiseTernaryOp.h

@@ -0,0 +1,197 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// Copyright (C) 2008-2014 Gael Guennebaud <gael.guennebaud@inria.fr>
+// Copyright (C) 2006-2008 Benoit Jacob <jacob.benoit.1@gmail.com>
+// Copyright (C) 2016 Eugene Brevdo <ebrevdo@gmail.com>
+//
+// This Source Code Form is subject to the terms of the Mozilla
+// Public License v. 2.0. If a copy of the MPL was not distributed
+// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
+
+#ifndef EIGEN_CWISE_TERNARY_OP_H
+#define EIGEN_CWISE_TERNARY_OP_H
+
+namespace Eigen {
+
+namespace internal {
+template <typename TernaryOp, typename Arg1, typename Arg2, typename Arg3>
+struct traits<CwiseTernaryOp<TernaryOp, Arg1, Arg2, Arg3> > {
+  // we must not inherit from traits<Arg1> since it has
+  // the potential to cause problems with MSVC
+  typedef typename remove_all<Arg1>::type Ancestor;
+  typedef typename traits<Ancestor>::XprKind XprKind;
+  enum {
+    RowsAtCompileTime = traits<Ancestor>::RowsAtCompileTime,
+    ColsAtCompileTime = traits<Ancestor>::ColsAtCompileTime,
+    MaxRowsAtCompileTime = traits<Ancestor>::MaxRowsAtCompileTime,
+    MaxColsAtCompileTime = traits<Ancestor>::MaxColsAtCompileTime
+  };
+
+  // even though we require Arg1, Arg2, and Arg3 to have the same scalar type
+  // (see CwiseTernaryOp constructor),
+  // we still want to handle the case when the result type is different.
+  typedef typename result_of<TernaryOp(
+      const typename Arg1::Scalar&, const typename Arg2::Scalar&,
+      const typename Arg3::Scalar&)>::type Scalar;
+
+  typedef typename internal::traits<Arg1>::StorageKind StorageKind;
+  typedef typename internal::traits<Arg1>::StorageIndex StorageIndex;
+
+  typedef typename Arg1::Nested Arg1Nested;
+  typedef typename Arg2::Nested Arg2Nested;
+  typedef typename Arg3::Nested Arg3Nested;
+  typedef typename remove_reference<Arg1Nested>::type _Arg1Nested;
+  typedef typename remove_reference<Arg2Nested>::type _Arg2Nested;
+  typedef typename remove_reference<Arg3Nested>::type _Arg3Nested;
+  enum { Flags = _Arg1Nested::Flags & RowMajorBit };
+};
+}  // end namespace internal
+
+template <typename TernaryOp, typename Arg1, typename Arg2, typename Arg3,
+          typename StorageKind>
+class CwiseTernaryOpImpl;
+
+/** \class CwiseTernaryOp
+  * \ingroup Core_Module
+  *
+  * \brief Generic expression where a coefficient-wise ternary operator is
+ * applied to two expressions
+  *
+  * \tparam TernaryOp template functor implementing the operator
+  * \tparam Arg1Type the type of the first argument
+  * \tparam Arg2Type the type of the second argument
+  * \tparam Arg3Type the type of the third argument
+  *
+  * This class represents an expression where a coefficient-wise ternary
+ * operator is applied to three expressions.
+  * It is the return type of ternary operators, by which we mean only those
+ * ternary operators where
+  * all three arguments are Eigen expressions.
+  * For example, the return type of betainc(matrix1, matrix2, matrix3) is a
+ * CwiseTernaryOp.
+  *
+  * Most of the time, this is the only way that it is used, so you typically
+ * don't have to name
+  * CwiseTernaryOp types explicitly.
+  *
+  * \sa MatrixBase::ternaryExpr(const MatrixBase<Argument2> &, const
+ * MatrixBase<Argument3> &, const CustomTernaryOp &) const, class CwiseBinaryOp,
+ * class CwiseUnaryOp, class CwiseNullaryOp
+  */
+template <typename TernaryOp, typename Arg1Type, typename Arg2Type,
+          typename Arg3Type>
+class CwiseTernaryOp : public CwiseTernaryOpImpl<
+                           TernaryOp, Arg1Type, Arg2Type, Arg3Type,
+                           typename internal::traits<Arg1Type>::StorageKind>,
+                       internal::no_assignment_operator
+{
+ public:
+  typedef typename internal::remove_all<Arg1Type>::type Arg1;
+  typedef typename internal::remove_all<Arg2Type>::type Arg2;
+  typedef typename internal::remove_all<Arg3Type>::type Arg3;
+
+  typedef typename CwiseTernaryOpImpl<
+      TernaryOp, Arg1Type, Arg2Type, Arg3Type,
+      typename internal::traits<Arg1Type>::StorageKind>::Base Base;
+  EIGEN_GENERIC_PUBLIC_INTERFACE(CwiseTernaryOp)
+
+  typedef typename internal::ref_selector<Arg1Type>::type Arg1Nested;
+  typedef typename internal::ref_selector<Arg2Type>::type Arg2Nested;
+  typedef typename internal::ref_selector<Arg3Type>::type Arg3Nested;
+  typedef typename internal::remove_reference<Arg1Nested>::type _Arg1Nested;
+  typedef typename internal::remove_reference<Arg2Nested>::type _Arg2Nested;
+  typedef typename internal::remove_reference<Arg3Nested>::type _Arg3Nested;
+
+  EIGEN_DEVICE_FUNC
+  EIGEN_STRONG_INLINE CwiseTernaryOp(const Arg1& a1, const Arg2& a2,
+                                     const Arg3& a3,
+                                     const TernaryOp& func = TernaryOp())
+      : m_arg1(a1), m_arg2(a2), m_arg3(a3), m_functor(func) {
+    // require the sizes to match
+    EIGEN_STATIC_ASSERT_SAME_MATRIX_SIZE(Arg1, Arg2)
+    EIGEN_STATIC_ASSERT_SAME_MATRIX_SIZE(Arg1, Arg3)
+
+    // The index types should match
+    EIGEN_STATIC_ASSERT((internal::is_same<
+                         typename internal::traits<Arg1Type>::StorageKind,
+                         typename internal::traits<Arg2Type>::StorageKind>::value),
+                        STORAGE_KIND_MUST_MATCH)
+    EIGEN_STATIC_ASSERT((internal::is_same<
+                         typename internal::traits<Arg1Type>::StorageKind,
+                         typename internal::traits<Arg3Type>::StorageKind>::value),
+                        STORAGE_KIND_MUST_MATCH)
+
+    eigen_assert(a1.rows() == a2.rows() && a1.cols() == a2.cols() &&
+                 a1.rows() == a3.rows() && a1.cols() == a3.cols());
+  }
+
+  EIGEN_DEVICE_FUNC
+  EIGEN_STRONG_INLINE Index rows() const {
+    // return the fixed size type if available to enable compile time
+    // optimizations
+    if (internal::traits<typename internal::remove_all<Arg1Nested>::type>::
+                RowsAtCompileTime == Dynamic &&
+        internal::traits<typename internal::remove_all<Arg2Nested>::type>::
+                RowsAtCompileTime == Dynamic)
+      return m_arg3.rows();
+    else if (internal::traits<typename internal::remove_all<Arg1Nested>::type>::
+                     RowsAtCompileTime == Dynamic &&
+             internal::traits<typename internal::remove_all<Arg3Nested>::type>::
+                     RowsAtCompileTime == Dynamic)
+      return m_arg2.rows();
+    else
+      return m_arg1.rows();
+  }
+  EIGEN_DEVICE_FUNC
+  EIGEN_STRONG_INLINE Index cols() const {
+    // return the fixed size type if available to enable compile time
+    // optimizations
+    if (internal::traits<typename internal::remove_all<Arg1Nested>::type>::
+                ColsAtCompileTime == Dynamic &&
+        internal::traits<typename internal::remove_all<Arg2Nested>::type>::
+                ColsAtCompileTime == Dynamic)
+      return m_arg3.cols();
+    else if (internal::traits<typename internal::remove_all<Arg1Nested>::type>::
+                     ColsAtCompileTime == Dynamic &&
+             internal::traits<typename internal::remove_all<Arg3Nested>::type>::
+                     ColsAtCompileTime == Dynamic)
+      return m_arg2.cols();
+    else
+      return m_arg1.cols();
+  }
+
+  /** \returns the first argument nested expression */
+  EIGEN_DEVICE_FUNC
+  const _Arg1Nested& arg1() const { return m_arg1; }
+  /** \returns the first argument nested expression */
+  EIGEN_DEVICE_FUNC
+  const _Arg2Nested& arg2() const { return m_arg2; }
+  /** \returns the third argument nested expression */
+  EIGEN_DEVICE_FUNC
+  const _Arg3Nested& arg3() const { return m_arg3; }
+  /** \returns the functor representing the ternary operation */
+  EIGEN_DEVICE_FUNC
+  const TernaryOp& functor() const { return m_functor; }
+
+ protected:
+  Arg1Nested m_arg1;
+  Arg2Nested m_arg2;
+  Arg3Nested m_arg3;
+  const TernaryOp m_functor;
+};
+
+// Generic API dispatcher
+template <typename TernaryOp, typename Arg1, typename Arg2, typename Arg3,
+          typename StorageKind>
+class CwiseTernaryOpImpl
+    : public internal::generic_xpr_base<
+          CwiseTernaryOp<TernaryOp, Arg1, Arg2, Arg3> >::type {
+ public:
+  typedef typename internal::generic_xpr_base<
+      CwiseTernaryOp<TernaryOp, Arg1, Arg2, Arg3> >::type Base;
+};
+
+}  // end namespace Eigen
+
+#endif  // EIGEN_CWISE_TERNARY_OP_H

extern/Eigen3/Eigen/src/Core/CwiseUnaryOp.h

@@ -1,7 +1,7 @@
 // This file is part of Eigen, a lightweight C++ template library
 // for linear algebra.
 //
-// Copyright (C) 2008-2010 Gael Guennebaud <gael.guennebaud@inria.fr>
+// Copyright (C) 2008-2014 Gael Guennebaud <gael.guennebaud@inria.fr>
 // Copyright (C) 2006-2008 Benoit Jacob <jacob.benoit.1@gmail.com>
 //
 // This Source Code Form is subject to the terms of the Mozilla
@@ -13,13 +13,32 @@
 
 namespace Eigen { 
 
+namespace internal {
+template<typename UnaryOp, typename XprType>
+struct traits<CwiseUnaryOp<UnaryOp, XprType> >
+ : traits<XprType>
+{
+  typedef typename result_of<
+                     UnaryOp(const typename XprType::Scalar&)
+                   >::type Scalar;
+  typedef typename XprType::Nested XprTypeNested;
+  typedef typename remove_reference<XprTypeNested>::type _XprTypeNested;
+  enum {
+    Flags = _XprTypeNested::Flags & RowMajorBit 
+  };
+};
+}
+
+template<typename UnaryOp, typename XprType, typename StorageKind>
+class CwiseUnaryOpImpl;
+
 /** \class CwiseUnaryOp
   * \ingroup Core_Module
   *
   * \brief Generic expression where a coefficient-wise unary operator is applied to an expression
   *
-  * \param UnaryOp template functor implementing the operator
-  * \param XprType the type of the expression to which we are applying the unary operator
+  * \tparam UnaryOp template functor implementing the operator
+  * \tparam XprType the type of the expression to which we are applying the unary operator
   *
   * This class represents an expression where a unary operator is applied to an expression.
   * It is the return type of all operations taking exactly 1 input expression, regardless of the
@@ -32,93 +51,51 @@ namespace Eigen {
   *
   * \sa MatrixBase::unaryExpr(const CustomUnaryOp &) const, class CwiseBinaryOp, class CwiseNullaryOp
   */
-
-namespace internal {
 template<typename UnaryOp, typename XprType>
-struct traits<CwiseUnaryOp<UnaryOp, XprType> >
- : traits<XprType>
-{
-  typedef typename result_of<
-                     UnaryOp(typename XprType::Scalar)
-                   >::type Scalar;
-  typedef typename XprType::Nested XprTypeNested;
-  typedef typename remove_reference<XprTypeNested>::type _XprTypeNested;
-  enum {
-    Flags = _XprTypeNested::Flags & (
-      HereditaryBits | LinearAccessBit | AlignedBit
-      | (functor_traits<UnaryOp>::PacketAccess ? PacketAccessBit : 0)),
-    CoeffReadCost = EIGEN_ADD_COST(_XprTypeNested::CoeffReadCost, functor_traits<UnaryOp>::Cost)
-  };
-};
-}
-
-template<typename UnaryOp, typename XprType, typename StorageKind>
-class CwiseUnaryOpImpl;
-
-template<typename UnaryOp, typename XprType>
-class CwiseUnaryOp : internal::no_assignment_operator,
-  public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>
+class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
 {
   public:
 
     typedef typename CwiseUnaryOpImpl<UnaryOp, XprType,typename internal::traits<XprType>::StorageKind>::Base Base;
     EIGEN_GENERIC_PUBLIC_INTERFACE(CwiseUnaryOp)
+    typedef typename internal::ref_selector<XprType>::type XprTypeNested;
+    typedef typename internal::remove_all<XprType>::type NestedExpression;
 
-    inline CwiseUnaryOp(const XprType& xpr, const UnaryOp& func = UnaryOp())
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+    explicit CwiseUnaryOp(const XprType& xpr, const UnaryOp& func = UnaryOp())
       : m_xpr(xpr), m_functor(func) {}
 
-    EIGEN_STRONG_INLINE Index rows() const { return m_xpr.rows(); }
-    EIGEN_STRONG_INLINE Index cols() const { return m_xpr.cols(); }
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+    Index rows() const { return m_xpr.rows(); }
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+    Index cols() const { return m_xpr.cols(); }
 
     /** \returns the functor representing the unary operation */
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
     const UnaryOp& functor() const { return m_functor; }
 
     /** \returns the nested expression */
-    const typename internal::remove_all<typename XprType::Nested>::type&
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+    const typename internal::remove_all<XprTypeNested>::type&
     nestedExpression() const { return m_xpr; }
 
     /** \returns the nested expression */
-    typename internal::remove_all<typename XprType::Nested>::type&
-    nestedExpression() { return m_xpr.const_cast_derived(); }
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+    typename internal::remove_all<XprTypeNested>::type&
+    nestedExpression() { return m_xpr; }
 
   protected:
-    typename XprType::Nested m_xpr;
+    XprTypeNested m_xpr;
     const UnaryOp m_functor;
 };
 
-// This is the generic implementation for dense storage.
-// It can be used for any expression types implementing the dense concept.
-template<typename UnaryOp, typename XprType>
-class CwiseUnaryOpImpl<UnaryOp,XprType,Dense>
-  : public internal::dense_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
+// Generic API dispatcher
+template<typename UnaryOp, typename XprType, typename StorageKind>
+class CwiseUnaryOpImpl
+  : public internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type
 {
-  public:
-
-    typedef CwiseUnaryOp<UnaryOp, XprType> Derived;
-    typedef typename internal::dense_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type Base;
-    EIGEN_DENSE_PUBLIC_INTERFACE(Derived)
-
-    EIGEN_STRONG_INLINE const Scalar coeff(Index rowId, Index colId) const
-    {
-      return derived().functor()(derived().nestedExpression().coeff(rowId, colId));
-    }
-
-    template<int LoadMode>
-    EIGEN_STRONG_INLINE PacketScalar packet(Index rowId, Index colId) const
-    {
-      return derived().functor().packetOp(derived().nestedExpression().template packet<LoadMode>(rowId, colId));
-    }
-
-    EIGEN_STRONG_INLINE const Scalar coeff(Index index) const
-    {
-      return derived().functor()(derived().nestedExpression().coeff(index));
-    }
-
-    template<int LoadMode>
-    EIGEN_STRONG_INLINE PacketScalar packet(Index index) const
-    {
-      return derived().functor().packetOp(derived().nestedExpression().template packet<LoadMode>(index));
-    }
+public:
+  typedef typename internal::generic_xpr_base<CwiseUnaryOp<UnaryOp, XprType> >::type Base;
 };
 
 } // end namespace Eigen

extern/Eigen3/Eigen/src/Core/CwiseUnaryView.h

@@ -12,33 +12,19 @@
 
 namespace Eigen {
 
-/** \class CwiseUnaryView
-  * \ingroup Core_Module
-  *
-  * \brief Generic lvalue expression of a coefficient-wise unary operator of a matrix or a vector
-  *
-  * \param ViewOp template functor implementing the view
-  * \param MatrixType the type of the matrix we are applying the unary operator
-  *
-  * This class represents a lvalue expression of a generic unary view operator of a matrix or a vector.
-  * It is the return type of real() and imag(), and most of the time this is the only way it is used.
-  *
-  * \sa MatrixBase::unaryViewExpr(const CustomUnaryOp &) const, class CwiseUnaryOp
-  */
-
 namespace internal {
 template<typename ViewOp, typename MatrixType>
 struct traits<CwiseUnaryView<ViewOp, MatrixType> >
  : traits<MatrixType>
 {
   typedef typename result_of<
-                     ViewOp(typename traits<MatrixType>::Scalar)
+                     ViewOp(const typename traits<MatrixType>::Scalar&)
                    >::type Scalar;
   typedef typename MatrixType::Nested MatrixTypeNested;
   typedef typename remove_all<MatrixTypeNested>::type _MatrixTypeNested;
   enum {
-    Flags = (traits<_MatrixTypeNested>::Flags & (HereditaryBits | LvalueBit | LinearAccessBit | DirectAccessBit)),
-    CoeffReadCost = traits<_MatrixTypeNested>::CoeffReadCost + functor_traits<ViewOp>::Cost,
+    FlagsLvalueBit = is_lvalue<MatrixType>::value ? LvalueBit : 0,
+    Flags = traits<_MatrixTypeNested>::Flags & (RowMajorBit | FlagsLvalueBit | DirectAccessBit), // FIXME DirectAccessBit should not be handled by expressions
     MatrixTypeInnerStride =  inner_stride_at_compile_time<MatrixType>::ret,
     // need to cast the sizeof's from size_t to int explicitly, otherwise:
     // "error: no integral type can represent all of the enumerator values
@@ -55,6 +41,19 @@ struct traits<CwiseUnaryView<ViewOp, MatrixType> >
 template<typename ViewOp, typename MatrixType, typename StorageKind>
 class CwiseUnaryViewImpl;
 
+/** \class CwiseUnaryView
+  * \ingroup Core_Module
+  *
+  * \brief Generic lvalue expression of a coefficient-wise unary operator of a matrix or a vector
+  *
+  * \tparam ViewOp template functor implementing the view
+  * \tparam MatrixType the type of the matrix we are applying the unary operator
+  *
+  * This class represents a lvalue expression of a generic unary view operator of a matrix or a vector.
+  * It is the return type of real() and imag(), and most of the time this is the only way it is used.
+  *
+  * \sa MatrixBase::unaryViewExpr(const CustomUnaryOp &) const, class CwiseUnaryOp
+  */
 template<typename ViewOp, typename MatrixType>
 class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename internal::traits<MatrixType>::StorageKind>
 {
@@ -62,8 +61,10 @@ class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename in
 
     typedef typename CwiseUnaryViewImpl<ViewOp, MatrixType,typename internal::traits<MatrixType>::StorageKind>::Base Base;
     EIGEN_GENERIC_PUBLIC_INTERFACE(CwiseUnaryView)
+    typedef typename internal::ref_selector<MatrixType>::non_const_type MatrixTypeNested;
+    typedef typename internal::remove_all<MatrixType>::type NestedExpression;
 
-    inline CwiseUnaryView(const MatrixType& mat, const ViewOp& func = ViewOp())
+    explicit inline CwiseUnaryView(MatrixType& mat, const ViewOp& func = ViewOp())
       : m_matrix(mat), m_functor(func) {}
 
     EIGEN_INHERIT_ASSIGNMENT_OPERATORS(CwiseUnaryView)
@@ -75,19 +76,27 @@ class CwiseUnaryView : public CwiseUnaryViewImpl<ViewOp, MatrixType, typename in
     const ViewOp& functor() const { return m_functor; }
 
     /** \returns the nested expression */
-    const typename internal::remove_all<typename MatrixType::Nested>::type&
+    const typename internal::remove_all<MatrixTypeNested>::type&
     nestedExpression() const { return m_matrix; }
 
     /** \returns the nested expression */
-    typename internal::remove_all<typename MatrixType::Nested>::type&
+    typename internal::remove_reference<MatrixTypeNested>::type&
     nestedExpression() { return m_matrix.const_cast_derived(); }
 
   protected:
-    // FIXME changed from MatrixType::Nested because of a weird compilation error with sun CC
-    typename internal::nested<MatrixType>::type m_matrix;
+    MatrixTypeNested m_matrix;
     ViewOp m_functor;
 };
 
+// Generic API dispatcher
+template<typename ViewOp, typename XprType, typename StorageKind>
+class CwiseUnaryViewImpl
+  : public internal::generic_xpr_base<CwiseUnaryView<ViewOp, XprType> >::type
+{
+public:
+  typedef typename internal::generic_xpr_base<CwiseUnaryView<ViewOp, XprType> >::type Base;
+};
+
 template<typename ViewOp, typename MatrixType>
 class CwiseUnaryViewImpl<ViewOp,MatrixType,Dense>
   : public internal::dense_xpr_base< CwiseUnaryView<ViewOp, MatrixType> >::type
@@ -100,38 +109,18 @@ class CwiseUnaryViewImpl<ViewOp,MatrixType,Dense>
     EIGEN_DENSE_PUBLIC_INTERFACE(Derived)
     EIGEN_INHERIT_ASSIGNMENT_OPERATORS(CwiseUnaryViewImpl)
     
-    inline Scalar* data() { return &coeffRef(0); }
-    inline const Scalar* data() const { return &coeff(0); }
+    EIGEN_DEVICE_FUNC inline Scalar* data() { return &(this->coeffRef(0)); }
+    EIGEN_DEVICE_FUNC inline const Scalar* data() const { return &(this->coeff(0)); }
 
-    inline Index innerStride() const
+    EIGEN_DEVICE_FUNC inline Index innerStride() const
     {
       return derived().nestedExpression().innerStride() * sizeof(typename internal::traits<MatrixType>::Scalar) / sizeof(Scalar);
     }
 
-    inline Index outerStride() const
+    EIGEN_DEVICE_FUNC inline Index outerStride() const
     {
       return derived().nestedExpression().outerStride() * sizeof(typename internal::traits<MatrixType>::Scalar) / sizeof(Scalar);
     }
-
-    EIGEN_STRONG_INLINE CoeffReturnType coeff(Index row, Index col) const
-    {
-      return derived().functor()(derived().nestedExpression().coeff(row, col));
-    }
-
-    EIGEN_STRONG_INLINE CoeffReturnType coeff(Index index) const
-    {
-      return derived().functor()(derived().nestedExpression().coeff(index));
-    }
-
-    EIGEN_STRONG_INLINE Scalar& coeffRef(Index row, Index col)
-    {
-      return derived().functor()(const_cast_derived().nestedExpression().coeffRef(row, col));
-    }
-
-    EIGEN_STRONG_INLINE Scalar& coeffRef(Index index)
-    {
-      return derived().functor()(const_cast_derived().nestedExpression().coeffRef(index));
-    }
 };
 
 } // end namespace Eigen

extern/Eigen3/Eigen/src/Core/DenseBase.h

@@ -34,37 +34,45 @@ static inline void check_DenseIndex_is_signed() {
   * \tparam Derived is the derived type, e.g., a matrix type or an expression.
   *
   * This class can be extended with the help of the plugin mechanism described on the page
-  * \ref TopicCustomizingEigen by defining the preprocessor symbol \c EIGEN_DENSEBASE_PLUGIN.
+  * \ref TopicCustomizing_Plugins by defining the preprocessor symbol \c EIGEN_DENSEBASE_PLUGIN.
   *
-  * \sa \ref TopicClassHierarchy
+  * \sa \blank \ref TopicClassHierarchy
   */
 template<typename Derived> class DenseBase
 #ifndef EIGEN_PARSED_BY_DOXYGEN
-  : public internal::special_scalar_op_base<Derived, typename internal::traits<Derived>::Scalar,
-                                            typename NumTraits<typename internal::traits<Derived>::Scalar>::Real,
-                                            DenseCoeffsBase<Derived> >
-#else
   : public DenseCoeffsBase<Derived>
+#else
+  : public DenseCoeffsBase<Derived,DirectWriteAccessors>
 #endif // not EIGEN_PARSED_BY_DOXYGEN
 {
   public:
 
-    class InnerIterator;
+    /** Inner iterator type to iterate over the coefficients of a row or column.
+      * \sa class InnerIterator
+      */
+    typedef Eigen::InnerIterator<Derived> InnerIterator;
 
     typedef typename internal::traits<Derived>::StorageKind StorageKind;
 
-    /** \brief The type of indices 
-      * \details To change this, \c \#define the preprocessor symbol \c EIGEN_DEFAULT_DENSE_INDEX_TYPE.
-      * \sa \ref TopicPreprocessorDirectives.
-      */
-    typedef typename internal::traits<Derived>::Index Index; 
+    /**
+      * \brief The type used to store indices
+      * \details This typedef is relevant for types that store multiple indices such as
+      *          PermutationMatrix or Transpositions, otherwise it defaults to Eigen::Index
+      * \sa \blank \ref TopicPreprocessorDirectives, Eigen::Index, SparseMatrixBase.
+     */
+    typedef typename internal::traits<Derived>::StorageIndex StorageIndex;
 
+    /** The numeric type of the expression' coefficients, e.g. float, double, int or std::complex<float>, etc. */
     typedef typename internal::traits<Derived>::Scalar Scalar;
-    typedef typename internal::packet_traits<Scalar>::type PacketScalar;
+    
+    /** The numeric type of the expression' coefficients, e.g. float, double, int or std::complex<float>, etc.
+      *
+      * It is an alias for the Scalar type */
+    typedef Scalar value_type;
+    
     typedef typename NumTraits<Scalar>::Real RealScalar;
-    typedef internal::special_scalar_op_base<Derived,Scalar,RealScalar, DenseCoeffsBase<Derived> > Base;
+    typedef DenseCoeffsBase<Derived> Base;
 
-    using Base::operator*;
     using Base::derived;
     using Base::const_cast_derived;
     using Base::rows;
@@ -74,16 +82,6 @@ template<typename Derived> class DenseBase
     using Base::colIndexByOuterInner;
     using Base::coeff;
     using Base::coeffByOuterInner;
-    using Base::packet;
-    using Base::packetByOuterInner;
-    using Base::writePacket;
-    using Base::writePacketByOuterInner;
-    using Base::coeffRef;
-    using Base::coeffRefByOuterInner;
-    using Base::copyCoeff;
-    using Base::copyCoeffByOuterInner;
-    using Base::copyPacket;
-    using Base::copyPacketByOuterInner;
     using Base::operator();
     using Base::operator[];
     using Base::x;
@@ -169,19 +167,46 @@ template<typename Derived> class DenseBase
       InnerSizeAtCompileTime = int(IsVectorAtCompileTime) ? int(SizeAtCompileTime)
                              : int(IsRowMajor) ? int(ColsAtCompileTime) : int(RowsAtCompileTime),
 
-      CoeffReadCost = internal::traits<Derived>::CoeffReadCost,
-        /**< This is a rough measure of how expensive it is to read one coefficient from
-          * this expression.
-          */
-
       InnerStrideAtCompileTime = internal::inner_stride_at_compile_time<Derived>::ret,
       OuterStrideAtCompileTime = internal::outer_stride_at_compile_time<Derived>::ret
     };
+    
+    typedef typename internal::find_best_packet<Scalar,SizeAtCompileTime>::type PacketScalar;
 
-    enum { ThisConstantIsPrivateInPlainObjectBase };
+    enum { IsPlainObjectBase = 0 };
+    
+    /** The plain matrix type corresponding to this expression.
+      * \sa PlainObject */
+    typedef Matrix<typename internal::traits<Derived>::Scalar,
+                internal::traits<Derived>::RowsAtCompileTime,
+                internal::traits<Derived>::ColsAtCompileTime,
+                AutoAlign | (internal::traits<Derived>::Flags&RowMajorBit ? RowMajor : ColMajor),
+                internal::traits<Derived>::MaxRowsAtCompileTime,
+                internal::traits<Derived>::MaxColsAtCompileTime
+          > PlainMatrix;
+    
+    /** The plain array type corresponding to this expression.
+      * \sa PlainObject */
+    typedef Array<typename internal::traits<Derived>::Scalar,
+                internal::traits<Derived>::RowsAtCompileTime,
+                internal::traits<Derived>::ColsAtCompileTime,
+                AutoAlign | (internal::traits<Derived>::Flags&RowMajorBit ? RowMajor : ColMajor),
+                internal::traits<Derived>::MaxRowsAtCompileTime,
+                internal::traits<Derived>::MaxColsAtCompileTime
+          > PlainArray;
+
+    /** \brief The plain matrix or array type corresponding to this expression.
+      *
+      * This is not necessarily exactly the return type of eval(). In the case of plain matrices,
+      * the return type of eval() is a const reference to a matrix, not a matrix! It is however guaranteed
+      * that the return type of eval() is either PlainObject or const PlainObject&.
+      */
+    typedef typename internal::conditional<internal::is_same<typename internal::traits<Derived>::XprKind,MatrixXpr >::value,
+                                 PlainMatrix, PlainArray>::type PlainObject;
 
     /** \returns the number of nonzero coefficients which is in practice the number
       * of stored coefficients. */
+    EIGEN_DEVICE_FUNC
     inline Index nonZeros() const { return size(); }
 
     /** \returns the outer size.
@@ -189,6 +214,7 @@ template<typename Derived> class DenseBase
       * \note For a vector, this returns just 1. For a matrix (non-vector), this is the major dimension
       * with respect to the \ref TopicStorageOrders "storage order", i.e., the number of columns for a
       * column-major matrix, and the number of rows for a row-major matrix. */
+    EIGEN_DEVICE_FUNC
     Index outerSize() const
     {
       return IsVectorAtCompileTime ? 1
@@ -200,6 +226,7 @@ template<typename Derived> class DenseBase
       * \note For a vector, this is just the size. For a matrix (non-vector), this is the minor dimension
       * with respect to the \ref TopicStorageOrders "storage order", i.e., the number of rows for a 
       * column-major matrix, and the number of columns for a row-major matrix. */
+    EIGEN_DEVICE_FUNC
     Index innerSize() const
     {
       return IsVectorAtCompileTime ? this->size()
@@ -210,6 +237,7 @@ template<typename Derived> class DenseBase
       * Matrix::resize() and Array::resize(). The present method only asserts that the new size equals the old size, and does
       * nothing else.
       */
+    EIGEN_DEVICE_FUNC
     void resize(Index newSize)
     {
       EIGEN_ONLY_USED_FOR_DEBUG(newSize);
@@ -220,22 +248,22 @@ template<typename Derived> class DenseBase
       * Matrix::resize() and Array::resize(). The present method only asserts that the new size equals the old size, and does
       * nothing else.
       */
-    void resize(Index nbRows, Index nbCols)
+    EIGEN_DEVICE_FUNC
+    void resize(Index rows, Index cols)
     {
-      EIGEN_ONLY_USED_FOR_DEBUG(nbRows);
-      EIGEN_ONLY_USED_FOR_DEBUG(nbCols);
-      eigen_assert(nbRows == this->rows() && nbCols == this->cols()
+      EIGEN_ONLY_USED_FOR_DEBUG(rows);
+      EIGEN_ONLY_USED_FOR_DEBUG(cols);
+      eigen_assert(rows == this->rows() && cols == this->cols()
                 && "DenseBase::resize() does not actually allow to resize.");
     }
 
 #ifndef EIGEN_PARSED_BY_DOXYGEN
-
     /** \internal Represents a matrix with all coefficients equal to one another*/
-    typedef CwiseNullaryOp<internal::scalar_constant_op<Scalar>,Derived> ConstantReturnType;
-    /** \internal Represents a vector with linearly spaced coefficients that allows sequential access only. */
-    typedef CwiseNullaryOp<internal::linspaced_op<Scalar,false>,Derived> SequentialLinSpacedReturnType;
+    typedef CwiseNullaryOp<internal::scalar_constant_op<Scalar>,PlainObject> ConstantReturnType;
+    /** \internal \deprecated Represents a vector with linearly spaced coefficients that allows sequential access only. */
+    typedef CwiseNullaryOp<internal::linspaced_op<Scalar,PacketScalar>,PlainObject> SequentialLinSpacedReturnType;
     /** \internal Represents a vector with linearly spaced coefficients that allows random access. */
-    typedef CwiseNullaryOp<internal::linspaced_op<Scalar,true>,Derived> RandomAccessLinSpacedReturnType;
+    typedef CwiseNullaryOp<internal::linspaced_op<Scalar,PacketScalar>,PlainObject> RandomAccessLinSpacedReturnType;
     /** \internal the return type of MatrixBase::eigenvalues() */
     typedef Matrix<typename NumTraits<typename internal::traits<Derived>::Scalar>::Real, internal::traits<Derived>::ColsAtCompileTime, 1> EigenvaluesReturnType;
 
@@ -243,120 +271,133 @@ template<typename Derived> class DenseBase
 
     /** Copies \a other into *this. \returns a reference to *this. */
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
     Derived& operator=(const DenseBase<OtherDerived>& other);
 
     /** Special case of the template operator=, in order to prevent the compiler
       * from generating a default operator= (issue hit with g++ 4.1)
       */
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
     Derived& operator=(const DenseBase& other);
 
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC
     Derived& operator=(const EigenBase<OtherDerived> &other);
 
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC
     Derived& operator+=(const EigenBase<OtherDerived> &other);
 
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC
     Derived& operator-=(const EigenBase<OtherDerived> &other);
 
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC
     Derived& operator=(const ReturnByValue<OtherDerived>& func);
 
-    /** \internal Copies \a other into *this without evaluating other. \returns a reference to *this. */
+    /** \internal
+      * Copies \a other into *this without evaluating other. \returns a reference to *this.
+      * \deprecated */
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC
     Derived& lazyAssign(const DenseBase<OtherDerived>& other);
 
-    /** \internal Evaluates \a other into *this. \returns a reference to *this. */
-    template<typename OtherDerived>
-    Derived& lazyAssign(const ReturnByValue<OtherDerived>& other);
-
+    EIGEN_DEVICE_FUNC
     CommaInitializer<Derived> operator<< (const Scalar& s);
 
+    /** \deprecated it now returns \c *this */
     template<unsigned int Added,unsigned int Removed>
-    const Flagged<Derived, Added, Removed> flagged() const;
+    EIGEN_DEPRECATED
+    const Derived& flagged() const
+    { return derived(); }
 
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC
     CommaInitializer<Derived> operator<< (const DenseBase<OtherDerived>& other);
 
-    Eigen::Transpose<Derived> transpose();
-	typedef typename internal::add_const<Transpose<const Derived> >::type ConstTransposeReturnType;
+    typedef Transpose<Derived> TransposeReturnType;
+    EIGEN_DEVICE_FUNC
+    TransposeReturnType transpose();
+    typedef typename internal::add_const<Transpose<const Derived> >::type ConstTransposeReturnType;
+    EIGEN_DEVICE_FUNC
     ConstTransposeReturnType transpose() const;
+    EIGEN_DEVICE_FUNC
     void transposeInPlace();
-#ifndef EIGEN_NO_DEBUG
-  protected:
-    template<typename OtherDerived>
-    void checkTransposeAliasing(const OtherDerived& other) const;
-  public:
-#endif
 
-
-    static const ConstantReturnType
+    EIGEN_DEVICE_FUNC static const ConstantReturnType
     Constant(Index rows, Index cols, const Scalar& value);
-    static const ConstantReturnType
+    EIGEN_DEVICE_FUNC static const ConstantReturnType
     Constant(Index size, const Scalar& value);
-    static const ConstantReturnType
+    EIGEN_DEVICE_FUNC static const ConstantReturnType
     Constant(const Scalar& value);
 
-    static const SequentialLinSpacedReturnType
+    EIGEN_DEVICE_FUNC static const SequentialLinSpacedReturnType
     LinSpaced(Sequential_t, Index size, const Scalar& low, const Scalar& high);
-    static const RandomAccessLinSpacedReturnType
+    EIGEN_DEVICE_FUNC static const RandomAccessLinSpacedReturnType
     LinSpaced(Index size, const Scalar& low, const Scalar& high);
-    static const SequentialLinSpacedReturnType
+    EIGEN_DEVICE_FUNC static const SequentialLinSpacedReturnType
     LinSpaced(Sequential_t, const Scalar& low, const Scalar& high);
-    static const RandomAccessLinSpacedReturnType
+    EIGEN_DEVICE_FUNC static const RandomAccessLinSpacedReturnType
     LinSpaced(const Scalar& low, const Scalar& high);
 
-    template<typename CustomNullaryOp>
-    static const CwiseNullaryOp<CustomNullaryOp, Derived>
+    template<typename CustomNullaryOp> EIGEN_DEVICE_FUNC
+    static const CwiseNullaryOp<CustomNullaryOp, PlainObject>
     NullaryExpr(Index rows, Index cols, const CustomNullaryOp& func);
-    template<typename CustomNullaryOp>
-    static const CwiseNullaryOp<CustomNullaryOp, Derived>
+    template<typename CustomNullaryOp> EIGEN_DEVICE_FUNC
+    static const CwiseNullaryOp<CustomNullaryOp, PlainObject>
     NullaryExpr(Index size, const CustomNullaryOp& func);
-    template<typename CustomNullaryOp>
-    static const CwiseNullaryOp<CustomNullaryOp, Derived>
+    template<typename CustomNullaryOp> EIGEN_DEVICE_FUNC
+    static const CwiseNullaryOp<CustomNullaryOp, PlainObject>
     NullaryExpr(const CustomNullaryOp& func);
 
-    static const ConstantReturnType Zero(Index rows, Index cols);
-    static const ConstantReturnType Zero(Index size);
-    static const ConstantReturnType Zero();
-    static const ConstantReturnType Ones(Index rows, Index cols);
-    static const ConstantReturnType Ones(Index size);
-    static const ConstantReturnType Ones();
+    EIGEN_DEVICE_FUNC static const ConstantReturnType Zero(Index rows, Index cols);
+    EIGEN_DEVICE_FUNC static const ConstantReturnType Zero(Index size);
+    EIGEN_DEVICE_FUNC static const ConstantReturnType Zero();
+    EIGEN_DEVICE_FUNC static const ConstantReturnType Ones(Index rows, Index cols);
+    EIGEN_DEVICE_FUNC static const ConstantReturnType Ones(Index size);
+    EIGEN_DEVICE_FUNC static const ConstantReturnType Ones();
 
-    void fill(const Scalar& value);
-    Derived& setConstant(const Scalar& value);
-    Derived& setLinSpaced(Index size, const Scalar& low, const Scalar& high);
-    Derived& setLinSpaced(const Scalar& low, const Scalar& high);
-    Derived& setZero();
-    Derived& setOnes();
-    Derived& setRandom();
+    EIGEN_DEVICE_FUNC void fill(const Scalar& value);
+    EIGEN_DEVICE_FUNC Derived& setConstant(const Scalar& value);
+    EIGEN_DEVICE_FUNC Derived& setLinSpaced(Index size, const Scalar& low, const Scalar& high);
+    EIGEN_DEVICE_FUNC Derived& setLinSpaced(const Scalar& low, const Scalar& high);
+    EIGEN_DEVICE_FUNC Derived& setZero();
+    EIGEN_DEVICE_FUNC Derived& setOnes();
+    EIGEN_DEVICE_FUNC Derived& setRandom();
 
-    template<typename OtherDerived>
+    template<typename OtherDerived> EIGEN_DEVICE_FUNC
     bool isApprox(const DenseBase<OtherDerived>& other,
                   const RealScalar& prec = NumTraits<Scalar>::dummy_precision()) const;
+    EIGEN_DEVICE_FUNC 
     bool isMuchSmallerThan(const RealScalar& other,
                            const RealScalar& prec = NumTraits<Scalar>::dummy_precision()) const;
-    template<typename OtherDerived>
+    template<typename OtherDerived> EIGEN_DEVICE_FUNC
     bool isMuchSmallerThan(const DenseBase<OtherDerived>& other,
                            const RealScalar& prec = NumTraits<Scalar>::dummy_precision()) const;
 
-    bool isApproxToConstant(const Scalar& value, const RealScalar& prec = NumTraits<Scalar>::dummy_precision()) const;
-    bool isConstant(const Scalar& value, const RealScalar& prec = NumTraits<Scalar>::dummy_precision()) const;
-    bool isZero(const RealScalar& prec = NumTraits<Scalar>::dummy_precision()) const;
-    bool isOnes(const RealScalar& prec = NumTraits<Scalar>::dummy_precision()) const;
+    EIGEN_DEVICE_FUNC bool isApproxToConstant(const Scalar& value, const RealScalar& prec = NumTraits<Scalar>::dummy_precision()) const;
+    EIGEN_DEVICE_FUNC bool isConstant(const Scalar& value, const RealScalar& prec = NumTraits<Scalar>::dummy_precision()) const;
+    EIGEN_DEVICE_FUNC bool isZero(const RealScalar& prec = NumTraits<Scalar>::dummy_precision()) const;
+    EIGEN_DEVICE_FUNC bool isOnes(const RealScalar& prec = NumTraits<Scalar>::dummy_precision()) const;
     
     inline bool hasNaN() const;
     inline bool allFinite() const;
 
-    inline Derived& operator*=(const Scalar& other);
-    inline Derived& operator/=(const Scalar& other);
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+    Derived& operator*=(const Scalar& other);
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
+    Derived& operator/=(const Scalar& other);
 
     typedef typename internal::add_const_on_value_type<typename internal::eval<Derived>::type>::type EvalReturnType;
     /** \returns the matrix or vector obtained by evaluating this expression.
       *
       * Notice that in the case of a plain matrix or vector (not an expression) this function just returns
       * a const reference, in order to avoid a useless copy.
+      * 
+      * \warning Be carefull with eval() and the auto C++ keyword, as detailed in this \link TopicPitfalls_auto_keyword page \endlink.
       */
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE EvalReturnType eval() const
     {
       // Even though MSVC does not honor strong inlining when the return type
@@ -364,61 +405,78 @@ template<typename Derived> class DenseBase
       // size types on MSVC.
       return typename internal::eval<Derived>::type(derived());
     }
-
+    
     /** swaps *this with the expression \a other.
       *
       */
     template<typename OtherDerived>
-    void swap(const DenseBase<OtherDerived>& other,
-              int = OtherDerived::ThisConstantIsPrivateInPlainObjectBase)
+    EIGEN_DEVICE_FUNC
+    void swap(const DenseBase<OtherDerived>& other)
     {
-      SwapWrapper<Derived>(derived()).lazyAssign(other.derived());
+      EIGEN_STATIC_ASSERT(!OtherDerived::IsPlainObjectBase,THIS_EXPRESSION_IS_NOT_A_LVALUE__IT_IS_READ_ONLY);
+      eigen_assert(rows()==other.rows() && cols()==other.cols());
+      call_assignment(derived(), other.const_cast_derived(), internal::swap_assign_op<Scalar>());
     }
 
     /** swaps *this with the matrix or array \a other.
       *
       */
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC
     void swap(PlainObjectBase<OtherDerived>& other)
     {
-      SwapWrapper<Derived>(derived()).lazyAssign(other.derived());
+      eigen_assert(rows()==other.rows() && cols()==other.cols());
+      call_assignment(derived(), other.derived(), internal::swap_assign_op<Scalar>());
     }
 
+    EIGEN_DEVICE_FUNC inline const NestByValue<Derived> nestByValue() const;
+    EIGEN_DEVICE_FUNC inline const ForceAlignedAccess<Derived> forceAlignedAccess() const;
+    EIGEN_DEVICE_FUNC inline ForceAlignedAccess<Derived> forceAlignedAccess();
+    template<bool Enable> EIGEN_DEVICE_FUNC
+    inline const typename internal::conditional<Enable,ForceAlignedAccess<Derived>,Derived&>::type forceAlignedAccessIf() const;
+    template<bool Enable> EIGEN_DEVICE_FUNC
+    inline typename internal::conditional<Enable,ForceAlignedAccess<Derived>,Derived&>::type forceAlignedAccessIf();
 
-    inline const NestByValue<Derived> nestByValue() const;
-    inline const ForceAlignedAccess<Derived> forceAlignedAccess() const;
-    inline ForceAlignedAccess<Derived> forceAlignedAccess();
-    template<bool Enable> inline const typename internal::conditional<Enable,ForceAlignedAccess<Derived>,Derived&>::type forceAlignedAccessIf() const;
-    template<bool Enable> inline typename internal::conditional<Enable,ForceAlignedAccess<Derived>,Derived&>::type forceAlignedAccessIf();
+    EIGEN_DEVICE_FUNC Scalar sum() const;
+    EIGEN_DEVICE_FUNC Scalar mean() const;
+    EIGEN_DEVICE_FUNC Scalar trace() const;
 
-    Scalar sum() const;
-    Scalar mean() const;
-    Scalar trace() const;
+    EIGEN_DEVICE_FUNC Scalar prod() const;
 
-    Scalar prod() const;
+    EIGEN_DEVICE_FUNC typename internal::traits<Derived>::Scalar minCoeff() const;
+    EIGEN_DEVICE_FUNC typename internal::traits<Derived>::Scalar maxCoeff() const;
 
-    typename internal::traits<Derived>::Scalar minCoeff() const;
-    typename internal::traits<Derived>::Scalar maxCoeff() const;
-
-    template<typename IndexType>
+    template<typename IndexType> EIGEN_DEVICE_FUNC
     typename internal::traits<Derived>::Scalar minCoeff(IndexType* row, IndexType* col) const;
-    template<typename IndexType>
+    template<typename IndexType> EIGEN_DEVICE_FUNC
     typename internal::traits<Derived>::Scalar maxCoeff(IndexType* row, IndexType* col) const;
-    template<typename IndexType>
+    template<typename IndexType> EIGEN_DEVICE_FUNC
     typename internal::traits<Derived>::Scalar minCoeff(IndexType* index) const;
-    template<typename IndexType>
+    template<typename IndexType> EIGEN_DEVICE_FUNC
     typename internal::traits<Derived>::Scalar maxCoeff(IndexType* index) const;
 
     template<typename BinaryOp>
-    typename internal::result_of<BinaryOp(typename internal::traits<Derived>::Scalar)>::type
-    redux(const BinaryOp& func) const;
+    EIGEN_DEVICE_FUNC
+    Scalar redux(const BinaryOp& func) const;
 
     template<typename Visitor>
+    EIGEN_DEVICE_FUNC
     void visit(Visitor& func) const;
 
-    inline const WithFormat<Derived> format(const IOFormat& fmt) const;
+    /** \returns a WithFormat proxy object allowing to print a matrix the with given
+      * format \a fmt.
+      *
+      * See class IOFormat for some examples.
+      *
+      * \sa class IOFormat, class WithFormat
+      */
+    inline const WithFormat<Derived> format(const IOFormat& fmt) const
+    {
+      return WithFormat<Derived>(derived(), fmt);
+    }
 
     /** \returns the unique coefficient of a 1x1 expression */
+    EIGEN_DEVICE_FUNC
     CoeffReturnType value() const
     {
       EIGEN_STATIC_ASSERT_SIZE_1x1(Derived)
@@ -426,23 +484,44 @@ template<typename Derived> class DenseBase
       return derived().coeff(0,0);
     }
 
-    bool all(void) const;
-    bool any(void) const;
-    Index count() const;
+    EIGEN_DEVICE_FUNC bool all() const;
+    EIGEN_DEVICE_FUNC bool any() const;
+    EIGEN_DEVICE_FUNC Index count() const;
 
     typedef VectorwiseOp<Derived, Horizontal> RowwiseReturnType;
     typedef const VectorwiseOp<const Derived, Horizontal> ConstRowwiseReturnType;
     typedef VectorwiseOp<Derived, Vertical> ColwiseReturnType;
     typedef const VectorwiseOp<const Derived, Vertical> ConstColwiseReturnType;
 
-    ConstRowwiseReturnType rowwise() const;
-    RowwiseReturnType rowwise();
-    ConstColwiseReturnType colwise() const;
-    ColwiseReturnType colwise();
+    /** \returns a VectorwiseOp wrapper of *this providing additional partial reduction operations
+    *
+    * Example: \include MatrixBase_rowwise.cpp
+    * Output: \verbinclude MatrixBase_rowwise.out
+    *
+    * \sa colwise(), class VectorwiseOp, \ref TutorialReductionsVisitorsBroadcasting
+    */
+    //Code moved here due to a CUDA compiler bug
+    EIGEN_DEVICE_FUNC inline ConstRowwiseReturnType rowwise() const {
+      return ConstRowwiseReturnType(derived());
+    }
+    EIGEN_DEVICE_FUNC RowwiseReturnType rowwise();
 
-    static const CwiseNullaryOp<internal::scalar_random_op<Scalar>,Derived> Random(Index rows, Index cols);
-    static const CwiseNullaryOp<internal::scalar_random_op<Scalar>,Derived> Random(Index size);
-    static const CwiseNullaryOp<internal::scalar_random_op<Scalar>,Derived> Random();
+    /** \returns a VectorwiseOp wrapper of *this providing additional partial reduction operations
+    *
+    * Example: \include MatrixBase_colwise.cpp
+    * Output: \verbinclude MatrixBase_colwise.out
+    *
+    * \sa rowwise(), class VectorwiseOp, \ref TutorialReductionsVisitorsBroadcasting
+    */
+    EIGEN_DEVICE_FUNC inline ConstColwiseReturnType colwise() const {
+      return ConstColwiseReturnType(derived());
+    }
+    EIGEN_DEVICE_FUNC ColwiseReturnType colwise();
+
+    typedef CwiseNullaryOp<internal::scalar_random_op<Scalar>,PlainObject> RandomReturnType;
+    static const RandomReturnType Random(Index rows, Index cols);
+    static const RandomReturnType Random(Index size);
+    static const RandomReturnType Random();
 
     template<typename ThenDerived,typename ElseDerived>
     const Select<Derived,ThenDerived,ElseDerived>
@@ -460,45 +539,56 @@ template<typename Derived> class DenseBase
     template<int p> RealScalar lpNorm() const;
 
     template<int RowFactor, int ColFactor>
-    inline const Replicate<Derived,RowFactor,ColFactor> replicate() const;
-    
-    typedef Replicate<Derived,Dynamic,Dynamic> ReplicateReturnType;
-    inline const ReplicateReturnType replicate(Index rowFacor,Index colFactor) const;
+    EIGEN_DEVICE_FUNC
+    const Replicate<Derived,RowFactor,ColFactor> replicate() const;
+    /**
+    * \return an expression of the replication of \c *this
+    *
+    * Example: \include MatrixBase_replicate_int_int.cpp
+    * Output: \verbinclude MatrixBase_replicate_int_int.out
+    *
+    * \sa VectorwiseOp::replicate(), DenseBase::replicate<int,int>(), class Replicate
+    */
+    //Code moved here due to a CUDA compiler bug
+    EIGEN_DEVICE_FUNC
+    const Replicate<Derived, Dynamic, Dynamic> replicate(Index rowFactor, Index colFactor) const
+    {
+      return Replicate<Derived, Dynamic, Dynamic>(derived(), rowFactor, colFactor);
+    }
 
     typedef Reverse<Derived, BothDirections> ReverseReturnType;
     typedef const Reverse<const Derived, BothDirections> ConstReverseReturnType;
-    ReverseReturnType reverse();
-    ConstReverseReturnType reverse() const;
-    void reverseInPlace();
+    EIGEN_DEVICE_FUNC ReverseReturnType reverse();
+    /** This is the const version of reverse(). */
+    //Code moved here due to a CUDA compiler bug
+    EIGEN_DEVICE_FUNC ConstReverseReturnType reverse() const
+    {
+      return ConstReverseReturnType(derived());
+    }
+    EIGEN_DEVICE_FUNC void reverseInPlace();
 
 #define EIGEN_CURRENT_STORAGE_BASE_CLASS Eigen::DenseBase
+#define EIGEN_DOC_BLOCK_ADDONS_NOT_INNER_PANEL
+#define EIGEN_DOC_BLOCK_ADDONS_INNER_PANEL_IF(COND)
 #   include "../plugins/BlockMethods.h"
 #   ifdef EIGEN_DENSEBASE_PLUGIN
 #     include EIGEN_DENSEBASE_PLUGIN
 #   endif
 #undef EIGEN_CURRENT_STORAGE_BASE_CLASS
-
-#ifdef EIGEN2_SUPPORT
-
-    Block<Derived> corner(CornerType type, Index cRows, Index cCols);
-    const Block<Derived> corner(CornerType type, Index cRows, Index cCols) const;
-    template<int CRows, int CCols>
-    Block<Derived, CRows, CCols> corner(CornerType type);
-    template<int CRows, int CCols>
-    const Block<Derived, CRows, CCols> corner(CornerType type) const;
-
-#endif // EIGEN2_SUPPORT
-
+#undef EIGEN_DOC_BLOCK_ADDONS_NOT_INNER_PANEL
+#undef EIGEN_DOC_BLOCK_ADDONS_INNER_PANEL_IF
 
     // disable the use of evalTo for dense objects with a nice compilation error
-    template<typename Dest> inline void evalTo(Dest& ) const
+    template<typename Dest>
+    EIGEN_DEVICE_FUNC
+    inline void evalTo(Dest& ) const
     {
       EIGEN_STATIC_ASSERT((internal::is_same<Dest,void>::value),THE_EVAL_EVALTO_FUNCTION_SHOULD_NEVER_BE_CALLED_FOR_DENSE_OBJECTS);
     }
 
   protected:
     /** Default constructor. Do nothing. */
-    DenseBase()
+    EIGEN_DEVICE_FUNC DenseBase()
     {
       /* Just checks for self-consistency of the flags.
        * Only do it when debugging Eigen, as this borders on paranoiac and could slow compilation down
@@ -511,9 +601,9 @@ template<typename Derived> class DenseBase
     }
 
   private:
-    explicit DenseBase(int);
-    DenseBase(int,int);
-    template<typename OtherDerived> explicit DenseBase(const DenseBase<OtherDerived>&);
+    EIGEN_DEVICE_FUNC explicit DenseBase(int);
+    EIGEN_DEVICE_FUNC DenseBase(int,int);
+    template<typename OtherDerived> EIGEN_DEVICE_FUNC explicit DenseBase(const DenseBase<OtherDerived>&);
 };
 
 } // end namespace Eigen

extern/Eigen3/Eigen/src/Core/DenseCoeffsBase.h

@@ -35,7 +35,6 @@ class DenseCoeffsBase<Derived,ReadOnlyAccessors> : public EigenBase<Derived>
 {
   public:
     typedef typename internal::traits<Derived>::StorageKind StorageKind;
-    typedef typename internal::traits<Derived>::Index Index;
     typedef typename internal::traits<Derived>::Scalar Scalar;
     typedef typename internal::packet_traits<Scalar>::type PacketScalar;
 
@@ -61,6 +60,7 @@ class DenseCoeffsBase<Derived,ReadOnlyAccessors> : public EigenBase<Derived>
     using Base::size;
     using Base::derived;
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Index rowIndexByOuterInner(Index outer, Index inner) const
     {
       return int(Derived::RowsAtCompileTime) == 1 ? 0
@@ -69,6 +69,7 @@ class DenseCoeffsBase<Derived,ReadOnlyAccessors> : public EigenBase<Derived>
           : inner;
     }
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Index colIndexByOuterInner(Index outer, Index inner) const
     {
       return int(Derived::ColsAtCompileTime) == 1 ? 0
@@ -91,13 +92,15 @@ class DenseCoeffsBase<Derived,ReadOnlyAccessors> : public EigenBase<Derived>
       *
       * \sa operator()(Index,Index) const, coeffRef(Index,Index), coeff(Index) const
       */
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE CoeffReturnType coeff(Index row, Index col) const
     {
       eigen_internal_assert(row >= 0 && row < rows()
-                        && col >= 0 && col < cols());
-      return derived().coeff(row, col);
+                         && col >= 0 && col < cols());
+      return internal::evaluator<Derived>(derived()).coeff(row,col);
     }
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE CoeffReturnType coeffByOuterInner(Index outer, Index inner) const
     {
       return coeff(rowIndexByOuterInner(outer, inner),
@@ -108,11 +111,12 @@ class DenseCoeffsBase<Derived,ReadOnlyAccessors> : public EigenBase<Derived>
       *
       * \sa operator()(Index,Index), operator[](Index)
       */
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE CoeffReturnType operator()(Index row, Index col) const
     {
       eigen_assert(row >= 0 && row < rows()
           && col >= 0 && col < cols());
-      return derived().coeff(row, col);
+      return coeff(row, col);
     }
 
     /** Short version: don't use this function, use
@@ -130,11 +134,14 @@ class DenseCoeffsBase<Derived,ReadOnlyAccessors> : public EigenBase<Derived>
       * \sa operator[](Index) const, coeffRef(Index), coeff(Index,Index) const
       */
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE CoeffReturnType
     coeff(Index index) const
     {
+      EIGEN_STATIC_ASSERT(internal::evaluator<Derived>::Flags & LinearAccessBit,
+                          THIS_COEFFICIENT_ACCESSOR_TAKING_ONE_ACCESS_IS_ONLY_FOR_EXPRESSIONS_ALLOWING_LINEAR_ACCESS)
       eigen_internal_assert(index >= 0 && index < size());
-      return derived().coeff(index);
+      return internal::evaluator<Derived>(derived()).coeff(index);
     }
 
 
@@ -146,15 +153,14 @@ class DenseCoeffsBase<Derived,ReadOnlyAccessors> : public EigenBase<Derived>
       * z() const, w() const
       */
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE CoeffReturnType
     operator[](Index index) const
     {
-      #ifndef EIGEN2_SUPPORT
       EIGEN_STATIC_ASSERT(Derived::IsVectorAtCompileTime,
                           THE_BRACKET_OPERATOR_IS_ONLY_FOR_VECTORS__USE_THE_PARENTHESIS_OPERATOR_INSTEAD)
-      #endif
       eigen_assert(index >= 0 && index < size());
-      return derived().coeff(index);
+      return coeff(index);
     }
 
     /** \returns the coefficient at given index.
@@ -167,32 +173,49 @@ class DenseCoeffsBase<Derived,ReadOnlyAccessors> : public EigenBase<Derived>
       * z() const, w() const
       */
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE CoeffReturnType
     operator()(Index index) const
     {
       eigen_assert(index >= 0 && index < size());
-      return derived().coeff(index);
+      return coeff(index);
     }
 
     /** equivalent to operator[](0).  */
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE CoeffReturnType
     x() const { return (*this)[0]; }
 
     /** equivalent to operator[](1).  */
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE CoeffReturnType
-    y() const { return (*this)[1]; }
+    y() const
+    {
+      EIGEN_STATIC_ASSERT(Derived::SizeAtCompileTime==-1 || Derived::SizeAtCompileTime>=2, OUT_OF_RANGE_ACCESS);
+      return (*this)[1];
+    }
 
     /** equivalent to operator[](2).  */
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE CoeffReturnType
-    z() const { return (*this)[2]; }
+    z() const
+    {
+      EIGEN_STATIC_ASSERT(Derived::SizeAtCompileTime==-1 || Derived::SizeAtCompileTime>=3, OUT_OF_RANGE_ACCESS);
+      return (*this)[2];
+    }
 
     /** equivalent to operator[](3).  */
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE CoeffReturnType
-    w() const { return (*this)[3]; }
+    w() const
+    {
+      EIGEN_STATIC_ASSERT(Derived::SizeAtCompileTime==-1 || Derived::SizeAtCompileTime>=4, OUT_OF_RANGE_ACCESS);
+      return (*this)[3];
+    }
 
     /** \internal
       * \returns the packet of coefficients starting at the given row and column. It is your responsibility
@@ -207,9 +230,9 @@ class DenseCoeffsBase<Derived,ReadOnlyAccessors> : public EigenBase<Derived>
     template<int LoadMode>
     EIGEN_STRONG_INLINE PacketReturnType packet(Index row, Index col) const
     {
-      eigen_internal_assert(row >= 0 && row < rows()
-                      && col >= 0 && col < cols());
-      return derived().template packet<LoadMode>(row,col);
+      typedef typename internal::packet_traits<Scalar>::type DefaultPacketType;
+      eigen_internal_assert(row >= 0 && row < rows() && col >= 0 && col < cols());
+      return internal::evaluator<Derived>(derived()).template packet<LoadMode,DefaultPacketType>(row,col);
     }
 
 
@@ -234,8 +257,11 @@ class DenseCoeffsBase<Derived,ReadOnlyAccessors> : public EigenBase<Derived>
     template<int LoadMode>
     EIGEN_STRONG_INLINE PacketReturnType packet(Index index) const
     {
+      EIGEN_STATIC_ASSERT(internal::evaluator<Derived>::Flags & LinearAccessBit,
+                          THIS_COEFFICIENT_ACCESSOR_TAKING_ONE_ACCESS_IS_ONLY_FOR_EXPRESSIONS_ALLOWING_LINEAR_ACCESS)
+      typedef typename internal::packet_traits<Scalar>::type DefaultPacketType;
       eigen_internal_assert(index >= 0 && index < size());
-      return derived().template packet<LoadMode>(index);
+      return internal::evaluator<Derived>(derived()).template packet<LoadMode,DefaultPacketType>(index);
     }
 
   protected:
@@ -278,7 +304,6 @@ class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived,
     typedef DenseCoeffsBase<Derived, ReadOnlyAccessors> Base;
 
     typedef typename internal::traits<Derived>::StorageKind StorageKind;
-    typedef typename internal::traits<Derived>::Index Index;
     typedef typename internal::traits<Derived>::Scalar Scalar;
     typedef typename internal::packet_traits<Scalar>::type PacketScalar;
     typedef typename NumTraits<Scalar>::Real RealScalar;
@@ -311,13 +336,15 @@ class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived,
       *
       * \sa operator()(Index,Index), coeff(Index, Index) const, coeffRef(Index)
       */
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Scalar& coeffRef(Index row, Index col)
     {
       eigen_internal_assert(row >= 0 && row < rows()
-                        && col >= 0 && col < cols());
-      return derived().coeffRef(row, col);
+                         && col >= 0 && col < cols());
+      return internal::evaluator<Derived>(derived()).coeffRef(row,col);
     }
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Scalar&
     coeffRefByOuterInner(Index outer, Index inner)
     {
@@ -330,12 +357,13 @@ class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived,
       * \sa operator[](Index)
       */
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Scalar&
     operator()(Index row, Index col)
     {
       eigen_assert(row >= 0 && row < rows()
           && col >= 0 && col < cols());
-      return derived().coeffRef(row, col);
+      return coeffRef(row, col);
     }
 
 
@@ -354,11 +382,14 @@ class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived,
       * \sa operator[](Index), coeff(Index) const, coeffRef(Index,Index)
       */
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Scalar&
     coeffRef(Index index)
     {
+      EIGEN_STATIC_ASSERT(internal::evaluator<Derived>::Flags & LinearAccessBit,
+                          THIS_COEFFICIENT_ACCESSOR_TAKING_ONE_ACCESS_IS_ONLY_FOR_EXPRESSIONS_ALLOWING_LINEAR_ACCESS)
       eigen_internal_assert(index >= 0 && index < size());
-      return derived().coeffRef(index);
+      return internal::evaluator<Derived>(derived()).coeffRef(index);
     }
 
     /** \returns a reference to the coefficient at given index.
@@ -368,15 +399,14 @@ class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived,
       * \sa operator[](Index) const, operator()(Index,Index), x(), y(), z(), w()
       */
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Scalar&
     operator[](Index index)
     {
-      #ifndef EIGEN2_SUPPORT
       EIGEN_STATIC_ASSERT(Derived::IsVectorAtCompileTime,
                           THE_BRACKET_OPERATOR_IS_ONLY_FOR_VECTORS__USE_THE_PARENTHESIS_OPERATOR_INSTEAD)
-      #endif
       eigen_assert(index >= 0 && index < size());
-      return derived().coeffRef(index);
+      return coeffRef(index);
     }
 
     /** \returns a reference to the coefficient at given index.
@@ -388,167 +418,49 @@ class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived,
       * \sa operator[](Index) const, operator()(Index,Index), x(), y(), z(), w()
       */
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Scalar&
     operator()(Index index)
     {
       eigen_assert(index >= 0 && index < size());
-      return derived().coeffRef(index);
+      return coeffRef(index);
     }
 
     /** equivalent to operator[](0).  */
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Scalar&
     x() { return (*this)[0]; }
 
     /** equivalent to operator[](1).  */
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Scalar&
-    y() { return (*this)[1]; }
+    y()
+    {
+      EIGEN_STATIC_ASSERT(Derived::SizeAtCompileTime==-1 || Derived::SizeAtCompileTime>=2, OUT_OF_RANGE_ACCESS);
+      return (*this)[1];
+    }
 
     /** equivalent to operator[](2).  */
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Scalar&
-    z() { return (*this)[2]; }
+    z()
+    {
+      EIGEN_STATIC_ASSERT(Derived::SizeAtCompileTime==-1 || Derived::SizeAtCompileTime>=3, OUT_OF_RANGE_ACCESS);
+      return (*this)[2];
+    }
 
     /** equivalent to operator[](3).  */
 
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Scalar&
-    w() { return (*this)[3]; }
-
-    /** \internal
-      * Stores the given packet of coefficients, at the given row and column of this expression. It is your responsibility
-      * to ensure that a packet really starts there. This method is only available on expressions having the
-      * PacketAccessBit.
-      *
-      * The \a LoadMode parameter may have the value \a #Aligned or \a #Unaligned. Its effect is to select
-      * the appropriate vectorization instruction. Aligned access is faster, but is only possible for packets
-      * starting at an address which is a multiple of the packet size.
-      */
-
-    template<int StoreMode>
-    EIGEN_STRONG_INLINE void writePacket
-    (Index row, Index col, const typename internal::packet_traits<Scalar>::type& val)
+    w()
     {
-      eigen_internal_assert(row >= 0 && row < rows()
-                        && col >= 0 && col < cols());
-      derived().template writePacket<StoreMode>(row,col,val);
+      EIGEN_STATIC_ASSERT(Derived::SizeAtCompileTime==-1 || Derived::SizeAtCompileTime>=4, OUT_OF_RANGE_ACCESS);
+      return (*this)[3];
     }
-
-
-    /** \internal */
-    template<int StoreMode>
-    EIGEN_STRONG_INLINE void writePacketByOuterInner
-    (Index outer, Index inner, const typename internal::packet_traits<Scalar>::type& val)
-    {
-      writePacket<StoreMode>(rowIndexByOuterInner(outer, inner),
-                            colIndexByOuterInner(outer, inner),
-                            val);
-    }
-
-    /** \internal
-      * Stores the given packet of coefficients, at the given index in this expression. It is your responsibility
-      * to ensure that a packet really starts there. This method is only available on expressions having the
-      * PacketAccessBit and the LinearAccessBit.
-      *
-      * The \a LoadMode parameter may have the value \a Aligned or \a Unaligned. Its effect is to select
-      * the appropriate vectorization instruction. Aligned access is faster, but is only possible for packets
-      * starting at an address which is a multiple of the packet size.
-      */
-    template<int StoreMode>
-    EIGEN_STRONG_INLINE void writePacket
-    (Index index, const typename internal::packet_traits<Scalar>::type& val)
-    {
-      eigen_internal_assert(index >= 0 && index < size());
-      derived().template writePacket<StoreMode>(index,val);
-    }
-
-#ifndef EIGEN_PARSED_BY_DOXYGEN
-
-    /** \internal Copies the coefficient at position (row,col) of other into *this.
-      *
-      * This method is overridden in SwapWrapper, allowing swap() assignments to share 99% of their code
-      * with usual assignments.
-      *
-      * Outside of this internal usage, this method has probably no usefulness. It is hidden in the public API dox.
-      */
-
-    template<typename OtherDerived>
-    EIGEN_STRONG_INLINE void copyCoeff(Index row, Index col, const DenseBase<OtherDerived>& other)
-    {
-      eigen_internal_assert(row >= 0 && row < rows()
-                        && col >= 0 && col < cols());
-      derived().coeffRef(row, col) = other.derived().coeff(row, col);
-    }
-
-    /** \internal Copies the coefficient at the given index of other into *this.
-      *
-      * This method is overridden in SwapWrapper, allowing swap() assignments to share 99% of their code
-      * with usual assignments.
-      *
-      * Outside of this internal usage, this method has probably no usefulness. It is hidden in the public API dox.
-      */
-
-    template<typename OtherDerived>
-    EIGEN_STRONG_INLINE void copyCoeff(Index index, const DenseBase<OtherDerived>& other)
-    {
-      eigen_internal_assert(index >= 0 && index < size());
-      derived().coeffRef(index) = other.derived().coeff(index);
-    }
-
-
-    template<typename OtherDerived>
-    EIGEN_STRONG_INLINE void copyCoeffByOuterInner(Index outer, Index inner, const DenseBase<OtherDerived>& other)
-    {
-      const Index row = rowIndexByOuterInner(outer,inner);
-      const Index col = colIndexByOuterInner(outer,inner);
-      // derived() is important here: copyCoeff() may be reimplemented in Derived!
-      derived().copyCoeff(row, col, other);
-    }
-
-    /** \internal Copies the packet at position (row,col) of other into *this.
-      *
-      * This method is overridden in SwapWrapper, allowing swap() assignments to share 99% of their code
-      * with usual assignments.
-      *
-      * Outside of this internal usage, this method has probably no usefulness. It is hidden in the public API dox.
-      */
-
-    template<typename OtherDerived, int StoreMode, int LoadMode>
-    EIGEN_STRONG_INLINE void copyPacket(Index row, Index col, const DenseBase<OtherDerived>& other)
-    {
-      eigen_internal_assert(row >= 0 && row < rows()
-                        && col >= 0 && col < cols());
-      derived().template writePacket<StoreMode>(row, col,
-        other.derived().template packet<LoadMode>(row, col));
-    }
-
-    /** \internal Copies the packet at the given index of other into *this.
-      *
-      * This method is overridden in SwapWrapper, allowing swap() assignments to share 99% of their code
-      * with usual assignments.
-      *
-      * Outside of this internal usage, this method has probably no usefulness. It is hidden in the public API dox.
-      */
-
-    template<typename OtherDerived, int StoreMode, int LoadMode>
-    EIGEN_STRONG_INLINE void copyPacket(Index index, const DenseBase<OtherDerived>& other)
-    {
-      eigen_internal_assert(index >= 0 && index < size());
-      derived().template writePacket<StoreMode>(index,
-        other.derived().template packet<LoadMode>(index));
-    }
-
-    /** \internal */
-    template<typename OtherDerived, int StoreMode, int LoadMode>
-    EIGEN_STRONG_INLINE void copyPacketByOuterInner(Index outer, Index inner, const DenseBase<OtherDerived>& other)
-    {
-      const Index row = rowIndexByOuterInner(outer,inner);
-      const Index col = colIndexByOuterInner(outer,inner);
-      // derived() is important here: copyCoeff() may be reimplemented in Derived!
-      derived().template copyPacket< OtherDerived, StoreMode, LoadMode>(row, col, other);
-    }
-#endif
-
 };
 
 /** \brief Base class providing direct read-only coefficient access to matrices and arrays.
@@ -560,7 +472,7 @@ class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived,
   * inherits DenseCoeffsBase<Derived, ReadOnlyAccessors> which defines functions to access entries read-only using
   * \c operator() .
   *
-  * \sa \ref TopicClassHierarchy
+  * \sa \blank \ref TopicClassHierarchy
   */
 template<typename Derived>
 class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
@@ -568,7 +480,6 @@ class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived
   public:
 
     typedef DenseCoeffsBase<Derived, ReadOnlyAccessors> Base;
-    typedef typename internal::traits<Derived>::Index Index;
     typedef typename internal::traits<Derived>::Scalar Scalar;
     typedef typename NumTraits<Scalar>::Real RealScalar;
 
@@ -581,6 +492,7 @@ class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived
       *
       * \sa outerStride(), rowStride(), colStride()
       */
+    EIGEN_DEVICE_FUNC
     inline Index innerStride() const
     {
       return derived().innerStride();
@@ -591,6 +503,7 @@ class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived
       *
       * \sa innerStride(), rowStride(), colStride()
       */
+    EIGEN_DEVICE_FUNC
     inline Index outerStride() const
     {
       return derived().outerStride();
@@ -606,6 +519,7 @@ class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived
       *
       * \sa innerStride(), outerStride(), colStride()
       */
+    EIGEN_DEVICE_FUNC
     inline Index rowStride() const
     {
       return Derived::IsRowMajor ? outerStride() : innerStride();
@@ -615,6 +529,7 @@ class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived
       *
       * \sa innerStride(), outerStride(), rowStride()
       */
+    EIGEN_DEVICE_FUNC
     inline Index colStride() const
     {
       return Derived::IsRowMajor ? innerStride() : outerStride();
@@ -630,7 +545,7 @@ class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived
   * inherits DenseCoeffsBase<Derived, WriteAccessors> which defines functions to access entries read/write using
   * \c operator().
   *
-  * \sa \ref TopicClassHierarchy
+  * \sa \blank \ref TopicClassHierarchy
   */
 template<typename Derived>
 class DenseCoeffsBase<Derived, DirectWriteAccessors>
@@ -639,7 +554,6 @@ class DenseCoeffsBase<Derived, DirectWriteAccessors>
   public:
 
     typedef DenseCoeffsBase<Derived, WriteAccessors> Base;
-    typedef typename internal::traits<Derived>::Index Index;
     typedef typename internal::traits<Derived>::Scalar Scalar;
     typedef typename NumTraits<Scalar>::Real RealScalar;
 
@@ -652,6 +566,7 @@ class DenseCoeffsBase<Derived, DirectWriteAccessors>
       *
       * \sa outerStride(), rowStride(), colStride()
       */
+    EIGEN_DEVICE_FUNC
     inline Index innerStride() const
     {
       return derived().innerStride();
@@ -662,6 +577,7 @@ class DenseCoeffsBase<Derived, DirectWriteAccessors>
       *
       * \sa innerStride(), rowStride(), colStride()
       */
+    EIGEN_DEVICE_FUNC
     inline Index outerStride() const
     {
       return derived().outerStride();
@@ -677,6 +593,7 @@ class DenseCoeffsBase<Derived, DirectWriteAccessors>
       *
       * \sa innerStride(), outerStride(), colStride()
       */
+    EIGEN_DEVICE_FUNC
     inline Index rowStride() const
     {
       return Derived::IsRowMajor ? outerStride() : innerStride();
@@ -686,6 +603,7 @@ class DenseCoeffsBase<Derived, DirectWriteAccessors>
       *
       * \sa innerStride(), outerStride(), rowStride()
       */
+    EIGEN_DEVICE_FUNC
     inline Index colStride() const
     {
       return Derived::IsRowMajor ? innerStride() : outerStride();
@@ -694,33 +612,42 @@ class DenseCoeffsBase<Derived, DirectWriteAccessors>
 
 namespace internal {
 
-template<typename Derived, bool JustReturnZero>
+template<int Alignment, typename Derived, bool JustReturnZero>
 struct first_aligned_impl
 {
-  static inline typename Derived::Index run(const Derived&)
+  static inline Index run(const Derived&)
   { return 0; }
 };
 
-template<typename Derived>
-struct first_aligned_impl<Derived, false>
+template<int Alignment, typename Derived>
+struct first_aligned_impl<Alignment, Derived, false>
 {
-  static inline typename Derived::Index run(const Derived& m)
+  static inline Index run(const Derived& m)
   {
-    return internal::first_aligned(&m.const_cast_derived().coeffRef(0,0), m.size());
+    return internal::first_aligned<Alignment>(m.data(), m.size());
   }
 };
 
-/** \internal \returns the index of the first element of the array that is well aligned for vectorization.
+/** \internal \returns the index of the first element of the array stored by \a m that is properly aligned with respect to \a Alignment for vectorization.
+  *
+  * \tparam Alignment requested alignment in Bytes.
   *
   * There is also the variant first_aligned(const Scalar*, Integer) defined in Memory.h. See it for more
   * documentation.
   */
-template<typename Derived>
-static inline typename Derived::Index first_aligned(const Derived& m)
+template<int Alignment, typename Derived>
+static inline Index first_aligned(const DenseBase<Derived>& m)
 {
-  return first_aligned_impl
-          <Derived, (Derived::Flags & AlignedBit) || !(Derived::Flags & DirectAccessBit)>
-          ::run(m);
+  enum { ReturnZero = (int(evaluator<Derived>::Alignment) >= Alignment) || !(Derived::Flags & DirectAccessBit) };
+  return first_aligned_impl<Alignment, Derived, ReturnZero>::run(m.derived());
+}
+
+template<typename Derived>
+static inline Index first_default_aligned(const DenseBase<Derived>& m)
+{
+  typedef typename Derived::Scalar Scalar;
+  typedef typename packet_traits<Scalar>::type DefaultPacketType;
+  return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
 }
 
 template<typename Derived, bool HasDirectAccess = has_direct_access<Derived>::ret>

extern/Eigen3/Eigen/src/Core/DenseStorage.h

@@ -3,7 +3,7 @@
 //
 // Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
 // Copyright (C) 2006-2009 Benoit Jacob <jacob.benoit.1@gmail.com>
-// Copyright (C) 2010 Hauke Heibel <hauke.heibel@gmail.com>
+// Copyright (C) 2010-2013 Hauke Heibel <hauke.heibel@gmail.com>
 //
 // This Source Code Form is subject to the terms of the Mozilla
 // Public License v. 2.0. If a copy of the MPL was not distributed
@@ -13,9 +13,9 @@
 #define EIGEN_MATRIXSTORAGE_H
 
 #ifdef EIGEN_DENSE_STORAGE_CTOR_PLUGIN
-  #define EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN EIGEN_DENSE_STORAGE_CTOR_PLUGIN;
+  #define EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN(X) X; EIGEN_DENSE_STORAGE_CTOR_PLUGIN;
 #else
-  #define EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN
+  #define EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN(X)
 #endif
 
 namespace Eigen {
@@ -24,7 +24,9 @@ namespace internal {
 
 struct constructor_without_unaligned_array_assert {};
 
-template<typename T, int Size> void check_static_allocation_size()
+template<typename T, int Size>
+EIGEN_DEVICE_FUNC
+void check_static_allocation_size()
 {
   // if EIGEN_STACK_ALLOCATION_LIMIT is defined to 0, then no limit
   #if EIGEN_STACK_ALLOCATION_LIMIT
@@ -38,18 +40,19 @@ template<typename T, int Size> void check_static_allocation_size()
   */
 template <typename T, int Size, int MatrixOrArrayOptions,
           int Alignment = (MatrixOrArrayOptions&DontAlign) ? 0
-                        : (((Size*sizeof(T))%16)==0) ? 16
-                        : 0 >
+                        : compute_default_alignment<T,Size>::value >
 struct plain_array
 {
   T array[Size];
 
-  plain_array() 
+  EIGEN_DEVICE_FUNC
+  plain_array()
   { 
     check_static_allocation_size<T,Size>();
   }
 
-  plain_array(constructor_without_unaligned_array_assert) 
+  EIGEN_DEVICE_FUNC
+  plain_array(constructor_without_unaligned_array_assert)
   { 
     check_static_allocation_size<T,Size>();
   }
@@ -64,29 +67,88 @@ struct plain_array
   template<typename PtrType>
   EIGEN_ALWAYS_INLINE PtrType eigen_unaligned_array_assert_workaround_gcc47(PtrType array) { return array; }
   #define EIGEN_MAKE_UNALIGNED_ARRAY_ASSERT(sizemask) \
-    eigen_assert((reinterpret_cast<size_t>(eigen_unaligned_array_assert_workaround_gcc47(array)) & sizemask) == 0 \
+    eigen_assert((internal::UIntPtr(eigen_unaligned_array_assert_workaround_gcc47(array)) & (sizemask)) == 0 \
               && "this assertion is explained here: " \
               "http://eigen.tuxfamily.org/dox-devel/group__TopicUnalignedArrayAssert.html" \
               " **** READ THIS WEB PAGE !!! ****");
 #else
   #define EIGEN_MAKE_UNALIGNED_ARRAY_ASSERT(sizemask) \
-    eigen_assert((reinterpret_cast<size_t>(array) & sizemask) == 0 \
+    eigen_assert((internal::UIntPtr(array) & (sizemask)) == 0 \
               && "this assertion is explained here: " \
               "http://eigen.tuxfamily.org/dox-devel/group__TopicUnalignedArrayAssert.html" \
               " **** READ THIS WEB PAGE !!! ****");
 #endif
 
 template <typename T, int Size, int MatrixOrArrayOptions>
-struct plain_array<T, Size, MatrixOrArrayOptions, 16>
+struct plain_array<T, Size, MatrixOrArrayOptions, 8>
 {
-  EIGEN_USER_ALIGN16 T array[Size];
+  EIGEN_ALIGN_TO_BOUNDARY(8) T array[Size];
 
+  EIGEN_DEVICE_FUNC
   plain_array() 
-  { 
-    EIGEN_MAKE_UNALIGNED_ARRAY_ASSERT(0xf);
+  {
+    EIGEN_MAKE_UNALIGNED_ARRAY_ASSERT(7);
     check_static_allocation_size<T,Size>();
   }
 
+  EIGEN_DEVICE_FUNC
+  plain_array(constructor_without_unaligned_array_assert) 
+  { 
+    check_static_allocation_size<T,Size>();
+  }
+};
+
+template <typename T, int Size, int MatrixOrArrayOptions>
+struct plain_array<T, Size, MatrixOrArrayOptions, 16>
+{
+  EIGEN_ALIGN_TO_BOUNDARY(16) T array[Size];
+
+  EIGEN_DEVICE_FUNC
+  plain_array() 
+  { 
+    EIGEN_MAKE_UNALIGNED_ARRAY_ASSERT(15);
+    check_static_allocation_size<T,Size>();
+  }
+
+  EIGEN_DEVICE_FUNC
+  plain_array(constructor_without_unaligned_array_assert) 
+  { 
+    check_static_allocation_size<T,Size>();
+  }
+};
+
+template <typename T, int Size, int MatrixOrArrayOptions>
+struct plain_array<T, Size, MatrixOrArrayOptions, 32>
+{
+  EIGEN_ALIGN_TO_BOUNDARY(32) T array[Size];
+
+  EIGEN_DEVICE_FUNC
+  plain_array() 
+  {
+    EIGEN_MAKE_UNALIGNED_ARRAY_ASSERT(31);
+    check_static_allocation_size<T,Size>();
+  }
+
+  EIGEN_DEVICE_FUNC
+  plain_array(constructor_without_unaligned_array_assert) 
+  { 
+    check_static_allocation_size<T,Size>();
+  }
+};
+
+template <typename T, int Size, int MatrixOrArrayOptions>
+struct plain_array<T, Size, MatrixOrArrayOptions, 64>
+{
+  EIGEN_ALIGN_TO_BOUNDARY(64) T array[Size];
+
+  EIGEN_DEVICE_FUNC
+  plain_array() 
+  { 
+    EIGEN_MAKE_UNALIGNED_ARRAY_ASSERT(63);
+    check_static_allocation_size<T,Size>();
+  }
+
+  EIGEN_DEVICE_FUNC
   plain_array(constructor_without_unaligned_array_assert) 
   { 
     check_static_allocation_size<T,Size>();
@@ -96,9 +158,9 @@ struct plain_array<T, Size, MatrixOrArrayOptions, 16>
 template <typename T, int MatrixOrArrayOptions, int Alignment>
 struct plain_array<T, 0, MatrixOrArrayOptions, Alignment>
 {
-  EIGEN_USER_ALIGN16 T array[1];
-  plain_array() {}
-  plain_array(constructor_without_unaligned_array_assert) {}
+  T array[1];
+  EIGEN_DEVICE_FUNC plain_array() {}
+  EIGEN_DEVICE_FUNC plain_array(constructor_without_unaligned_array_assert) {}
 };
 
 } // end namespace internal
@@ -122,41 +184,54 @@ template<typename T, int Size, int _Rows, int _Cols, int _Options> class DenseSt
 {
     internal::plain_array<T,Size,_Options> m_data;
   public:
-    DenseStorage() {}
-    DenseStorage(internal::constructor_without_unaligned_array_assert)
-      : m_data(internal::constructor_without_unaligned_array_assert()) {}
-    DenseStorage(const DenseStorage& other) : m_data(other.m_data) {}
-    DenseStorage& operator=(const DenseStorage& other)
-    {
-      if (this != &other) m_data = other.m_data;
-      return *this;
+    EIGEN_DEVICE_FUNC DenseStorage() {
+      EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN(Index size = Size)
     }
-    DenseStorage(DenseIndex,DenseIndex,DenseIndex) {}
-    void swap(DenseStorage& other) { std::swap(m_data,other.m_data); }
-    static DenseIndex rows(void) {return _Rows;}
-    static DenseIndex cols(void) {return _Cols;}
-    void conservativeResize(DenseIndex,DenseIndex,DenseIndex) {}
-    void resize(DenseIndex,DenseIndex,DenseIndex) {}
-    const T *data() const { return m_data.array; }
-    T *data() { return m_data.array; }
+    EIGEN_DEVICE_FUNC
+    explicit DenseStorage(internal::constructor_without_unaligned_array_assert)
+      : m_data(internal::constructor_without_unaligned_array_assert()) {}
+    EIGEN_DEVICE_FUNC 
+    DenseStorage(const DenseStorage& other) : m_data(other.m_data) {
+      EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN(Index size = Size)
+    }
+    EIGEN_DEVICE_FUNC 
+    DenseStorage& operator=(const DenseStorage& other)
+    { 
+      if (this != &other) m_data = other.m_data;
+      return *this; 
+    }
+    EIGEN_DEVICE_FUNC DenseStorage(Index size, Index rows, Index cols) {
+      EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN({})
+      eigen_internal_assert(size==rows*cols && rows==_Rows && cols==_Cols);
+      EIGEN_UNUSED_VARIABLE(size);
+      EIGEN_UNUSED_VARIABLE(rows);
+      EIGEN_UNUSED_VARIABLE(cols);
+    }
+    EIGEN_DEVICE_FUNC void swap(DenseStorage& other) { std::swap(m_data,other.m_data); }
+    EIGEN_DEVICE_FUNC static Index rows(void) {return _Rows;}
+    EIGEN_DEVICE_FUNC static Index cols(void) {return _Cols;}
+    EIGEN_DEVICE_FUNC void conservativeResize(Index,Index,Index) {}
+    EIGEN_DEVICE_FUNC void resize(Index,Index,Index) {}
+    EIGEN_DEVICE_FUNC const T *data() const { return m_data.array; }
+    EIGEN_DEVICE_FUNC T *data() { return m_data.array; }
 };
 
 // null matrix
 template<typename T, int _Rows, int _Cols, int _Options> class DenseStorage<T, 0, _Rows, _Cols, _Options>
 {
   public:
-    DenseStorage() {}
-    DenseStorage(internal::constructor_without_unaligned_array_assert) {}
-    DenseStorage(const DenseStorage&) {}
-    DenseStorage& operator=(const DenseStorage&) { return *this; }
-    DenseStorage(DenseIndex,DenseIndex,DenseIndex) {}
-    void swap(DenseStorage& ) {}
-    static DenseIndex rows(void) {return _Rows;}
-    static DenseIndex cols(void) {return _Cols;}
-    void conservativeResize(DenseIndex,DenseIndex,DenseIndex) {}
-    void resize(DenseIndex,DenseIndex,DenseIndex) {}
-    const T *data() const { return 0; }
-    T *data() { return 0; }
+    EIGEN_DEVICE_FUNC DenseStorage() {}
+    EIGEN_DEVICE_FUNC explicit DenseStorage(internal::constructor_without_unaligned_array_assert) {}
+    EIGEN_DEVICE_FUNC DenseStorage(const DenseStorage&) {}
+    EIGEN_DEVICE_FUNC DenseStorage& operator=(const DenseStorage&) { return *this; }
+    EIGEN_DEVICE_FUNC DenseStorage(Index,Index,Index) {}
+    EIGEN_DEVICE_FUNC void swap(DenseStorage& ) {}
+    EIGEN_DEVICE_FUNC static Index rows(void) {return _Rows;}
+    EIGEN_DEVICE_FUNC static Index cols(void) {return _Cols;}
+    EIGEN_DEVICE_FUNC void conservativeResize(Index,Index,Index) {}
+    EIGEN_DEVICE_FUNC void resize(Index,Index,Index) {}
+    EIGEN_DEVICE_FUNC const T *data() const { return 0; }
+    EIGEN_DEVICE_FUNC T *data() { return 0; }
 };
 
 // more specializations for null matrices; these are necessary to resolve ambiguities
@@ -173,74 +248,74 @@ template<typename T, int _Cols, int _Options> class DenseStorage<T, 0, Dynamic,
 template<typename T, int Size, int _Options> class DenseStorage<T, Size, Dynamic, Dynamic, _Options>
 {
     internal::plain_array<T,Size,_Options> m_data;
-    DenseIndex m_rows;
-    DenseIndex m_cols;
+    Index m_rows;
+    Index m_cols;
   public:
-    DenseStorage() : m_rows(0), m_cols(0) {}
-    DenseStorage(internal::constructor_without_unaligned_array_assert)
+    EIGEN_DEVICE_FUNC DenseStorage() : m_rows(0), m_cols(0) {}
+    EIGEN_DEVICE_FUNC explicit DenseStorage(internal::constructor_without_unaligned_array_assert)
       : m_data(internal::constructor_without_unaligned_array_assert()), m_rows(0), m_cols(0) {}
-    DenseStorage(const DenseStorage& other) : m_data(other.m_data), m_rows(other.m_rows), m_cols(other.m_cols) {}
-    DenseStorage& operator=(const DenseStorage& other)
-    {
+    EIGEN_DEVICE_FUNC DenseStorage(const DenseStorage& other) : m_data(other.m_data), m_rows(other.m_rows), m_cols(other.m_cols) {}
+    EIGEN_DEVICE_FUNC DenseStorage& operator=(const DenseStorage& other) 
+    { 
       if (this != &other)
       {
         m_data = other.m_data;
         m_rows = other.m_rows;
         m_cols = other.m_cols;
       }
-      return *this;
+      return *this; 
     }
-    DenseStorage(DenseIndex, DenseIndex nbRows, DenseIndex nbCols) : m_rows(nbRows), m_cols(nbCols) {}
-    void swap(DenseStorage& other)
+    EIGEN_DEVICE_FUNC DenseStorage(Index, Index rows, Index cols) : m_rows(rows), m_cols(cols) {}
+    EIGEN_DEVICE_FUNC void swap(DenseStorage& other)
     { std::swap(m_data,other.m_data); std::swap(m_rows,other.m_rows); std::swap(m_cols,other.m_cols); }
-    DenseIndex rows() const {return m_rows;}
-    DenseIndex cols() const {return m_cols;}
-    void conservativeResize(DenseIndex, DenseIndex nbRows, DenseIndex nbCols) { m_rows = nbRows; m_cols = nbCols; }
-    void resize(DenseIndex, DenseIndex nbRows, DenseIndex nbCols) { m_rows = nbRows; m_cols = nbCols; }
-    const T *data() const { return m_data.array; }
-    T *data() { return m_data.array; }
+    EIGEN_DEVICE_FUNC Index rows() const {return m_rows;}
+    EIGEN_DEVICE_FUNC Index cols() const {return m_cols;}
+    EIGEN_DEVICE_FUNC void conservativeResize(Index, Index rows, Index cols) { m_rows = rows; m_cols = cols; }
+    EIGEN_DEVICE_FUNC void resize(Index, Index rows, Index cols) { m_rows = rows; m_cols = cols; }
+    EIGEN_DEVICE_FUNC const T *data() const { return m_data.array; }
+    EIGEN_DEVICE_FUNC T *data() { return m_data.array; }
 };
 
 // dynamic-size matrix with fixed-size storage and fixed width
 template<typename T, int Size, int _Cols, int _Options> class DenseStorage<T, Size, Dynamic, _Cols, _Options>
 {
     internal::plain_array<T,Size,_Options> m_data;
-    DenseIndex m_rows;
+    Index m_rows;
   public:
-    DenseStorage() : m_rows(0) {}
-    DenseStorage(internal::constructor_without_unaligned_array_assert)
+    EIGEN_DEVICE_FUNC DenseStorage() : m_rows(0) {}
+    EIGEN_DEVICE_FUNC explicit DenseStorage(internal::constructor_without_unaligned_array_assert)
       : m_data(internal::constructor_without_unaligned_array_assert()), m_rows(0) {}
-    DenseStorage(const DenseStorage& other) : m_data(other.m_data), m_rows(other.m_rows) {}
-    DenseStorage& operator=(const DenseStorage& other)
+    EIGEN_DEVICE_FUNC DenseStorage(const DenseStorage& other) : m_data(other.m_data), m_rows(other.m_rows) {}
+    EIGEN_DEVICE_FUNC DenseStorage& operator=(const DenseStorage& other) 
     {
       if (this != &other)
       {
         m_data = other.m_data;
         m_rows = other.m_rows;
       }
-      return *this;
+      return *this; 
     }
-    DenseStorage(DenseIndex, DenseIndex nbRows, DenseIndex) : m_rows(nbRows) {}
-    void swap(DenseStorage& other) { std::swap(m_data,other.m_data); std::swap(m_rows,other.m_rows); }
-    DenseIndex rows(void) const {return m_rows;}
-    DenseIndex cols(void) const {return _Cols;}
-    void conservativeResize(DenseIndex, DenseIndex nbRows, DenseIndex) { m_rows = nbRows; }
-    void resize(DenseIndex, DenseIndex nbRows, DenseIndex) { m_rows = nbRows; }
-    const T *data() const { return m_data.array; }
-    T *data() { return m_data.array; }
+    EIGEN_DEVICE_FUNC DenseStorage(Index, Index rows, Index) : m_rows(rows) {}
+    EIGEN_DEVICE_FUNC void swap(DenseStorage& other) { std::swap(m_data,other.m_data); std::swap(m_rows,other.m_rows); }
+    EIGEN_DEVICE_FUNC Index rows(void) const {return m_rows;}
+    EIGEN_DEVICE_FUNC Index cols(void) const {return _Cols;}
+    EIGEN_DEVICE_FUNC void conservativeResize(Index, Index rows, Index) { m_rows = rows; }
+    EIGEN_DEVICE_FUNC void resize(Index, Index rows, Index) { m_rows = rows; }
+    EIGEN_DEVICE_FUNC const T *data() const { return m_data.array; }
+    EIGEN_DEVICE_FUNC T *data() { return m_data.array; }
 };
 
 // dynamic-size matrix with fixed-size storage and fixed height
 template<typename T, int Size, int _Rows, int _Options> class DenseStorage<T, Size, _Rows, Dynamic, _Options>
 {
     internal::plain_array<T,Size,_Options> m_data;
-    DenseIndex m_cols;
+    Index m_cols;
   public:
-    DenseStorage() : m_cols(0) {}
-    DenseStorage(internal::constructor_without_unaligned_array_assert)
+    EIGEN_DEVICE_FUNC DenseStorage() : m_cols(0) {}
+    EIGEN_DEVICE_FUNC explicit DenseStorage(internal::constructor_without_unaligned_array_assert)
       : m_data(internal::constructor_without_unaligned_array_assert()), m_cols(0) {}
-    DenseStorage(const DenseStorage& other) : m_data(other.m_data), m_cols(other.m_cols) {}
-    DenseStorage& operator=(const DenseStorage& other)
+    EIGEN_DEVICE_FUNC DenseStorage(const DenseStorage& other) : m_data(other.m_data), m_cols(other.m_cols) {}
+    EIGEN_DEVICE_FUNC DenseStorage& operator=(const DenseStorage& other)
     {
       if (this != &other)
       {
@@ -249,38 +324,62 @@ template<typename T, int Size, int _Rows, int _Options> class DenseStorage<T, Si
       }
       return *this;
     }
-    DenseStorage(DenseIndex, DenseIndex, DenseIndex nbCols) : m_cols(nbCols) {}
-    void swap(DenseStorage& other) { std::swap(m_data,other.m_data); std::swap(m_cols,other.m_cols); }
-    DenseIndex rows(void) const {return _Rows;}
-    DenseIndex cols(void) const {return m_cols;}
-    void conservativeResize(DenseIndex, DenseIndex, DenseIndex nbCols) { m_cols = nbCols; }
-    void resize(DenseIndex, DenseIndex, DenseIndex nbCols) { m_cols = nbCols; }
-    const T *data() const { return m_data.array; }
-    T *data() { return m_data.array; }
+    EIGEN_DEVICE_FUNC DenseStorage(Index, Index, Index cols) : m_cols(cols) {}
+    EIGEN_DEVICE_FUNC void swap(DenseStorage& other) { std::swap(m_data,other.m_data); std::swap(m_cols,other.m_cols); }
+    EIGEN_DEVICE_FUNC Index rows(void) const {return _Rows;}
+    EIGEN_DEVICE_FUNC Index cols(void) const {return m_cols;}
+    void conservativeResize(Index, Index, Index cols) { m_cols = cols; }
+    void resize(Index, Index, Index cols) { m_cols = cols; }
+    EIGEN_DEVICE_FUNC const T *data() const { return m_data.array; }
+    EIGEN_DEVICE_FUNC T *data() { return m_data.array; }
 };
 
 // purely dynamic matrix.
 template<typename T, int _Options> class DenseStorage<T, Dynamic, Dynamic, Dynamic, _Options>
 {
     T *m_data;
-    DenseIndex m_rows;
-    DenseIndex m_cols;
+    Index m_rows;
+    Index m_cols;
   public:
-    DenseStorage() : m_data(0), m_rows(0), m_cols(0) {}
-    DenseStorage(internal::constructor_without_unaligned_array_assert)
+    EIGEN_DEVICE_FUNC DenseStorage() : m_data(0), m_rows(0), m_cols(0) {}
+    EIGEN_DEVICE_FUNC explicit DenseStorage(internal::constructor_without_unaligned_array_assert)
        : m_data(0), m_rows(0), m_cols(0) {}
-    DenseStorage(DenseIndex size, DenseIndex nbRows, DenseIndex nbCols)
-      : m_data(internal::conditional_aligned_new_auto<T,(_Options&DontAlign)==0>(size)), m_rows(nbRows), m_cols(nbCols)
-    { EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN }
-#ifdef EIGEN_HAVE_RVALUE_REFERENCES
-    DenseStorage(DenseStorage&& other)
+    EIGEN_DEVICE_FUNC DenseStorage(Index size, Index rows, Index cols)
+      : m_data(internal::conditional_aligned_new_auto<T,(_Options&DontAlign)==0>(size)), m_rows(rows), m_cols(cols)
+    {
+      EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN({})
+      eigen_internal_assert(size==rows*cols && rows>=0 && cols >=0);
+    }
+    EIGEN_DEVICE_FUNC DenseStorage(const DenseStorage& other)
+      : m_data(internal::conditional_aligned_new_auto<T,(_Options&DontAlign)==0>(other.m_rows*other.m_cols))
+      , m_rows(other.m_rows)
+      , m_cols(other.m_cols)
+    {
+      EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN(Index size = m_rows*m_cols)
+      internal::smart_copy(other.m_data, other.m_data+other.m_rows*other.m_cols, m_data);
+    }
+    EIGEN_DEVICE_FUNC DenseStorage& operator=(const DenseStorage& other)
+    {
+      if (this != &other)
+      {
+        DenseStorage tmp(other);
+        this->swap(tmp);
+      }
+      return *this;
+    }
+#if EIGEN_HAS_RVALUE_REFERENCES
+    EIGEN_DEVICE_FUNC
+    DenseStorage(DenseStorage&& other) EIGEN_NOEXCEPT
       : m_data(std::move(other.m_data))
       , m_rows(std::move(other.m_rows))
       , m_cols(std::move(other.m_cols))
     {
       other.m_data = nullptr;
+      other.m_rows = 0;
+      other.m_cols = 0;
     }
-    DenseStorage& operator=(DenseStorage&& other)
+    EIGEN_DEVICE_FUNC
+    DenseStorage& operator=(DenseStorage&& other) EIGEN_NOEXCEPT
     {
       using std::swap;
       swap(m_data, other.m_data);
@@ -289,18 +388,18 @@ template<typename T, int _Options> class DenseStorage<T, Dynamic, Dynamic, Dynam
       return *this;
     }
 #endif
-    ~DenseStorage() { internal::conditional_aligned_delete_auto<T,(_Options&DontAlign)==0>(m_data, m_rows*m_cols); }
-    void swap(DenseStorage& other)
+    EIGEN_DEVICE_FUNC ~DenseStorage() { internal::conditional_aligned_delete_auto<T,(_Options&DontAlign)==0>(m_data, m_rows*m_cols); }
+    EIGEN_DEVICE_FUNC void swap(DenseStorage& other)
     { std::swap(m_data,other.m_data); std::swap(m_rows,other.m_rows); std::swap(m_cols,other.m_cols); }
-    DenseIndex rows(void) const {return m_rows;}
-    DenseIndex cols(void) const {return m_cols;}
-    void conservativeResize(DenseIndex size, DenseIndex nbRows, DenseIndex nbCols)
+    EIGEN_DEVICE_FUNC Index rows(void) const {return m_rows;}
+    EIGEN_DEVICE_FUNC Index cols(void) const {return m_cols;}
+    void conservativeResize(Index size, Index rows, Index cols)
     {
       m_data = internal::conditional_aligned_realloc_new_auto<T,(_Options&DontAlign)==0>(m_data, size, m_rows*m_cols);
-      m_rows = nbRows;
-      m_cols = nbCols;
+      m_rows = rows;
+      m_cols = cols;
     }
-    void resize(DenseIndex size, DenseIndex nbRows, DenseIndex nbCols)
+    EIGEN_DEVICE_FUNC void resize(Index size, Index rows, Index cols)
     {
       if(size != m_rows*m_cols)
       {
@@ -309,36 +408,56 @@ template<typename T, int _Options> class DenseStorage<T, Dynamic, Dynamic, Dynam
           m_data = internal::conditional_aligned_new_auto<T,(_Options&DontAlign)==0>(size);
         else
           m_data = 0;
-        EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN
+        EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN({})
       }
-      m_rows = nbRows;
-      m_cols = nbCols;
+      m_rows = rows;
+      m_cols = cols;
     }
-    const T *data() const { return m_data; }
-    T *data() { return m_data; }
-  private:
-    DenseStorage(const DenseStorage&);
-    DenseStorage& operator=(const DenseStorage&);
+    EIGEN_DEVICE_FUNC const T *data() const { return m_data; }
+    EIGEN_DEVICE_FUNC T *data() { return m_data; }
 };
 
 // matrix with dynamic width and fixed height (so that matrix has dynamic size).
 template<typename T, int _Rows, int _Options> class DenseStorage<T, Dynamic, _Rows, Dynamic, _Options>
 {
     T *m_data;
-    DenseIndex m_cols;
+    Index m_cols;
   public:
-    DenseStorage() : m_data(0), m_cols(0) {}
-    DenseStorage(internal::constructor_without_unaligned_array_assert) : m_data(0), m_cols(0) {}
-    DenseStorage(DenseIndex size, DenseIndex, DenseIndex nbCols) : m_data(internal::conditional_aligned_new_auto<T,(_Options&DontAlign)==0>(size)), m_cols(nbCols)
-    { EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN }
-#ifdef EIGEN_HAVE_RVALUE_REFERENCES
-    DenseStorage(DenseStorage&& other)
+    EIGEN_DEVICE_FUNC DenseStorage() : m_data(0), m_cols(0) {}
+    explicit DenseStorage(internal::constructor_without_unaligned_array_assert) : m_data(0), m_cols(0) {}
+    EIGEN_DEVICE_FUNC DenseStorage(Index size, Index rows, Index cols) : m_data(internal::conditional_aligned_new_auto<T,(_Options&DontAlign)==0>(size)), m_cols(cols)
+    {
+      EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN({})
+      eigen_internal_assert(size==rows*cols && rows==_Rows && cols >=0);
+      EIGEN_UNUSED_VARIABLE(rows);
+    }
+    EIGEN_DEVICE_FUNC DenseStorage(const DenseStorage& other)
+      : m_data(internal::conditional_aligned_new_auto<T,(_Options&DontAlign)==0>(_Rows*other.m_cols))
+      , m_cols(other.m_cols)
+    {
+      EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN(Index size = m_cols*_Rows)
+      internal::smart_copy(other.m_data, other.m_data+_Rows*m_cols, m_data);
+    }
+    EIGEN_DEVICE_FUNC DenseStorage& operator=(const DenseStorage& other)
+    {
+      if (this != &other)
+      {
+        DenseStorage tmp(other);
+        this->swap(tmp);
+      }
+      return *this;
+    }    
+#if EIGEN_HAS_RVALUE_REFERENCES
+    EIGEN_DEVICE_FUNC
+    DenseStorage(DenseStorage&& other) EIGEN_NOEXCEPT
       : m_data(std::move(other.m_data))
       , m_cols(std::move(other.m_cols))
     {
       other.m_data = nullptr;
+      other.m_cols = 0;
     }
-    DenseStorage& operator=(DenseStorage&& other)
+    EIGEN_DEVICE_FUNC
+    DenseStorage& operator=(DenseStorage&& other) EIGEN_NOEXCEPT
     {
       using std::swap;
       swap(m_data, other.m_data);
@@ -346,16 +465,16 @@ template<typename T, int _Rows, int _Options> class DenseStorage<T, Dynamic, _Ro
       return *this;
     }
 #endif
-    ~DenseStorage() { internal::conditional_aligned_delete_auto<T,(_Options&DontAlign)==0>(m_data, _Rows*m_cols); }
-    void swap(DenseStorage& other) { std::swap(m_data,other.m_data); std::swap(m_cols,other.m_cols); }
-    static DenseIndex rows(void) {return _Rows;}
-    DenseIndex cols(void) const {return m_cols;}
-    void conservativeResize(DenseIndex size, DenseIndex, DenseIndex nbCols)
+    EIGEN_DEVICE_FUNC ~DenseStorage() { internal::conditional_aligned_delete_auto<T,(_Options&DontAlign)==0>(m_data, _Rows*m_cols); }
+    EIGEN_DEVICE_FUNC void swap(DenseStorage& other) { std::swap(m_data,other.m_data); std::swap(m_cols,other.m_cols); }
+    EIGEN_DEVICE_FUNC static Index rows(void) {return _Rows;}
+    EIGEN_DEVICE_FUNC Index cols(void) const {return m_cols;}
+    EIGEN_DEVICE_FUNC void conservativeResize(Index size, Index, Index cols)
     {
       m_data = internal::conditional_aligned_realloc_new_auto<T,(_Options&DontAlign)==0>(m_data, size, _Rows*m_cols);
-      m_cols = nbCols;
+      m_cols = cols;
     }
-    EIGEN_STRONG_INLINE void resize(DenseIndex size, DenseIndex, DenseIndex nbCols)
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void resize(Index size, Index, Index cols)
     {
       if(size != _Rows*m_cols)
       {
@@ -364,35 +483,55 @@ template<typename T, int _Rows, int _Options> class DenseStorage<T, Dynamic, _Ro
           m_data = internal::conditional_aligned_new_auto<T,(_Options&DontAlign)==0>(size);
         else
           m_data = 0;
-        EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN
+        EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN({})
       }
-      m_cols = nbCols;
+      m_cols = cols;
     }
-    const T *data() const { return m_data; }
-    T *data() { return m_data; }
-  private:
-    DenseStorage(const DenseStorage&);
-    DenseStorage& operator=(const DenseStorage&);
+    EIGEN_DEVICE_FUNC const T *data() const { return m_data; }
+    EIGEN_DEVICE_FUNC T *data() { return m_data; }
 };
 
 // matrix with dynamic height and fixed width (so that matrix has dynamic size).
 template<typename T, int _Cols, int _Options> class DenseStorage<T, Dynamic, Dynamic, _Cols, _Options>
 {
     T *m_data;
-    DenseIndex m_rows;
+    Index m_rows;
   public:
-    DenseStorage() : m_data(0), m_rows(0) {}
-    DenseStorage(internal::constructor_without_unaligned_array_assert) : m_data(0), m_rows(0) {}
-    DenseStorage(DenseIndex size, DenseIndex nbRows, DenseIndex) : m_data(internal::conditional_aligned_new_auto<T,(_Options&DontAlign)==0>(size)), m_rows(nbRows)
-    { EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN }
-#ifdef EIGEN_HAVE_RVALUE_REFERENCES
-    DenseStorage(DenseStorage&& other)
+    EIGEN_DEVICE_FUNC DenseStorage() : m_data(0), m_rows(0) {}
+    explicit DenseStorage(internal::constructor_without_unaligned_array_assert) : m_data(0), m_rows(0) {}
+    EIGEN_DEVICE_FUNC DenseStorage(Index size, Index rows, Index cols) : m_data(internal::conditional_aligned_new_auto<T,(_Options&DontAlign)==0>(size)), m_rows(rows)
+    {
+      EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN({})
+      eigen_internal_assert(size==rows*cols && rows>=0 && cols == _Cols);
+      EIGEN_UNUSED_VARIABLE(cols);
+    }
+    EIGEN_DEVICE_FUNC DenseStorage(const DenseStorage& other)
+      : m_data(internal::conditional_aligned_new_auto<T,(_Options&DontAlign)==0>(other.m_rows*_Cols))
+      , m_rows(other.m_rows)
+    {
+      EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN(Index size = m_rows*_Cols)
+      internal::smart_copy(other.m_data, other.m_data+other.m_rows*_Cols, m_data);
+    }
+    EIGEN_DEVICE_FUNC DenseStorage& operator=(const DenseStorage& other)
+    {
+      if (this != &other)
+      {
+        DenseStorage tmp(other);
+        this->swap(tmp);
+      }
+      return *this;
+    }    
+#if EIGEN_HAS_RVALUE_REFERENCES
+    EIGEN_DEVICE_FUNC
+    DenseStorage(DenseStorage&& other) EIGEN_NOEXCEPT
       : m_data(std::move(other.m_data))
       , m_rows(std::move(other.m_rows))
     {
       other.m_data = nullptr;
+      other.m_rows = 0;
     }
-    DenseStorage& operator=(DenseStorage&& other)
+    EIGEN_DEVICE_FUNC
+    DenseStorage& operator=(DenseStorage&& other) EIGEN_NOEXCEPT
     {
       using std::swap;
       swap(m_data, other.m_data);
@@ -400,16 +539,16 @@ template<typename T, int _Cols, int _Options> class DenseStorage<T, Dynamic, Dyn
       return *this;
     }
 #endif
-    ~DenseStorage() { internal::conditional_aligned_delete_auto<T,(_Options&DontAlign)==0>(m_data, _Cols*m_rows); }
-    void swap(DenseStorage& other) { std::swap(m_data,other.m_data); std::swap(m_rows,other.m_rows); }
-    DenseIndex rows(void) const {return m_rows;}
-    static DenseIndex cols(void) {return _Cols;}
-    void conservativeResize(DenseIndex size, DenseIndex nbRows, DenseIndex)
+    EIGEN_DEVICE_FUNC ~DenseStorage() { internal::conditional_aligned_delete_auto<T,(_Options&DontAlign)==0>(m_data, _Cols*m_rows); }
+    EIGEN_DEVICE_FUNC void swap(DenseStorage& other) { std::swap(m_data,other.m_data); std::swap(m_rows,other.m_rows); }
+    EIGEN_DEVICE_FUNC Index rows(void) const {return m_rows;}
+    EIGEN_DEVICE_FUNC static Index cols(void) {return _Cols;}
+    void conservativeResize(Index size, Index rows, Index)
     {
       m_data = internal::conditional_aligned_realloc_new_auto<T,(_Options&DontAlign)==0>(m_data, size, m_rows*_Cols);
-      m_rows = nbRows;
+      m_rows = rows;
     }
-    EIGEN_STRONG_INLINE void resize(DenseIndex size, DenseIndex nbRows, DenseIndex)
+    EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void resize(Index size, Index rows, Index)
     {
       if(size != m_rows*_Cols)
       {
@@ -418,15 +557,12 @@ template<typename T, int _Cols, int _Options> class DenseStorage<T, Dynamic, Dyn
           m_data = internal::conditional_aligned_new_auto<T,(_Options&DontAlign)==0>(size);
         else
           m_data = 0;
-        EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN
+        EIGEN_INTERNAL_DENSE_STORAGE_CTOR_PLUGIN({})
       }
-      m_rows = nbRows;
+      m_rows = rows;
     }
-    const T *data() const { return m_data; }
-    T *data() { return m_data; }
-  private:
-    DenseStorage(const DenseStorage&);
-    DenseStorage& operator=(const DenseStorage&);
+    EIGEN_DEVICE_FUNC const T *data() const { return m_data; }
+    EIGEN_DEVICE_FUNC T *data() { return m_data; }
 };
 
 } // end namespace Eigen

extern/Eigen3/Eigen/src/Core/Diagonal.h

@@ -21,7 +21,7 @@ namespace Eigen {
   * \param MatrixType the type of the object in which we are taking a sub/main/super diagonal
   * \param DiagIndex the index of the sub/super diagonal. The default is 0 and it means the main diagonal.
   *              A positive value means a superdiagonal, a negative value means a subdiagonal.
-  *              You can also use Dynamic so the index can be set at runtime.
+  *              You can also use DynamicIndex so the index can be set at runtime.
   *
   * The matrix is not required to be square.
   *
@@ -37,7 +37,7 @@ template<typename MatrixType, int DiagIndex>
 struct traits<Diagonal<MatrixType,DiagIndex> >
  : traits<MatrixType>
 {
-  typedef typename nested<MatrixType>::type MatrixTypeNested;
+  typedef typename ref_selector<MatrixType>::type MatrixTypeNested;
   typedef typename remove_reference<MatrixTypeNested>::type _MatrixTypeNested;
   typedef typename MatrixType::StorageKind StorageKind;
   enum {
@@ -52,8 +52,7 @@ struct traits<Diagonal<MatrixType,DiagIndex> >
                                                  MatrixType::MaxColsAtCompileTime - EIGEN_PLAIN_ENUM_MAX( DiagIndex, 0))),
     MaxColsAtCompileTime = 1,
     MaskLvalueBit = is_lvalue<MatrixType>::value ? LvalueBit : 0,
-    Flags = (unsigned int)_MatrixTypeNested::Flags & (HereditaryBits | LinearAccessBit | MaskLvalueBit | DirectAccessBit) & ~RowMajorBit,
-    CoeffReadCost = _MatrixTypeNested::CoeffReadCost,
+    Flags = (unsigned int)_MatrixTypeNested::Flags & (RowMajorBit | MaskLvalueBit | DirectAccessBit) & ~RowMajorBit, // FIXME DirectAccessBit should not be handled by expressions
     MatrixTypeOuterStride = outer_stride_at_compile_time<MatrixType>::ret,
     InnerStrideAtCompileTime = MatrixTypeOuterStride == Dynamic ? Dynamic : MatrixTypeOuterStride+1,
     OuterStrideAtCompileTime = 0
@@ -70,20 +69,31 @@ template<typename MatrixType, int _DiagIndex> class Diagonal
     typedef typename internal::dense_xpr_base<Diagonal>::type Base;
     EIGEN_DENSE_PUBLIC_INTERFACE(Diagonal)
 
-    inline Diagonal(MatrixType& matrix, Index a_index = DiagIndex) : m_matrix(matrix), m_index(a_index) {}
+    EIGEN_DEVICE_FUNC
+    explicit inline Diagonal(MatrixType& matrix, Index a_index = DiagIndex) : m_matrix(matrix), m_index(a_index)
+    {
+      eigen_assert( a_index <= m_matrix.cols() && -a_index <= m_matrix.rows() );
+    }
 
     EIGEN_INHERIT_ASSIGNMENT_OPERATORS(Diagonal)
 
+    EIGEN_DEVICE_FUNC
     inline Index rows() const
-    { return m_index.value()<0 ? (std::min<Index>)(m_matrix.cols(),m_matrix.rows()+m_index.value()) : (std::min<Index>)(m_matrix.rows(),m_matrix.cols()-m_index.value()); }
+    {
+      return m_index.value()<0 ? numext::mini<Index>(m_matrix.cols(),m_matrix.rows()+m_index.value())
+                               : numext::mini<Index>(m_matrix.rows(),m_matrix.cols()-m_index.value());
+    }
 
+    EIGEN_DEVICE_FUNC
     inline Index cols() const { return 1; }
 
+    EIGEN_DEVICE_FUNC
     inline Index innerStride() const
     {
       return m_matrix.outerStride() + 1;
     }
 
+    EIGEN_DEVICE_FUNC
     inline Index outerStride() const
     {
       return 0;
@@ -95,62 +105,75 @@ template<typename MatrixType, int _DiagIndex> class Diagonal
                        const Scalar
                      >::type ScalarWithConstIfNotLvalue;
 
-    inline ScalarWithConstIfNotLvalue* data() { return &(m_matrix.const_cast_derived().coeffRef(rowOffset(), colOffset())); }
-    inline const Scalar* data() const { return &(m_matrix.const_cast_derived().coeffRef(rowOffset(), colOffset())); }
+    EIGEN_DEVICE_FUNC
+    inline ScalarWithConstIfNotLvalue* data() { return &(m_matrix.coeffRef(rowOffset(), colOffset())); }
+    EIGEN_DEVICE_FUNC
+    inline const Scalar* data() const { return &(m_matrix.coeffRef(rowOffset(), colOffset())); }
 
+    EIGEN_DEVICE_FUNC
     inline Scalar& coeffRef(Index row, Index)
     {
       EIGEN_STATIC_ASSERT_LVALUE(MatrixType)
-      return m_matrix.const_cast_derived().coeffRef(row+rowOffset(), row+colOffset());
+      return m_matrix.coeffRef(row+rowOffset(), row+colOffset());
     }
 
+    EIGEN_DEVICE_FUNC
     inline const Scalar& coeffRef(Index row, Index) const
     {
-      return m_matrix.const_cast_derived().coeffRef(row+rowOffset(), row+colOffset());
+      return m_matrix.coeffRef(row+rowOffset(), row+colOffset());
     }
 
+    EIGEN_DEVICE_FUNC
     inline CoeffReturnType coeff(Index row, Index) const
     {
       return m_matrix.coeff(row+rowOffset(), row+colOffset());
     }
 
+    EIGEN_DEVICE_FUNC
     inline Scalar& coeffRef(Index idx)
     {
       EIGEN_STATIC_ASSERT_LVALUE(MatrixType)
-      return m_matrix.const_cast_derived().coeffRef(idx+rowOffset(), idx+colOffset());
+      return m_matrix.coeffRef(idx+rowOffset(), idx+colOffset());
     }
 
+    EIGEN_DEVICE_FUNC
     inline const Scalar& coeffRef(Index idx) const
     {
-      return m_matrix.const_cast_derived().coeffRef(idx+rowOffset(), idx+colOffset());
+      return m_matrix.coeffRef(idx+rowOffset(), idx+colOffset());
     }
 
+    EIGEN_DEVICE_FUNC
     inline CoeffReturnType coeff(Index idx) const
     {
       return m_matrix.coeff(idx+rowOffset(), idx+colOffset());
     }
 
-    const typename internal::remove_all<typename MatrixType::Nested>::type& 
+    EIGEN_DEVICE_FUNC
+    inline const typename internal::remove_all<typename MatrixType::Nested>::type& 
     nestedExpression() const 
     {
       return m_matrix;
     }
 
-    int index() const
+    EIGEN_DEVICE_FUNC
+    inline Index index() const
     {
       return m_index.value();
     }
 
   protected:
-    typename MatrixType::Nested m_matrix;
+    typename internal::ref_selector<MatrixType>::non_const_type m_matrix;
     const internal::variable_if_dynamicindex<Index, DiagIndex> m_index;
 
   private:
     // some compilers may fail to optimize std::max etc in case of compile-time constants...
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Index absDiagIndex() const { return m_index.value()>0 ? m_index.value() : -m_index.value(); }
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Index rowOffset() const { return m_index.value()>0 ? 0 : -m_index.value(); }
+    EIGEN_DEVICE_FUNC
     EIGEN_STRONG_INLINE Index colOffset() const { return m_index.value()>0 ? m_index.value() : 0; }
-    // triger a compile time error is someone try to call packet
+    // trigger a compile-time error if someone try to call packet
     template<int LoadMode> typename MatrixType::PacketReturnType packet(Index) const;
     template<int LoadMode> typename MatrixType::PacketReturnType packet(Index,Index) const;
 };
@@ -167,7 +190,7 @@ template<typename Derived>
 inline typename MatrixBase<Derived>::DiagonalReturnType
 MatrixBase<Derived>::diagonal()
 {
-  return derived();
+  return DiagonalReturnType(derived());
 }
 
 /** This is the const version of diagonal(). */
@@ -216,20 +239,20 @@ MatrixBase<Derived>::diagonal(Index index) const
   *
   * \sa MatrixBase::diagonal(), class Diagonal */
 template<typename Derived>
-template<int Index>
-inline typename MatrixBase<Derived>::template DiagonalIndexReturnType<Index>::Type
+template<int Index_>
+inline typename MatrixBase<Derived>::template DiagonalIndexReturnType<Index_>::Type
 MatrixBase<Derived>::diagonal()
 {
-  return derived();
+  return typename DiagonalIndexReturnType<Index_>::Type(derived());
 }
 
 /** This is the const version of diagonal<int>(). */
 template<typename Derived>
-template<int Index>
-inline typename MatrixBase<Derived>::template ConstDiagonalIndexReturnType<Index>::Type
+template<int Index_>
+inline typename MatrixBase<Derived>::template ConstDiagonalIndexReturnType<Index_>::Type
 MatrixBase<Derived>::diagonal() const
 {
-  return derived();
+  return typename ConstDiagonalIndexReturnType<Index_>::Type(derived());
 }
 
 } // end namespace Eigen

extern/Eigen3/Eigen/src/Core/DiagonalMatrix.h

@@ -22,7 +22,7 @@ class DiagonalBase : public EigenBase<Derived>
     typedef typename DiagonalVectorType::Scalar Scalar;
     typedef typename DiagonalVectorType::RealScalar RealScalar;
     typedef typename internal::traits<Derived>::StorageKind StorageKind;
-    typedef typename internal::traits<Derived>::Index Index;
+    typedef typename internal::traits<Derived>::StorageIndex StorageIndex;
 
     enum {
       RowsAtCompileTime = DiagonalVectorType::SizeAtCompileTime,
@@ -30,79 +30,61 @@ class DiagonalBase : public EigenBase<Derived>
       MaxRowsAtCompileTime = DiagonalVectorType::MaxSizeAtCompileTime,
       MaxColsAtCompileTime = DiagonalVectorType::MaxSizeAtCompileTime,
       IsVectorAtCompileTime = 0,
-      Flags = 0
+      Flags = NoPreferredStorageOrderBit
     };
 
     typedef Matrix<Scalar, RowsAtCompileTime, ColsAtCompileTime, 0, MaxRowsAtCompileTime, MaxColsAtCompileTime> DenseMatrixType;
     typedef DenseMatrixType DenseType;
     typedef DiagonalMatrix<Scalar,DiagonalVectorType::SizeAtCompileTime,DiagonalVectorType::MaxSizeAtCompileTime> PlainObject;
 
+    EIGEN_DEVICE_FUNC
     inline const Derived& derived() const { return *static_cast<const Derived*>(this); }
+    EIGEN_DEVICE_FUNC
     inline Derived& derived() { return *static_cast<Derived*>(this); }
 
+    EIGEN_DEVICE_FUNC
     DenseMatrixType toDenseMatrix() const { return derived(); }
-    template<typename DenseDerived>
-    void evalTo(MatrixBase<DenseDerived> &other) const;
-    template<typename DenseDerived>
-    void addTo(MatrixBase<DenseDerived> &other) const
-    { other.diagonal() += diagonal(); }
-    template<typename DenseDerived>
-    void subTo(MatrixBase<DenseDerived> &other) const
-    { other.diagonal() -= diagonal(); }
-
+    
+    EIGEN_DEVICE_FUNC
     inline const DiagonalVectorType& diagonal() const { return derived().diagonal(); }
+    EIGEN_DEVICE_FUNC
     inline DiagonalVectorType& diagonal() { return derived().diagonal(); }
 
+    EIGEN_DEVICE_FUNC
     inline Index rows() const { return diagonal().size(); }
+    EIGEN_DEVICE_FUNC
     inline Index cols() const { return diagonal().size(); }
 
-    /** \returns the diagonal matrix product of \c *this by the matrix \a matrix.
-      */
     template<typename MatrixDerived>
-    const DiagonalProduct<MatrixDerived, Derived, OnTheLeft>
+    EIGEN_DEVICE_FUNC
+    const Product<Derived,MatrixDerived,LazyProduct>
     operator*(const MatrixBase<MatrixDerived> &matrix) const
     {
-      return DiagonalProduct<MatrixDerived, Derived, OnTheLeft>(matrix.derived(), derived());
+      return Product<Derived, MatrixDerived, LazyProduct>(derived(),matrix.derived());
     }
 
-    inline const DiagonalWrapper<const CwiseUnaryOp<internal::scalar_inverse_op<Scalar>, const DiagonalVectorType> >
+    typedef DiagonalWrapper<const CwiseUnaryOp<internal::scalar_inverse_op<Scalar>, const DiagonalVectorType> > InverseReturnType;
+    EIGEN_DEVICE_FUNC
+    inline const InverseReturnType
     inverse() const
     {
-      return diagonal().cwiseInverse();
+      return InverseReturnType(diagonal().cwiseInverse());
     }
     
-    inline const DiagonalWrapper<const CwiseUnaryOp<internal::scalar_multiple_op<Scalar>, const DiagonalVectorType> >
+    EIGEN_DEVICE_FUNC
+    inline const DiagonalWrapper<const EIGEN_EXPR_BINARYOP_SCALAR_RETURN_TYPE(DiagonalVectorType,Scalar,product) >
     operator*(const Scalar& scalar) const
     {
-      return diagonal() * scalar;
+      return DiagonalWrapper<const EIGEN_EXPR_BINARYOP_SCALAR_RETURN_TYPE(DiagonalVectorType,Scalar,product) >(diagonal() * scalar);
     }
-    friend inline const DiagonalWrapper<const CwiseUnaryOp<internal::scalar_multiple_op<Scalar>, const DiagonalVectorType> >
+    EIGEN_DEVICE_FUNC
+    friend inline const DiagonalWrapper<const EIGEN_SCALAR_BINARYOP_EXPR_RETURN_TYPE(Scalar,DiagonalVectorType,product) >
     operator*(const Scalar& scalar, const DiagonalBase& other)
     {
-      return other.diagonal() * scalar;
+      return DiagonalWrapper<const EIGEN_SCALAR_BINARYOP_EXPR_RETURN_TYPE(Scalar,DiagonalVectorType,product) >(scalar * other.diagonal());
     }
-    
-    #ifdef EIGEN2_SUPPORT
-    template<typename OtherDerived>
-    bool isApprox(const DiagonalBase<OtherDerived>& other, typename NumTraits<Scalar>::Real precision = NumTraits<Scalar>::dummy_precision()) const
-    {
-      return diagonal().isApprox(other.diagonal(), precision);
-    }
-    template<typename OtherDerived>
-    bool isApprox(const MatrixBase<OtherDerived>& other, typename NumTraits<Scalar>::Real precision = NumTraits<Scalar>::dummy_precision()) const
-    {
-      return toDenseMatrix().isApprox(other, precision);
-    }
-    #endif
 };
 
-template<typename Derived>
-template<typename DenseDerived>
-void DiagonalBase<Derived>::evalTo(MatrixBase<DenseDerived> &other) const
-{
-  other.setZero();
-  other.diagonal() = diagonal();
-}
 #endif
 
 /** \class DiagonalMatrix
@@ -124,10 +106,9 @@ struct traits<DiagonalMatrix<_Scalar,SizeAtCompileTime,MaxSizeAtCompileTime> >
  : traits<Matrix<_Scalar,SizeAtCompileTime,SizeAtCompileTime,0,MaxSizeAtCompileTime,MaxSizeAtCompileTime> >
 {
   typedef Matrix<_Scalar,SizeAtCompileTime,1,0,MaxSizeAtCompileTime,1> DiagonalVectorType;
-  typedef Dense StorageKind;
-  typedef DenseIndex Index;
+  typedef DiagonalShape StorageKind;
   enum {
-    Flags = LvalueBit
+    Flags = LvalueBit | NoPreferredStorageOrderBit
   };
 };
 }
@@ -141,7 +122,7 @@ class DiagonalMatrix
     typedef const DiagonalMatrix& Nested;
     typedef _Scalar Scalar;
     typedef typename internal::traits<DiagonalMatrix>::StorageKind StorageKind;
-    typedef typename internal::traits<DiagonalMatrix>::Index Index;
+    typedef typename internal::traits<DiagonalMatrix>::StorageIndex StorageIndex;
     #endif
 
   protected:
@@ -151,24 +132,31 @@ class DiagonalMatrix
   public:
 
     /** const version of diagonal(). */
+    EIGEN_DEVICE_FUNC
     inline const DiagonalVectorType& diagonal() const { return m_diagonal; }
     /** \returns a reference to the stored vector of diagonal coefficients. */
+    EIGEN_DEVICE_FUNC
     inline DiagonalVectorType& diagonal() { return m_diagonal; }
 
     /** Default constructor without initialization */
+    EIGEN_DEVICE_FUNC
     inline DiagonalMatrix() {}
 
     /** Constructs a diagonal matrix with given dimension  */
-    inline DiagonalMatrix(Index dim) : m_diagonal(dim) {}
+    EIGEN_DEVICE_FUNC
+    explicit inline DiagonalMatrix(Index dim) : m_diagonal(dim) {}
 
     /** 2D constructor. */
+    EIGEN_DEVICE_FUNC
     inline DiagonalMatrix(const Scalar& x, const Scalar& y) : m_diagonal(x,y) {}
 
     /** 3D constructor. */
+    EIGEN_DEVICE_FUNC
     inline DiagonalMatrix(const Scalar& x, const Scalar& y, const Scalar& z) : m_diagonal(x,y,z) {}
 
     /** Copy constructor. */
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC
     inline DiagonalMatrix(const DiagonalBase<OtherDerived>& other) : m_diagonal(other.diagonal()) {}
 
     #ifndef EIGEN_PARSED_BY_DOXYGEN
@@ -178,11 +166,13 @@ class DiagonalMatrix
 
     /** generic constructor from expression of the diagonal coefficients */
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC
     explicit inline DiagonalMatrix(const MatrixBase<OtherDerived>& other) : m_diagonal(other)
     {}
 
     /** Copy operator. */
     template<typename OtherDerived>
+    EIGEN_DEVICE_FUNC
     DiagonalMatrix& operator=(const DiagonalBase<OtherDerived>& other)
     {
       m_diagonal = other.diagonal();
@@ -193,6 +183,7 @@ class DiagonalMatrix
     /** This is a special case of the templated operator=. Its purpose is to
       * prevent a default operator= from hiding the templated operator=.
       */
+    EIGEN_DEVICE_FUNC
     DiagonalMatrix& operator=(const DiagonalMatrix& other)
     {
       m_diagonal = other.diagonal();
@@ -201,14 +192,19 @@ class DiagonalMatrix
     #endif
 
     /** Resizes to given size. */
+    EIGEN_DEVICE_FUNC
     inline void resize(Index size) { m_diagonal.resize(size); }
     /** Sets all coefficients to zero. */
+    EIGEN_DEVICE_FUNC
     inline void setZero() { m_diagonal.setZero(); }
     /** Resizes and sets all coefficients to zero. */
+    EIGEN_DEVICE_FUNC
     inline void setZero(Index size) { m_diagonal.setZero(size); }
     /** Sets this matrix to be the identity matrix of the current size. */
+    EIGEN_DEVICE_FUNC
     inline void setIdentity() { m_diagonal.setOnes(); }
     /** Sets this matrix to be the identity matrix of the given size. */
+    EIGEN_DEVICE_FUNC
     inline void setIdentity(Index size) { m_diagonal.setOnes(size); }
 };
 
@@ -232,14 +228,15 @@ struct traits<DiagonalWrapper<_DiagonalVectorType> >
 {
   typedef _DiagonalVectorType DiagonalVectorType;
   typedef typename DiagonalVectorType::Scalar Scalar;
-  typedef typename DiagonalVectorType::Index Index;
-  typedef typename DiagonalVectorType::StorageKind StorageKind;
+  typedef typename DiagonalVectorType::StorageIndex StorageIndex;
+  typedef DiagonalShape StorageKind;
+  typedef typename traits<DiagonalVectorType>::XprKind XprKind;
   enum {
     RowsAtCompileTime = DiagonalVectorType::SizeAtCompileTime,
     ColsAtCompileTime = DiagonalVectorType::SizeAtCompileTime,
-    MaxRowsAtCompileTime = DiagonalVectorType::SizeAtCompileTime,
-    MaxColsAtCompileTime = DiagonalVectorType::SizeAtCompileTime,
-    Flags =  traits<DiagonalVectorType>::Flags & LvalueBit
+    MaxRowsAtCompileTime = DiagonalVectorType::MaxSizeAtCompileTime,
+    MaxColsAtCompileTime = DiagonalVectorType::MaxSizeAtCompileTime,
+    Flags =  (traits<DiagonalVectorType>::Flags & LvalueBit) | NoPreferredStorageOrderBit
   };
 };
 }
@@ -255,9 +252,11 @@ class DiagonalWrapper
     #endif
 
     /** Constructor from expression of diagonal coefficients to wrap. */
-    inline DiagonalWrapper(DiagonalVectorType& a_diagonal) : m_diagonal(a_diagonal) {}
+    EIGEN_DEVICE_FUNC
+    explicit inline DiagonalWrapper(DiagonalVectorType& a_diagonal) : m_diagonal(a_diagonal) {}
 
     /** \returns a const reference to the wrapped expression of diagonal coefficients. */
+    EIGEN_DEVICE_FUNC
     const DiagonalVectorType& diagonal() const { return m_diagonal; }
 
   protected:
@@ -277,7 +276,7 @@ template<typename Derived>
 inline const DiagonalWrapper<const Derived>
 MatrixBase<Derived>::asDiagonal() const
 {
-  return derived();
+  return DiagonalWrapper<const Derived>(derived());
 }
 
 /** \returns true if *this is approximately equal to a diagonal matrix,
@@ -291,12 +290,11 @@ MatrixBase<Derived>::asDiagonal() const
 template<typename Derived>
 bool MatrixBase<Derived>::isDiagonal(const RealScalar& prec) const
 {
-  using std::abs;
   if(cols() != rows()) return false;
   RealScalar maxAbsOnDiagonal = static_cast<RealScalar>(-1);
   for(Index j = 0; j < cols(); ++j)
   {
-    RealScalar absOnDiagonal = abs(coeff(j,j));
+    RealScalar absOnDiagonal = numext::abs(coeff(j,j));
     if(absOnDiagonal > maxAbsOnDiagonal) maxAbsOnDiagonal = absOnDiagonal;
   }
   for(Index j = 0; j < cols(); ++j)
@@ -308,6 +306,38 @@ bool MatrixBase<Derived>::isDiagonal(const RealScalar& prec) const
   return true;
 }
 
+namespace internal {
+
+template<> struct storage_kind_to_shape<DiagonalShape> { typedef DiagonalShape Shape; };
+
+struct Diagonal2Dense {};
+
+template<> struct AssignmentKind<DenseShape,DiagonalShape> { typedef Diagonal2Dense Kind; };
+
+// Diagonal matrix to Dense assignment
+template< typename DstXprType, typename SrcXprType, typename Functor>
+struct Assignment<DstXprType, SrcXprType, Functor, Diagonal2Dense>
+{
+  static void run(DstXprType &dst, const SrcXprType &src, const internal::assign_op<typename DstXprType::Scalar,typename SrcXprType::Scalar> &/*func*/)
+  {
+    Index dstRows = src.rows();
+    Index dstCols = src.cols();
+    if((dst.rows()!=dstRows) || (dst.cols()!=dstCols))
+      dst.resize(dstRows, dstCols);
+    
+    dst.setZero();
+    dst.diagonal() = src.diagonal();
+  }
+  
+  static void run(DstXprType &dst, const SrcXprType &src, const internal::add_assign_op<typename DstXprType::Scalar,typename SrcXprType::Scalar> &/*func*/)
+  { dst.diagonal() += src.diagonal(); }
+  
+  static void run(DstXprType &dst, const SrcXprType &src, const internal::sub_assign_op<typename DstXprType::Scalar,typename SrcXprType::Scalar> &/*func*/)
+  { dst.diagonal() -= src.diagonal(); }
+};
+
+} // namespace internal
+
 } // end namespace Eigen
 
 #endif // EIGEN_DIAGONALMATRIX_H

extern/Eigen3/Eigen/src/Core/DiagonalProduct.h

@@ -13,117 +13,14 @@
 
 namespace Eigen { 
 
-namespace internal {
-template<typename MatrixType, typename DiagonalType, int ProductOrder>
-struct traits<DiagonalProduct<MatrixType, DiagonalType, ProductOrder> >
- : traits<MatrixType>
-{
-  typedef typename scalar_product_traits<typename MatrixType::Scalar, typename DiagonalType::Scalar>::ReturnType Scalar;
-  enum {
-    RowsAtCompileTime = MatrixType::RowsAtCompileTime,
-    ColsAtCompileTime = MatrixType::ColsAtCompileTime,
-    MaxRowsAtCompileTime = MatrixType::MaxRowsAtCompileTime,
-    MaxColsAtCompileTime = MatrixType::MaxColsAtCompileTime,
-
-    _StorageOrder = MatrixType::Flags & RowMajorBit ? RowMajor : ColMajor,
-    _ScalarAccessOnDiag =  !((int(_StorageOrder) == ColMajor && int(ProductOrder) == OnTheLeft)
-                          ||(int(_StorageOrder) == RowMajor && int(ProductOrder) == OnTheRight)),
-    _SameTypes = is_same<typename MatrixType::Scalar, typename DiagonalType::Scalar>::value,
-    // FIXME currently we need same types, but in the future the next rule should be the one
-    //_Vectorizable = bool(int(MatrixType::Flags)&PacketAccessBit) && ((!_PacketOnDiag) || (_SameTypes && bool(int(DiagonalType::DiagonalVectorType::Flags)&PacketAccessBit))),
-    _Vectorizable = bool(int(MatrixType::Flags)&PacketAccessBit) && _SameTypes && (_ScalarAccessOnDiag || (bool(int(DiagonalType::DiagonalVectorType::Flags)&PacketAccessBit))),
-    _LinearAccessMask = (RowsAtCompileTime==1 || ColsAtCompileTime==1) ? LinearAccessBit : 0,
-
-    Flags = ((HereditaryBits|_LinearAccessMask|AlignedBit) & (unsigned int)(MatrixType::Flags)) | (_Vectorizable ? PacketAccessBit : 0),//(int(MatrixType::Flags)&int(DiagonalType::DiagonalVectorType::Flags)&AlignedBit),
-    Cost0 = EIGEN_ADD_COST(NumTraits<Scalar>::MulCost, MatrixType::CoeffReadCost),
-    CoeffReadCost = EIGEN_ADD_COST(Cost0,DiagonalType::DiagonalVectorType::CoeffReadCost)
-  };
-};
-}
-
-template<typename MatrixType, typename DiagonalType, int ProductOrder>
-class DiagonalProduct : internal::no_assignment_operator,
-                        public MatrixBase<DiagonalProduct<MatrixType, DiagonalType, ProductOrder> >
-{
-  public:
-
-    typedef MatrixBase<DiagonalProduct> Base;
-    EIGEN_DENSE_PUBLIC_INTERFACE(DiagonalProduct)
-
-    inline DiagonalProduct(const MatrixType& matrix, const DiagonalType& diagonal)
-      : m_matrix(matrix), m_diagonal(diagonal)
-    {
-      eigen_assert(diagonal.diagonal().size() == (ProductOrder == OnTheLeft ? matrix.rows() : matrix.cols()));
-    }
-
-    EIGEN_STRONG_INLINE Index rows() const { return m_matrix.rows(); }
-    EIGEN_STRONG_INLINE Index cols() const { return m_matrix.cols(); }
-
-    EIGEN_STRONG_INLINE const Scalar coeff(Index row, Index col) const
-    {
-      return m_diagonal.diagonal().coeff(ProductOrder == OnTheLeft ? row : col) * m_matrix.coeff(row, col);
-    }
-    
-    EIGEN_STRONG_INLINE const Scalar coeff(Index idx) const
-    {
-      enum {
-        StorageOrder = int(MatrixType::Flags) & RowMajorBit ? RowMajor : ColMajor
-      };
-      return coeff(int(StorageOrder)==ColMajor?idx:0,int(StorageOrder)==ColMajor?0:idx);
-    }
-
-    template<int LoadMode>
-    EIGEN_STRONG_INLINE PacketScalar packet(Index row, Index col) const
-    {
-      enum {
-        StorageOrder = Flags & RowMajorBit ? RowMajor : ColMajor
-      };
-      const Index indexInDiagonalVector = ProductOrder == OnTheLeft ? row : col;
-      return packet_impl<LoadMode>(row,col,indexInDiagonalVector,typename internal::conditional<
-        ((int(StorageOrder) == RowMajor && int(ProductOrder) == OnTheLeft)
-       ||(int(StorageOrder) == ColMajor && int(ProductOrder) == OnTheRight)), internal::true_type, internal::false_type>::type());
-    }
-    
-    template<int LoadMode>
-    EIGEN_STRONG_INLINE PacketScalar packet(Index idx) const
-    {
-      enum {
-        StorageOrder = int(MatrixType::Flags) & RowMajorBit ? RowMajor : ColMajor
-      };
-      return packet<LoadMode>(int(StorageOrder)==ColMajor?idx:0,int(StorageOrder)==ColMajor?0:idx);
-    }
-
-  protected:
-    template<int LoadMode>
-    EIGEN_STRONG_INLINE PacketScalar packet_impl(Index row, Index col, Index id, internal::true_type) const
-    {
-      return internal::pmul(m_matrix.template packet<LoadMode>(row, col),
-                     internal::pset1<PacketScalar>(m_diagonal.diagonal().coeff(id)));
-    }
-
-    template<int LoadMode>
-    EIGEN_STRONG_INLINE PacketScalar packet_impl(Index row, Index col, Index id, internal::false_type) const
-    {
-      enum {
-        InnerSize = (MatrixType::Flags & RowMajorBit) ? MatrixType::ColsAtCompileTime : MatrixType::RowsAtCompileTime,
-        DiagonalVectorPacketLoadMode = (LoadMode == Aligned && (((InnerSize%16) == 0) || (int(DiagonalType::DiagonalVectorType::Flags)&AlignedBit)==AlignedBit) ? Aligned : Unaligned)
-      };
-      return internal::pmul(m_matrix.template packet<LoadMode>(row, col),
-                     m_diagonal.diagonal().template packet<DiagonalVectorPacketLoadMode>(id));
-    }
-
-    typename MatrixType::Nested m_matrix;
-    typename DiagonalType::Nested m_diagonal;
-};
-
 /** \returns the diagonal matrix product of \c *this by the diagonal matrix \a diagonal.
   */
 template<typename Derived>
 template<typename DiagonalDerived>
-inline const DiagonalProduct<Derived, DiagonalDerived, OnTheRight>
+inline const Product<Derived, DiagonalDerived, LazyProduct>
 MatrixBase<Derived>::operator*(const DiagonalBase<DiagonalDerived> &a_diagonal) const
 {
-  return DiagonalProduct<Derived, DiagonalDerived, OnTheRight>(derived(), a_diagonal.derived());
+  return Product<Derived, DiagonalDerived, LazyProduct>(derived(),a_diagonal.derived());
 }
 
 } // end namespace Eigen

extern/Eigen3/Eigen/src/Core/Dot.h

@@ -28,26 +28,33 @@ template<typename T, typename U,
 >
 struct dot_nocheck
 {
-  typedef typename scalar_product_traits<typename traits<T>::Scalar,typename traits<U>::Scalar>::ReturnType ResScalar;
-  static inline ResScalar run(const MatrixBase<T>& a, const MatrixBase<U>& b)
+  typedef scalar_conj_product_op<typename traits<T>::Scalar,typename traits<U>::Scalar> conj_prod;
+  typedef typename conj_prod::result_type ResScalar;
+  EIGEN_DEVICE_FUNC
+  EIGEN_STRONG_INLINE
+  static ResScalar run(const MatrixBase<T>& a, const MatrixBase<U>& b)
   {
-    return a.template binaryExpr<scalar_conj_product_op<typename traits<T>::Scalar,typename traits<U>::Scalar> >(b).sum();
+    return a.template binaryExpr<conj_prod>(b).sum();
   }
 };
 
 template<typename T, typename U>
 struct dot_nocheck<T, U, true>
 {
-  typedef typename scalar_product_traits<typename traits<T>::Scalar,typename traits<U>::Scalar>::ReturnType ResScalar;
-  static inline ResScalar run(const MatrixBase<T>& a, const MatrixBase<U>& b)
+  typedef scalar_conj_product_op<typename traits<T>::Scalar,typename traits<U>::Scalar> conj_prod;
+  typedef typename conj_prod::result_type ResScalar;
+  EIGEN_DEVICE_FUNC
+  EIGEN_STRONG_INLINE
+  static ResScalar run(const MatrixBase<T>& a, const MatrixBase<U>& b)
   {
-    return a.transpose().template binaryExpr<scalar_conj_product_op<typename traits<T>::Scalar,typename traits<U>::Scalar> >(b).sum();
+    return a.transpose().template binaryExpr<conj_prod>(b).sum();
   }
 };
 
 } // end namespace internal
 
-/** \returns the dot product of *this with other.
+/** \fn MatrixBase::dot
+  * \returns the dot product of *this with other.
   *
   * \only_for_vectors
   *
@@ -59,55 +66,31 @@ struct dot_nocheck<T, U, true>
   */
 template<typename Derived>
 template<typename OtherDerived>
-typename internal::scalar_product_traits<typename internal::traits<Derived>::Scalar,typename internal::traits<OtherDerived>::Scalar>::ReturnType
+EIGEN_DEVICE_FUNC
+EIGEN_STRONG_INLINE
+typename ScalarBinaryOpTraits<typename internal::traits<Derived>::Scalar,typename internal::traits<OtherDerived>::Scalar>::ReturnType
 MatrixBase<Derived>::dot(const MatrixBase<OtherDerived>& other) const
 {
   EIGEN_STATIC_ASSERT_VECTOR_ONLY(Derived)
   EIGEN_STATIC_ASSERT_VECTOR_ONLY(OtherDerived)
   EIGEN_STATIC_ASSERT_SAME_VECTOR_SIZE(Derived,OtherDerived)
+#if !(defined(EIGEN_NO_STATIC_ASSERT) && defined(EIGEN_NO_DEBUG))
   typedef internal::scalar_conj_product_op<Scalar,typename OtherDerived::Scalar> func;
   EIGEN_CHECK_BINARY_COMPATIBILIY(func,Scalar,typename OtherDerived::Scalar);
-
+#endif
+  
   eigen_assert(size() == other.size());
 
   return internal::dot_nocheck<Derived,OtherDerived>::run(*this, other);
 }
 
-#ifdef EIGEN2_SUPPORT
-/** \returns the dot product of *this with other, with the Eigen2 convention that the dot product is linear in the first variable
-  * (conjugating the second variable). Of course this only makes a difference in the complex case.
-  *
-  * This method is only available in EIGEN2_SUPPORT mode.
-  *
-  * \only_for_vectors
-  *
-  * \sa dot()
-  */
-template<typename Derived>
-template<typename OtherDerived>
-typename internal::traits<Derived>::Scalar
-MatrixBase<Derived>::eigen2_dot(const MatrixBase<OtherDerived>& other) const
-{
-  EIGEN_STATIC_ASSERT_VECTOR_ONLY(Derived)
-  EIGEN_STATIC_ASSERT_VECTOR_ONLY(OtherDerived)
-  EIGEN_STATIC_ASSERT_SAME_VECTOR_SIZE(Derived,OtherDerived)
-  EIGEN_STATIC_ASSERT((internal::is_same<Scalar, typename OtherDerived::Scalar>::value),
-    YOU_MIXED_DIFFERENT_NUMERIC_TYPES__YOU_NEED_TO_USE_THE_CAST_METHOD_OF_MATRIXBASE_TO_CAST_NUMERIC_TYPES_EXPLICITLY)
-
-  eigen_assert(size() == other.size());
-
-  return internal::dot_nocheck<OtherDerived,Derived>::run(other,*this);
-}
-#endif
-
-
 //---------- implementation of L2 norm and related functions ----------
 
 /** \returns, for vectors, the squared \em l2 norm of \c *this, and for matrices the Frobenius norm.
   * In both cases, it consists in the sum of the square of all the matrix entries.
   * For vectors, this is also equals to the dot product of \c *this with itself.
   *
-  * \sa dot(), norm()
+  * \sa dot(), norm(), lpNorm()
   */
 template<typename Derived>
 EIGEN_STRONG_INLINE typename NumTraits<typename internal::traits<Derived>::Scalar>::Real MatrixBase<Derived>::squaredNorm() const
@@ -119,41 +102,98 @@ EIGEN_STRONG_INLINE typename NumTraits<typename internal::traits<Derived>::Scala
   * In both cases, it consists in the square root of the sum of the square of all the matrix entries.
   * For vectors, this is also equals to the square root of the dot product of \c *this with itself.
   *
-  * \sa dot(), squaredNorm()
+  * \sa lpNorm(), dot(), squaredNorm()
   */
 template<typename Derived>
-inline typename NumTraits<typename internal::traits<Derived>::Scalar>::Real MatrixBase<Derived>::norm() const
+EIGEN_STRONG_INLINE typename NumTraits<typename internal::traits<Derived>::Scalar>::Real MatrixBase<Derived>::norm() const
 {
-  using std::sqrt;
-  return sqrt(squaredNorm());
+  return numext::sqrt(squaredNorm());
 }
 
-/** \returns an expression of the quotient of *this by its own norm.
+/** \returns an expression of the quotient of \c *this by its own norm.
+  *
+  * \warning If the input vector is too small (i.e., this->norm()==0),
+  *          then this function returns a copy of the input.
   *
   * \only_for_vectors
   *
   * \sa norm(), normalize()
   */
 template<typename Derived>
-inline const typename MatrixBase<Derived>::PlainObject
+EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::PlainObject
 MatrixBase<Derived>::normalized() const
 {
-  typedef typename internal::nested<Derived>::type Nested;
-  typedef typename internal::remove_reference<Nested>::type _Nested;
+  typedef typename internal::nested_eval<Derived,2>::type _Nested;
   _Nested n(derived());
-  return n / n.norm();
+  RealScalar z = n.squaredNorm();
+  // NOTE: after extensive benchmarking, this conditional does not impact performance, at least on recent x86 CPU
+  if(z>RealScalar(0))
+    return n / numext::sqrt(z);
+  else
+    return n;
 }
 
 /** Normalizes the vector, i.e. divides it by its own norm.
   *
   * \only_for_vectors
   *
+  * \warning If the input vector is too small (i.e., this->norm()==0), then \c *this is left unchanged.
+  *
   * \sa norm(), normalized()
   */
 template<typename Derived>
-inline void MatrixBase<Derived>::normalize()
+EIGEN_STRONG_INLINE void MatrixBase<Derived>::normalize()
 {
-  *this /= norm();
+  RealScalar z = squaredNorm();
+  // NOTE: after extensive benchmarking, this conditional does not impact performance, at least on recent x86 CPU
+  if(z>RealScalar(0))
+    derived() /= numext::sqrt(z);
+}
+
+/** \returns an expression of the quotient of \c *this by its own norm while avoiding underflow and overflow.
+  *
+  * \only_for_vectors
+  *
+  * This method is analogue to the normalized() method, but it reduces the risk of
+  * underflow and overflow when computing the norm.
+  *
+  * \warning If the input vector is too small (i.e., this->norm()==0),
+  *          then this function returns a copy of the input.
+  *
+  * \sa stableNorm(), stableNormalize(), normalized()
+  */
+template<typename Derived>
+EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::PlainObject
+MatrixBase<Derived>::stableNormalized() const
+{
+  typedef typename internal::nested_eval<Derived,3>::type _Nested;
+  _Nested n(derived());
+  RealScalar w = n.cwiseAbs().maxCoeff();
+  RealScalar z = (n/w).squaredNorm();
+  if(z>RealScalar(0))
+    return n / (numext::sqrt(z)*w);
+  else
+    return n;
+}
+
+/** Normalizes the vector while avoid underflow and overflow
+  *
+  * \only_for_vectors
+  *
+  * This method is analogue to the normalize() method, but it reduces the risk of
+  * underflow and overflow when computing the norm.
+  *
+  * \warning If the input vector is too small (i.e., this->norm()==0), then \c *this is left unchanged.
+  *
+  * \sa stableNorm(), stableNormalized(), normalize()
+  */
+template<typename Derived>
+EIGEN_STRONG_INLINE void MatrixBase<Derived>::stableNormalize()
+{
+  RealScalar w = cwiseAbs().maxCoeff();
+  RealScalar z = (derived()/w).squaredNorm();
+  if(z>RealScalar(0))
+    derived() /= numext::sqrt(z)*w;
 }
 
 //---------- implementation of other norms ----------
@@ -164,9 +204,10 @@ template<typename Derived, int p>
 struct lpNorm_selector
 {
   typedef typename NumTraits<typename traits<Derived>::Scalar>::Real RealScalar;
+  EIGEN_DEVICE_FUNC
   static inline RealScalar run(const MatrixBase<Derived>& m)
   {
-    using std::pow;
+    EIGEN_USING_STD_MATH(pow)
     return pow(m.cwiseAbs().array().pow(p).sum(), RealScalar(1)/p);
   }
 };
@@ -174,6 +215,7 @@ struct lpNorm_selector
 template<typename Derived>
 struct lpNorm_selector<Derived, 1>
 {
+  EIGEN_DEVICE_FUNC
   static inline typename NumTraits<typename traits<Derived>::Scalar>::Real run(const MatrixBase<Derived>& m)
   {
     return m.cwiseAbs().sum();
@@ -183,6 +225,7 @@ struct lpNorm_selector<Derived, 1>
 template<typename Derived>
 struct lpNorm_selector<Derived, 2>
 {
+  EIGEN_DEVICE_FUNC
   static inline typename NumTraits<typename traits<Derived>::Scalar>::Real run(const MatrixBase<Derived>& m)
   {
     return m.norm();
@@ -192,23 +235,35 @@ struct lpNorm_selector<Derived, 2>
 template<typename Derived>
 struct lpNorm_selector<Derived, Infinity>
 {
-  static inline typename NumTraits<typename traits<Derived>::Scalar>::Real run(const MatrixBase<Derived>& m)
+  typedef typename NumTraits<typename traits<Derived>::Scalar>::Real RealScalar;
+  EIGEN_DEVICE_FUNC
+  static inline RealScalar run(const MatrixBase<Derived>& m)
   {
+    if(Derived::SizeAtCompileTime==0 || (Derived::SizeAtCompileTime==Dynamic && m.size()==0))
+      return RealScalar(0);
     return m.cwiseAbs().maxCoeff();
   }
 };
 
 } // end namespace internal
 
-/** \returns the \f$ \ell^p \f$ norm of *this, that is, returns the p-th root of the sum of the p-th powers of the absolute values
-  *          of the coefficients of *this. If \a p is the special value \a Eigen::Infinity, this function returns the \f$ \ell^\infty \f$
-  *          norm, that is the maximum of the absolute values of the coefficients of *this.
+/** \returns the \b coefficient-wise \f$ \ell^p \f$ norm of \c *this, that is, returns the p-th root of the sum of the p-th powers of the absolute values
+  *          of the coefficients of \c *this. If \a p is the special value \a Eigen::Infinity, this function returns the \f$ \ell^\infty \f$
+  *          norm, that is the maximum of the absolute values of the coefficients of \c *this.
+  *
+  * In all cases, if \c *this is empty, then the value 0 is returned.
+  *
+  * \note For matrices, this function does not compute the <a href="https://en.wikipedia.org/wiki/Operator_norm">operator-norm</a>. That is, if \c *this is a matrix, then its coefficients are interpreted as a 1D vector. Nonetheless, you can easily compute the 1-norm and \f$\infty\f$-norm matrix operator norms using \link TutorialReductionsVisitorsBroadcastingReductionsNorm partial reductions \endlink.
   *
   * \sa norm()
   */
 template<typename Derived>
 template<int p>
+#ifndef EIGEN_PARSED_BY_DOXYGEN
 inline typename NumTraits<typename internal::traits<Derived>::Scalar>::Real
+#else
+MatrixBase<Derived>::RealScalar
+#endif
 MatrixBase<Derived>::lpNorm() const
 {
   return internal::lpNorm_selector<Derived, p>::run(*this);
@@ -227,8 +282,8 @@ template<typename OtherDerived>
 bool MatrixBase<Derived>::isOrthogonal
 (const MatrixBase<OtherDerived>& other, const RealScalar& prec) const
 {
-  typename internal::nested<Derived,2>::type nested(derived());
-  typename internal::nested<OtherDerived,2>::type otherNested(other.derived());
+  typename internal::nested_eval<Derived,2>::type nested(derived());
+  typename internal::nested_eval<OtherDerived,2>::type otherNested(other.derived());
   return numext::abs2(nested.dot(otherNested)) <= prec * prec * nested.squaredNorm() * otherNested.squaredNorm();
 }
 
@@ -246,13 +301,13 @@ bool MatrixBase<Derived>::isOrthogonal
 template<typename Derived>
 bool MatrixBase<Derived>::isUnitary(const RealScalar& prec) const
 {
-  typename Derived::Nested nested(derived());
+  typename internal::nested_eval<Derived,1>::type self(derived());
   for(Index i = 0; i < cols(); ++i)
   {
-    if(!internal::isApprox(nested.col(i).squaredNorm(), static_cast<RealScalar>(1), prec))
+    if(!internal::isApprox(self.col(i).squaredNorm(), static_cast<RealScalar>(1), prec))
       return false;
     for(Index j = 0; j < i; ++j)
-      if(!internal::isMuchSmallerThan(nested.col(i).dot(nested.col(j)), static_cast<Scalar>(1), prec))
+      if(!internal::isMuchSmallerThan(self.col(i).dot(self.col(j)), static_cast<Scalar>(1), prec))
         return false;
   }
   return true;

extern/Eigen3/Eigen/src/Core/EigenBase.h

@@ -13,7 +13,10 @@
 
 namespace Eigen {
 
-/** Common base class for all classes T such that MatrixBase has an operator=(T) and a constructor MatrixBase(T).
+/** \class EigenBase
+  * \ingroup Core_Module
+  * 
+  * Common base class for all classes T such that MatrixBase has an operator=(T) and a constructor MatrixBase(T).
   *
   * In other words, an EigenBase object is an object that can be copied into a MatrixBase.
   *
@@ -21,39 +24,57 @@ namespace Eigen {
   *
   * Notice that this class is trivial, it is only used to disambiguate overloaded functions.
   *
-  * \sa \ref TopicClassHierarchy
+  * \sa \blank \ref TopicClassHierarchy
   */
 template<typename Derived> struct EigenBase
 {
 //   typedef typename internal::plain_matrix_type<Derived>::type PlainObject;
+  
+  /** \brief The interface type of indices
+    * \details To change this, \c \#define the preprocessor symbol \c EIGEN_DEFAULT_DENSE_INDEX_TYPE.
+    * \deprecated Since Eigen 3.3, its usage is deprecated. Use Eigen::Index instead.
+    * \sa StorageIndex, \ref TopicPreprocessorDirectives.
+    */
+  typedef Eigen::Index Index;
 
+  // FIXME is it needed?
   typedef typename internal::traits<Derived>::StorageKind StorageKind;
-  typedef typename internal::traits<Derived>::Index Index;
 
   /** \returns a reference to the derived object */
+  EIGEN_DEVICE_FUNC
   Derived& derived() { return *static_cast<Derived*>(this); }
   /** \returns a const reference to the derived object */
+  EIGEN_DEVICE_FUNC
   const Derived& derived() const { return *static_cast<const Derived*>(this); }
 
+  EIGEN_DEVICE_FUNC
   inline Derived& const_cast_derived() const
   { return *static_cast<Derived*>(const_cast<EigenBase*>(this)); }
+  EIGEN_DEVICE_FUNC
   inline const Derived& const_derived() const
   { return *static_cast<const Derived*>(this); }
 
   /** \returns the number of rows. \sa cols(), RowsAtCompileTime */
+  EIGEN_DEVICE_FUNC
   inline Index rows() const { return derived().rows(); }
   /** \returns the number of columns. \sa rows(), ColsAtCompileTime*/
+  EIGEN_DEVICE_FUNC
   inline Index cols() const { return derived().cols(); }
   /** \returns the number of coefficients, which is rows()*cols().
     * \sa rows(), cols(), SizeAtCompileTime. */
+  EIGEN_DEVICE_FUNC
   inline Index size() const { return rows() * cols(); }
 
   /** \internal Don't use it, but do the equivalent: \code dst = *this; \endcode */
-  template<typename Dest> inline void evalTo(Dest& dst) const
+  template<typename Dest>
+  EIGEN_DEVICE_FUNC
+  inline void evalTo(Dest& dst) const
   { derived().evalTo(dst); }
 
   /** \internal Don't use it, but do the equivalent: \code dst += *this; \endcode */
-  template<typename Dest> inline void addTo(Dest& dst) const
+  template<typename Dest>
+  EIGEN_DEVICE_FUNC
+  inline void addTo(Dest& dst) const
   {
     // This is the default implementation,
     // derived class can reimplement it in a more optimized way.
@@ -63,7 +84,9 @@ template<typename Derived> struct EigenBase
   }
 
   /** \internal Don't use it, but do the equivalent: \code dst -= *this; \endcode */
-  template<typename Dest> inline void subTo(Dest& dst) const
+  template<typename Dest>
+  EIGEN_DEVICE_FUNC
+  inline void subTo(Dest& dst) const
   {
     // This is the default implementation,
     // derived class can reimplement it in a more optimized way.
@@ -73,7 +96,8 @@ template<typename Derived> struct EigenBase
   }
 
   /** \internal Don't use it, but do the equivalent: \code dst.applyOnTheRight(*this); \endcode */
-  template<typename Dest> inline void applyThisOnTheRight(Dest& dst) const
+  template<typename Dest>
+  EIGEN_DEVICE_FUNC inline void applyThisOnTheRight(Dest& dst) const
   {
     // This is the default implementation,
     // derived class can reimplement it in a more optimized way.
@@ -81,7 +105,8 @@ template<typename Derived> struct EigenBase
   }
 
   /** \internal Don't use it, but do the equivalent: \code dst.applyOnTheLeft(*this); \endcode */
-  template<typename Dest> inline void applyThisOnTheLeft(Dest& dst) const
+  template<typename Dest>
+  EIGEN_DEVICE_FUNC inline void applyThisOnTheLeft(Dest& dst) const
   {
     // This is the default implementation,
     // derived class can reimplement it in a more optimized way.
@@ -104,25 +129,28 @@ template<typename Derived> struct EigenBase
   */
 template<typename Derived>
 template<typename OtherDerived>
+EIGEN_DEVICE_FUNC
 Derived& DenseBase<Derived>::operator=(const EigenBase<OtherDerived> &other)
 {
-  other.derived().evalTo(derived());
+  call_assignment(derived(), other.derived());
   return derived();
 }
 
 template<typename Derived>
 template<typename OtherDerived>
+EIGEN_DEVICE_FUNC
 Derived& DenseBase<Derived>::operator+=(const EigenBase<OtherDerived> &other)
 {
-  other.derived().addTo(derived());
+  call_assignment(derived(), other.derived(), internal::add_assign_op<Scalar,typename OtherDerived::Scalar>());
   return derived();
 }
 
 template<typename Derived>
 template<typename OtherDerived>
+EIGEN_DEVICE_FUNC
 Derived& DenseBase<Derived>::operator-=(const EigenBase<OtherDerived> &other)
 {
-  other.derived().subTo(derived());
+  call_assignment(derived(), other.derived(), internal::sub_assign_op<Scalar,typename OtherDerived::Scalar>());
   return derived();
 }
 

extern/Eigen3/Eigen/src/Core/ForceAlignedAccess.h

@@ -39,29 +39,29 @@ template<typename ExpressionType> class ForceAlignedAccess
     typedef typename internal::dense_xpr_base<ForceAlignedAccess>::type Base;
     EIGEN_DENSE_PUBLIC_INTERFACE(ForceAlignedAccess)
 
-    inline ForceAlignedAccess(const ExpressionType& matrix) : m_expression(matrix) {}
+    EIGEN_DEVICE_FUNC explicit inline ForceAlignedAccess(const ExpressionType& matrix) : m_expression(matrix) {}
 
-    inline Index rows() const { return m_expression.rows(); }
-    inline Index cols() const { return m_expression.cols(); }
-    inline Index outerStride() const { return m_expression.outerStride(); }
-    inline Index innerStride() const { return m_expression.innerStride(); }
+    EIGEN_DEVICE_FUNC inline Index rows() const { return m_expression.rows(); }
+    EIGEN_DEVICE_FUNC inline Index cols() const { return m_expression.cols(); }
+    EIGEN_DEVICE_FUNC inline Index outerStride() const { return m_expression.outerStride(); }
+    EIGEN_DEVICE_FUNC inline Index innerStride() const { return m_expression.innerStride(); }
 
-    inline const CoeffReturnType coeff(Index row, Index col) const
+    EIGEN_DEVICE_FUNC inline const CoeffReturnType coeff(Index row, Index col) const
     {
       return m_expression.coeff(row, col);
     }
 
-    inline Scalar& coeffRef(Index row, Index col)
+    EIGEN_DEVICE_FUNC inline Scalar& coeffRef(Index row, Index col)
     {
       return m_expression.const_cast_derived().coeffRef(row, col);
     }
 
-    inline const CoeffReturnType coeff(Index index) const
+    EIGEN_DEVICE_FUNC inline const CoeffReturnType coeff(Index index) const
     {
       return m_expression.coeff(index);
     }
 
-    inline Scalar& coeffRef(Index index)
+    EIGEN_DEVICE_FUNC inline Scalar& coeffRef(Index index)
     {
       return m_expression.const_cast_derived().coeffRef(index);
     }
@@ -90,7 +90,7 @@ template<typename ExpressionType> class ForceAlignedAccess
       m_expression.const_cast_derived().template writePacket<Aligned>(index, x);
     }
 
-    operator const ExpressionType&() const { return m_expression; }
+    EIGEN_DEVICE_FUNC operator const ExpressionType&() const { return m_expression; }
 
   protected:
     const ExpressionType& m_expression;
@@ -127,7 +127,7 @@ template<bool Enable>
 inline typename internal::add_const_on_value_type<typename internal::conditional<Enable,ForceAlignedAccess<Derived>,Derived&>::type>::type
 MatrixBase<Derived>::forceAlignedAccessIf() const
 {
-  return derived();
+  return derived();  // FIXME This should not work but apparently is never used
 }
 
 /** \returns an expression of *this with forced aligned access if \a Enable is true.
@@ -138,7 +138,7 @@ template<bool Enable>
 inline typename internal::conditional<Enable,ForceAlignedAccess<Derived>,Derived&>::type
 MatrixBase<Derived>::forceAlignedAccessIf()
 {
-  return derived();
+  return derived();  // FIXME This should not work but apparently is never used
 }
 
 } // end namespace Eigen

extern/Eigen3/Eigen/src/Core/Fuzzy.h

@@ -19,18 +19,19 @@ namespace internal
 template<typename Derived, typename OtherDerived, bool is_integer = NumTraits<typename Derived::Scalar>::IsInteger>
 struct isApprox_selector
 {
+  EIGEN_DEVICE_FUNC
   static bool run(const Derived& x, const OtherDerived& y, const typename Derived::RealScalar& prec)
   {
-    using std::min;
-    typename internal::nested<Derived,2>::type nested(x);
-    typename internal::nested<OtherDerived,2>::type otherNested(y);
-    return (nested - otherNested).cwiseAbs2().sum() <= prec * prec * (min)(nested.cwiseAbs2().sum(), otherNested.cwiseAbs2().sum());
+    typename internal::nested_eval<Derived,2>::type nested(x);
+    typename internal::nested_eval<OtherDerived,2>::type otherNested(y);
+    return (nested - otherNested).cwiseAbs2().sum() <= prec * prec * numext::mini(nested.cwiseAbs2().sum(), otherNested.cwiseAbs2().sum());
   }
 };
 
 template<typename Derived, typename OtherDerived>
 struct isApprox_selector<Derived, OtherDerived, true>
 {
+  EIGEN_DEVICE_FUNC
   static bool run(const Derived& x, const OtherDerived& y, const typename Derived::RealScalar&)
   {
     return x.matrix() == y.matrix();
@@ -40,6 +41,7 @@ struct isApprox_selector<Derived, OtherDerived, true>
 template<typename Derived, typename OtherDerived, bool is_integer = NumTraits<typename Derived::Scalar>::IsInteger>
 struct isMuchSmallerThan_object_selector
 {
+  EIGEN_DEVICE_FUNC
   static bool run(const Derived& x, const OtherDerived& y, const typename Derived::RealScalar& prec)
   {
     return x.cwiseAbs2().sum() <= numext::abs2(prec) * y.cwiseAbs2().sum();
@@ -49,6 +51,7 @@ struct isMuchSmallerThan_object_selector
 template<typename Derived, typename OtherDerived>
 struct isMuchSmallerThan_object_selector<Derived, OtherDerived, true>
 {
+  EIGEN_DEVICE_FUNC
   static bool run(const Derived& x, const OtherDerived&, const typename Derived::RealScalar&)
   {
     return x.matrix() == Derived::Zero(x.rows(), x.cols()).matrix();
@@ -58,6 +61,7 @@ struct isMuchSmallerThan_object_selector<Derived, OtherDerived, true>
 template<typename Derived, bool is_integer = NumTraits<typename Derived::Scalar>::IsInteger>
 struct isMuchSmallerThan_scalar_selector
 {
+  EIGEN_DEVICE_FUNC
   static bool run(const Derived& x, const typename Derived::RealScalar& y, const typename Derived::RealScalar& prec)
   {
     return x.cwiseAbs2().sum() <= numext::abs2(prec * y);
@@ -67,6 +71,7 @@ struct isMuchSmallerThan_scalar_selector
 template<typename Derived>
 struct isMuchSmallerThan_scalar_selector<Derived, true>
 {
+  EIGEN_DEVICE_FUNC
   static bool run(const Derived& x, const typename Derived::RealScalar&, const typename Derived::RealScalar&)
   {
     return x.matrix() == Derived::Zero(x.rows(), x.cols()).matrix();

extern/Eigen3/Eigen/src/Core/GeneralProduct.h

@@ -11,29 +11,7 @@
 #ifndef EIGEN_GENERAL_PRODUCT_H
 #define EIGEN_GENERAL_PRODUCT_H
 
-namespace Eigen { 
-
-/** \class GeneralProduct
-  * \ingroup Core_Module
-  *
-  * \brief Expression of the product of two general matrices or vectors
-  *
-  * \param LhsNested the type used to store the left-hand side
-  * \param RhsNested the type used to store the right-hand side
-  * \param ProductMode the type of the product
-  *
-  * This class represents an expression of the product of two general matrices.
-  * We call a general matrix, a dense matrix with full storage. For instance,
-  * This excludes triangular, selfadjoint, and sparse matrices.
-  * It is the return type of the operator* between general matrices. Its template
-  * arguments are determined automatically by ProductReturnType. Therefore,
-  * GeneralProduct should never be used direclty. To determine the result type of a
-  * function which involves a matrix product, use ProductReturnType::Type.
-  *
-  * \sa ProductReturnType, MatrixBase::operator*(const MatrixBase<OtherDerived>&)
-  */
-template<typename Lhs, typename Rhs, int ProductType = internal::product_type<Lhs,Rhs>::value>
-class GeneralProduct;
+namespace Eigen {
 
 enum {
   Large = 2,
@@ -46,11 +24,17 @@ template<int Rows, int Cols, int Depth> struct product_type_selector;
 
 template<int Size, int MaxSize> struct product_size_category
 {
-  enum { is_large = MaxSize == Dynamic ||
-                    Size >= EIGEN_CACHEFRIENDLY_PRODUCT_THRESHOLD,
-         value = is_large  ? Large
-               : Size == 1 ? 1
-                           : Small
+  enum {
+    #ifndef EIGEN_CUDA_ARCH
+    is_large = MaxSize == Dynamic ||
+               Size >= EIGEN_CACHEFRIENDLY_PRODUCT_THRESHOLD ||
+               (Size==Dynamic && MaxSize>=EIGEN_CACHEFRIENDLY_PRODUCT_THRESHOLD),
+    #else
+    is_large = 0,
+    #endif
+    value = is_large  ? Large
+          : Size == 1 ? 1
+                      : Small
   };
 };
 
@@ -59,15 +43,14 @@ template<typename Lhs, typename Rhs> struct product_type
   typedef typename remove_all<Lhs>::type _Lhs;
   typedef typename remove_all<Rhs>::type _Rhs;
   enum {
-    MaxRows  = _Lhs::MaxRowsAtCompileTime,
-    Rows  = _Lhs::RowsAtCompileTime,
-    MaxCols  = _Rhs::MaxColsAtCompileTime,
-    Cols  = _Rhs::ColsAtCompileTime,
-    MaxDepth = EIGEN_SIZE_MIN_PREFER_FIXED(_Lhs::MaxColsAtCompileTime,
-                                           _Rhs::MaxRowsAtCompileTime),
-    Depth = EIGEN_SIZE_MIN_PREFER_FIXED(_Lhs::ColsAtCompileTime,
-                                        _Rhs::RowsAtCompileTime),
-    LargeThreshold = EIGEN_CACHEFRIENDLY_PRODUCT_THRESHOLD
+    MaxRows = traits<_Lhs>::MaxRowsAtCompileTime,
+    Rows    = traits<_Lhs>::RowsAtCompileTime,
+    MaxCols = traits<_Rhs>::MaxColsAtCompileTime,
+    Cols    = traits<_Rhs>::ColsAtCompileTime,
+    MaxDepth = EIGEN_SIZE_MIN_PREFER_FIXED(traits<_Lhs>::MaxColsAtCompileTime,
+                                           traits<_Rhs>::MaxRowsAtCompileTime),
+    Depth = EIGEN_SIZE_MIN_PREFER_FIXED(traits<_Lhs>::ColsAtCompileTime,
+                                        traits<_Rhs>::RowsAtCompileTime)
   };
 
   // the splitting into different lines of code here, introducing the _select enums and the typedef below,
@@ -82,7 +65,8 @@ private:
 
 public:
   enum {
-    value = selector::ret
+    value = selector::ret,
+    ret = selector::ret
   };
 #ifdef EIGEN_DEBUG_PRODUCT
   static void debug()
@@ -98,12 +82,13 @@ public:
 #endif
 };
 
-
 /* The following allows to select the kind of product at compile time
  * based on the three dimensions of the product.
  * This is a compile time mapping from {1,Small,Large}^3 -> {product types} */
 // FIXME I'm not sure the current mapping is the ideal one.
 template<int M, int N>  struct product_type_selector<M,N,1>              { enum { ret = OuterProduct }; };
+template<int M>         struct product_type_selector<M, 1, 1>            { enum { ret = LazyCoeffBasedProductMode }; };
+template<int N>         struct product_type_selector<1, N, 1>            { enum { ret = LazyCoeffBasedProductMode }; };
 template<int Depth>     struct product_type_selector<1,    1,    Depth>  { enum { ret = InnerProduct }; };
 template<>              struct product_type_selector<1,    1,    1>      { enum { ret = InnerProduct }; };
 template<>              struct product_type_selector<Small,1,    Small>  { enum { ret = CoeffBasedProductMode }; };
@@ -122,60 +107,12 @@ template<>              struct product_type_selector<Small,Small,Large>  { enum
 template<>              struct product_type_selector<Large,Small,Large>  { enum { ret = GemmProduct }; };
 template<>              struct product_type_selector<Small,Large,Large>  { enum { ret = GemmProduct }; };
 template<>              struct product_type_selector<Large,Large,Large>  { enum { ret = GemmProduct }; };
-template<>              struct product_type_selector<Large,Small,Small>  { enum { ret = GemmProduct }; };
-template<>              struct product_type_selector<Small,Large,Small>  { enum { ret = GemmProduct }; };
+template<>              struct product_type_selector<Large,Small,Small>  { enum { ret = CoeffBasedProductMode }; };
+template<>              struct product_type_selector<Small,Large,Small>  { enum { ret = CoeffBasedProductMode }; };
 template<>              struct product_type_selector<Large,Large,Small>  { enum { ret = GemmProduct }; };
 
 } // end namespace internal
 
-/** \class ProductReturnType
-  * \ingroup Core_Module
-  *
-  * \brief Helper class to get the correct and optimized returned type of operator*
-  *
-  * \param Lhs the type of the left-hand side
-  * \param Rhs the type of the right-hand side
-  * \param ProductMode the type of the product (determined automatically by internal::product_mode)
-  *
-  * This class defines the typename Type representing the optimized product expression
-  * between two matrix expressions. In practice, using ProductReturnType<Lhs,Rhs>::Type
-  * is the recommended way to define the result type of a function returning an expression
-  * which involve a matrix product. The class Product should never be
-  * used directly.
-  *
-  * \sa class Product, MatrixBase::operator*(const MatrixBase<OtherDerived>&)
-  */
-template<typename Lhs, typename Rhs, int ProductType>
-struct ProductReturnType
-{
-  // TODO use the nested type to reduce instanciations ????
-//   typedef typename internal::nested<Lhs,Rhs::ColsAtCompileTime>::type LhsNested;
-//   typedef typename internal::nested<Rhs,Lhs::RowsAtCompileTime>::type RhsNested;
-
-  typedef GeneralProduct<Lhs/*Nested*/, Rhs/*Nested*/, ProductType> Type;
-};
-
-template<typename Lhs, typename Rhs>
-struct ProductReturnType<Lhs,Rhs,CoeffBasedProductMode>
-{
-  typedef typename internal::nested<Lhs, Rhs::ColsAtCompileTime, typename internal::plain_matrix_type<Lhs>::type >::type LhsNested;
-  typedef typename internal::nested<Rhs, Lhs::RowsAtCompileTime, typename internal::plain_matrix_type<Rhs>::type >::type RhsNested;
-  typedef CoeffBasedProduct<LhsNested, RhsNested, EvalBeforeAssigningBit | EvalBeforeNestingBit> Type;
-};
-
-template<typename Lhs, typename Rhs>
-struct ProductReturnType<Lhs,Rhs,LazyCoeffBasedProductMode>
-{
-  typedef typename internal::nested<Lhs, Rhs::ColsAtCompileTime, typename internal::plain_matrix_type<Lhs>::type >::type LhsNested;
-  typedef typename internal::nested<Rhs, Lhs::RowsAtCompileTime, typename internal::plain_matrix_type<Rhs>::type >::type RhsNested;
-  typedef CoeffBasedProduct<LhsNested, RhsNested, NestByRefBit> Type;
-};
-
-// this is a workaround for sun CC
-template<typename Lhs, typename Rhs>
-struct LazyProductReturnType : public ProductReturnType<Lhs,Rhs,LazyCoeffBasedProductMode>
-{};
-
 /***********************************************************************
 *  Implementation of Inner Vector Vector Product
 ***********************************************************************/
@@ -187,119 +124,10 @@ struct LazyProductReturnType : public ProductReturnType<Lhs,Rhs,LazyCoeffBasedPr
 // product ends up to a row-vector times col-vector product... To tackle this use
 // case, we could have a specialization for Block<MatrixType,1,1> with: operator=(Scalar x);
 
-namespace internal {
-
-template<typename Lhs, typename Rhs>
-struct traits<GeneralProduct<Lhs,Rhs,InnerProduct> >
- : traits<Matrix<typename scalar_product_traits<typename Lhs::Scalar, typename Rhs::Scalar>::ReturnType,1,1> >
-{};
-
-}
-
-template<typename Lhs, typename Rhs>
-class GeneralProduct<Lhs, Rhs, InnerProduct>
-  : internal::no_assignment_operator,
-    public Matrix<typename internal::scalar_product_traits<typename Lhs::Scalar, typename Rhs::Scalar>::ReturnType,1,1>
-{
-    typedef Matrix<typename internal::scalar_product_traits<typename Lhs::Scalar, typename Rhs::Scalar>::ReturnType,1,1> Base;
-  public:
-    GeneralProduct(const Lhs& lhs, const Rhs& rhs)
-    {
-      EIGEN_STATIC_ASSERT((internal::is_same<typename Lhs::RealScalar, typename Rhs::RealScalar>::value),
-        YOU_MIXED_DIFFERENT_NUMERIC_TYPES__YOU_NEED_TO_USE_THE_CAST_METHOD_OF_MATRIXBASE_TO_CAST_NUMERIC_TYPES_EXPLICITLY)
-
-      Base::coeffRef(0,0) = (lhs.transpose().cwiseProduct(rhs)).sum();
-    }
-
-    /** Convertion to scalar */
-    operator const typename Base::Scalar() const {
-      return Base::coeff(0,0);
-    }
-};
-
 /***********************************************************************
 *  Implementation of Outer Vector Vector Product
 ***********************************************************************/
 
-namespace internal {
-
-// Column major
-template<typename ProductType, typename Dest, typename Func>
-EIGEN_DONT_INLINE void outer_product_selector_run(const ProductType& prod, Dest& dest, const Func& func, const false_type&)
-{
-  typedef typename Dest::Index Index;
-  // FIXME make sure lhs is sequentially stored
-  // FIXME not very good if rhs is real and lhs complex while alpha is real too
-  const Index cols = dest.cols();
-  for (Index j=0; j<cols; ++j)
-    func(dest.col(j), prod.rhs().coeff(0,j) * prod.lhs());
-}
-
-// Row major
-template<typename ProductType, typename Dest, typename Func>
-EIGEN_DONT_INLINE void outer_product_selector_run(const ProductType& prod, Dest& dest, const Func& func, const true_type&) {
-  typedef typename Dest::Index Index;
-  // FIXME make sure rhs is sequentially stored
-  // FIXME not very good if lhs is real and rhs complex while alpha is real too
-  const Index rows = dest.rows();
-  for (Index i=0; i<rows; ++i)
-    func(dest.row(i), prod.lhs().coeff(i,0) * prod.rhs());
-}
-
-template<typename Lhs, typename Rhs>
-struct traits<GeneralProduct<Lhs,Rhs,OuterProduct> >
- : traits<ProductBase<GeneralProduct<Lhs,Rhs,OuterProduct>, Lhs, Rhs> >
-{};
-
-}
-
-template<typename Lhs, typename Rhs>
-class GeneralProduct<Lhs, Rhs, OuterProduct>
-  : public ProductBase<GeneralProduct<Lhs,Rhs,OuterProduct>, Lhs, Rhs>
-{
-    template<typename T> struct is_row_major : internal::conditional<(int(T::Flags)&RowMajorBit), internal::true_type, internal::false_type>::type {};
-    
-  public:
-    EIGEN_PRODUCT_PUBLIC_INTERFACE(GeneralProduct)
-
-    GeneralProduct(const Lhs& lhs, const Rhs& rhs) : Base(lhs,rhs)
-    {
-      EIGEN_STATIC_ASSERT((internal::is_same<typename Lhs::RealScalar, typename Rhs::RealScalar>::value),
-        YOU_MIXED_DIFFERENT_NUMERIC_TYPES__YOU_NEED_TO_USE_THE_CAST_METHOD_OF_MATRIXBASE_TO_CAST_NUMERIC_TYPES_EXPLICITLY)
-    }
-    
-    struct set  { template<typename Dst, typename Src> void operator()(const Dst& dst, const Src& src) const { dst.const_cast_derived()  = src; } };
-    struct add  { template<typename Dst, typename Src> void operator()(const Dst& dst, const Src& src) const { dst.const_cast_derived() += src; } };
-    struct sub  { template<typename Dst, typename Src> void operator()(const Dst& dst, const Src& src) const { dst.const_cast_derived() -= src; } };
-    struct adds {
-      Scalar m_scale;
-      adds(const Scalar& s) : m_scale(s) {}
-      template<typename Dst, typename Src> void operator()(const Dst& dst, const Src& src) const {
-        dst.const_cast_derived() += m_scale * src;
-      }
-    };
-    
-    template<typename Dest>
-    inline void evalTo(Dest& dest) const {
-      internal::outer_product_selector_run(*this, dest, set(), is_row_major<Dest>());
-    }
-    
-    template<typename Dest>
-    inline void addTo(Dest& dest) const {
-      internal::outer_product_selector_run(*this, dest, add(), is_row_major<Dest>());
-    }
-
-    template<typename Dest>
-    inline void subTo(Dest& dest) const {
-      internal::outer_product_selector_run(*this, dest, sub(), is_row_major<Dest>());
-    }
-
-    template<typename Dest> void scaleAndAddTo(Dest& dest, const Scalar& alpha) const
-    {
-      internal::outer_product_selector_run(*this, dest, adds(alpha), is_row_major<Dest>());
-    }
-};
-
 /***********************************************************************
 *  Implementation of General Matrix Vector Product
 ***********************************************************************/
@@ -313,60 +141,13 @@ class GeneralProduct<Lhs, Rhs, OuterProduct>
  */
 namespace internal {
 
-template<typename Lhs, typename Rhs>
-struct traits<GeneralProduct<Lhs,Rhs,GemvProduct> >
- : traits<ProductBase<GeneralProduct<Lhs,Rhs,GemvProduct>, Lhs, Rhs> >
-{};
-
 template<int Side, int StorageOrder, bool BlasCompatible>
-struct gemv_selector;
+struct gemv_dense_selector;
 
 } // end namespace internal
 
-template<typename Lhs, typename Rhs>
-class GeneralProduct<Lhs, Rhs, GemvProduct>
-  : public ProductBase<GeneralProduct<Lhs,Rhs,GemvProduct>, Lhs, Rhs>
-{
-  public:
-    EIGEN_PRODUCT_PUBLIC_INTERFACE(GeneralProduct)
-
-    typedef typename Lhs::Scalar LhsScalar;
-    typedef typename Rhs::Scalar RhsScalar;
-
-    GeneralProduct(const Lhs& a_lhs, const Rhs& a_rhs) : Base(a_lhs,a_rhs)
-    {
-//       EIGEN_STATIC_ASSERT((internal::is_same<typename Lhs::Scalar, typename Rhs::Scalar>::value),
-//         YOU_MIXED_DIFFERENT_NUMERIC_TYPES__YOU_NEED_TO_USE_THE_CAST_METHOD_OF_MATRIXBASE_TO_CAST_NUMERIC_TYPES_EXPLICITLY)
-    }
-
-    enum { Side = Lhs::IsVectorAtCompileTime ? OnTheLeft : OnTheRight };
-    typedef typename internal::conditional<int(Side)==OnTheRight,_LhsNested,_RhsNested>::type MatrixType;
-
-    template<typename Dest> void scaleAndAddTo(Dest& dst, const Scalar& alpha) const
-    {
-      eigen_assert(m_lhs.rows() == dst.rows() && m_rhs.cols() == dst.cols());
-      internal::gemv_selector<Side,(int(MatrixType::Flags)&RowMajorBit) ? RowMajor : ColMajor,
-                       bool(internal::blas_traits<MatrixType>::HasUsableDirectAccess)>::run(*this, dst, alpha);
-    }
-};
-
 namespace internal {
 
-// The vector is on the left => transposition
-template<int StorageOrder, bool BlasCompatible>
-struct gemv_selector<OnTheLeft,StorageOrder,BlasCompatible>
-{
-  template<typename ProductType, typename Dest>
-  static void run(const ProductType& prod, Dest& dest, const typename ProductType::Scalar& alpha)
-  {
-    Transpose<Dest> destT(dest);
-    enum { OtherStorageOrder = StorageOrder == RowMajor ? ColMajor : RowMajor };
-    gemv_selector<OnTheRight,OtherStorageOrder,BlasCompatible>
-      ::run(GeneralProduct<Transpose<const typename ProductType::_RhsNested>,Transpose<const typename ProductType::_LhsNested>, GemvProduct>
-        (prod.rhs().transpose(), prod.lhs().transpose()), destT, alpha);
-  }
-};
-
 template<typename Scalar,int Size,int MaxSize,bool Cond> struct gemv_static_vector_if;
 
 template<typename Scalar,int Size,int MaxSize>
@@ -384,126 +165,161 @@ struct gemv_static_vector_if<Scalar,Size,Dynamic,true>
 template<typename Scalar,int Size,int MaxSize>
 struct gemv_static_vector_if<Scalar,Size,MaxSize,true>
 {
-  #if EIGEN_ALIGN_STATICALLY
-  internal::plain_array<Scalar,EIGEN_SIZE_MIN_PREFER_FIXED(Size,MaxSize),0> m_data;
-  EIGEN_STRONG_INLINE Scalar* data() { return m_data.array; }
-  #else
-  // Some architectures cannot align on the stack,
-  // => let's manually enforce alignment by allocating more data and return the address of the first aligned element.
   enum {
     ForceAlignment  = internal::packet_traits<Scalar>::Vectorizable,
     PacketSize      = internal::packet_traits<Scalar>::size
   };
-  internal::plain_array<Scalar,EIGEN_SIZE_MIN_PREFER_FIXED(Size,MaxSize)+(ForceAlignment?PacketSize:0),0> m_data;
+  #if EIGEN_MAX_STATIC_ALIGN_BYTES!=0
+  internal::plain_array<Scalar,EIGEN_SIZE_MIN_PREFER_FIXED(Size,MaxSize),0,EIGEN_PLAIN_ENUM_MIN(AlignedMax,PacketSize)> m_data;
+  EIGEN_STRONG_INLINE Scalar* data() { return m_data.array; }
+  #else
+  // Some architectures cannot align on the stack,
+  // => let's manually enforce alignment by allocating more data and return the address of the first aligned element.
+  internal::plain_array<Scalar,EIGEN_SIZE_MIN_PREFER_FIXED(Size,MaxSize)+(ForceAlignment?EIGEN_MAX_ALIGN_BYTES:0),0> m_data;
   EIGEN_STRONG_INLINE Scalar* data() {
     return ForceAlignment
-            ? reinterpret_cast<Scalar*>((reinterpret_cast<size_t>(m_data.array) & ~(size_t(15))) + 16)
+            ? reinterpret_cast<Scalar*>((internal::UIntPtr(m_data.array) & ~(std::size_t(EIGEN_MAX_ALIGN_BYTES-1))) + EIGEN_MAX_ALIGN_BYTES)
             : m_data.array;
   }
   #endif
 };
 
-template<> struct gemv_selector<OnTheRight,ColMajor,true>
+// The vector is on the left => transposition
+template<int StorageOrder, bool BlasCompatible>
+struct gemv_dense_selector<OnTheLeft,StorageOrder,BlasCompatible>
 {
-  template<typename ProductType, typename Dest>
-  static inline void run(const ProductType& prod, Dest& dest, const typename ProductType::Scalar& alpha)
+  template<typename Lhs, typename Rhs, typename Dest>
+  static void run(const Lhs &lhs, const Rhs &rhs, Dest& dest, const typename Dest::Scalar& alpha)
   {
-    typedef typename ProductType::Index Index;
-    typedef typename ProductType::LhsScalar   LhsScalar;
-    typedef typename ProductType::RhsScalar   RhsScalar;
-    typedef typename ProductType::Scalar      ResScalar;
-    typedef typename ProductType::RealScalar  RealScalar;
-    typedef typename ProductType::ActualLhsType ActualLhsType;
-    typedef typename ProductType::ActualRhsType ActualRhsType;
-    typedef typename ProductType::LhsBlasTraits LhsBlasTraits;
-    typedef typename ProductType::RhsBlasTraits RhsBlasTraits;
-    typedef Map<Matrix<ResScalar,Dynamic,1>, Aligned> MappedDest;
+    Transpose<Dest> destT(dest);
+    enum { OtherStorageOrder = StorageOrder == RowMajor ? ColMajor : RowMajor };
+    gemv_dense_selector<OnTheRight,OtherStorageOrder,BlasCompatible>
+      ::run(rhs.transpose(), lhs.transpose(), destT, alpha);
+  }
+};
 
-    ActualLhsType actualLhs = LhsBlasTraits::extract(prod.lhs());
-    ActualRhsType actualRhs = RhsBlasTraits::extract(prod.rhs());
+template<> struct gemv_dense_selector<OnTheRight,ColMajor,true>
+{
+  template<typename Lhs, typename Rhs, typename Dest>
+  static inline void run(const Lhs &lhs, const Rhs &rhs, Dest& dest, const typename Dest::Scalar& alpha)
+  {
+    typedef typename Lhs::Scalar   LhsScalar;
+    typedef typename Rhs::Scalar   RhsScalar;
+    typedef typename Dest::Scalar  ResScalar;
+    typedef typename Dest::RealScalar  RealScalar;
+    
+    typedef internal::blas_traits<Lhs> LhsBlasTraits;
+    typedef typename LhsBlasTraits::DirectLinearAccessType ActualLhsType;
+    typedef internal::blas_traits<Rhs> RhsBlasTraits;
+    typedef typename RhsBlasTraits::DirectLinearAccessType ActualRhsType;
+  
+    typedef Map<Matrix<ResScalar,Dynamic,1>, EIGEN_PLAIN_ENUM_MIN(AlignedMax,internal::packet_traits<ResScalar>::size)> MappedDest;
 
-    ResScalar actualAlpha = alpha * LhsBlasTraits::extractScalarFactor(prod.lhs())
-                                  * RhsBlasTraits::extractScalarFactor(prod.rhs());
+    ActualLhsType actualLhs = LhsBlasTraits::extract(lhs);
+    ActualRhsType actualRhs = RhsBlasTraits::extract(rhs);
+
+    ResScalar actualAlpha = alpha * LhsBlasTraits::extractScalarFactor(lhs)
+                                  * RhsBlasTraits::extractScalarFactor(rhs);
+
+    // make sure Dest is a compile-time vector type (bug 1166)
+    typedef typename conditional<Dest::IsVectorAtCompileTime, Dest, typename Dest::ColXpr>::type ActualDest;
 
     enum {
       // FIXME find a way to allow an inner stride on the result if packet_traits<Scalar>::size==1
       // on, the other hand it is good for the cache to pack the vector anyways...
-      EvalToDestAtCompileTime = Dest::InnerStrideAtCompileTime==1,
+      EvalToDestAtCompileTime = (ActualDest::InnerStrideAtCompileTime==1),
       ComplexByReal = (NumTraits<LhsScalar>::IsComplex) && (!NumTraits<RhsScalar>::IsComplex),
-      MightCannotUseDest = (Dest::InnerStrideAtCompileTime!=1) || ComplexByReal
+      MightCannotUseDest = (!EvalToDestAtCompileTime) || ComplexByReal
     };
 
-    gemv_static_vector_if<ResScalar,Dest::SizeAtCompileTime,Dest::MaxSizeAtCompileTime,MightCannotUseDest> static_dest;
-
-    bool alphaIsCompatible = (!ComplexByReal) || (numext::imag(actualAlpha)==RealScalar(0));
-    bool evalToDest = EvalToDestAtCompileTime && alphaIsCompatible;
-    
+    typedef const_blas_data_mapper<LhsScalar,Index,ColMajor> LhsMapper;
+    typedef const_blas_data_mapper<RhsScalar,Index,RowMajor> RhsMapper;
     RhsScalar compatibleAlpha = get_factor<ResScalar,RhsScalar>::run(actualAlpha);
 
-    ei_declare_aligned_stack_constructed_variable(ResScalar,actualDestPtr,dest.size(),
-                                                  evalToDest ? dest.data() : static_dest.data());
-    
-    if(!evalToDest)
+    if(!MightCannotUseDest)
     {
-      #ifdef EIGEN_DENSE_STORAGE_CTOR_PLUGIN
-      int size = dest.size();
-      EIGEN_DENSE_STORAGE_CTOR_PLUGIN
-      #endif
-      if(!alphaIsCompatible)
-      {
-        MappedDest(actualDestPtr, dest.size()).setZero();
-        compatibleAlpha = RhsScalar(1);
-      }
-      else
-        MappedDest(actualDestPtr, dest.size()) = dest;
+      // shortcut if we are sure to be able to use dest directly,
+      // this ease the compiler to generate cleaner and more optimzized code for most common cases
+      general_matrix_vector_product
+          <Index,LhsScalar,LhsMapper,ColMajor,LhsBlasTraits::NeedToConjugate,RhsScalar,RhsMapper,RhsBlasTraits::NeedToConjugate>::run(
+          actualLhs.rows(), actualLhs.cols(),
+          LhsMapper(actualLhs.data(), actualLhs.outerStride()),
+          RhsMapper(actualRhs.data(), actualRhs.innerStride()),
+          dest.data(), 1,
+          compatibleAlpha);
     }
-
-    general_matrix_vector_product
-      <Index,LhsScalar,ColMajor,LhsBlasTraits::NeedToConjugate,RhsScalar,RhsBlasTraits::NeedToConjugate>::run(
-        actualLhs.rows(), actualLhs.cols(),
-        actualLhs.data(), actualLhs.outerStride(),
-        actualRhs.data(), actualRhs.innerStride(),
-        actualDestPtr, 1,
-        compatibleAlpha);
-
-    if (!evalToDest)
+    else
     {
-      if(!alphaIsCompatible)
-        dest += actualAlpha * MappedDest(actualDestPtr, dest.size());
-      else
-        dest = MappedDest(actualDestPtr, dest.size());
+      gemv_static_vector_if<ResScalar,ActualDest::SizeAtCompileTime,ActualDest::MaxSizeAtCompileTime,MightCannotUseDest> static_dest;
+
+      const bool alphaIsCompatible = (!ComplexByReal) || (numext::imag(actualAlpha)==RealScalar(0));
+      const bool evalToDest = EvalToDestAtCompileTime && alphaIsCompatible;
+
+      ei_declare_aligned_stack_constructed_variable(ResScalar,actualDestPtr,dest.size(),
+                                                    evalToDest ? dest.data() : static_dest.data());
+
+      if(!evalToDest)
+      {
+        #ifdef EIGEN_DENSE_STORAGE_CTOR_PLUGIN
+        Index size = dest.size();
+        EIGEN_DENSE_STORAGE_CTOR_PLUGIN
+        #endif
+        if(!alphaIsCompatible)
+        {
+          MappedDest(actualDestPtr, dest.size()).setZero();
+          compatibleAlpha = RhsScalar(1);
+        }
+        else
+          MappedDest(actualDestPtr, dest.size()) = dest;
+      }
+
+      general_matrix_vector_product
+          <Index,LhsScalar,LhsMapper,ColMajor,LhsBlasTraits::NeedToConjugate,RhsScalar,RhsMapper,RhsBlasTraits::NeedToConjugate>::run(
+          actualLhs.rows(), actualLhs.cols(),
+          LhsMapper(actualLhs.data(), actualLhs.outerStride()),
+          RhsMapper(actualRhs.data(), actualRhs.innerStride()),
+          actualDestPtr, 1,
+          compatibleAlpha);
+
+      if (!evalToDest)
+      {
+        if(!alphaIsCompatible)
+          dest.matrix() += actualAlpha * MappedDest(actualDestPtr, dest.size());
+        else
+          dest = MappedDest(actualDestPtr, dest.size());
+      }
     }
   }
 };
 
-template<> struct gemv_selector<OnTheRight,RowMajor,true>
+template<> struct gemv_dense_selector<OnTheRight,RowMajor,true>
 {
-  template<typename ProductType, typename Dest>
-  static void run(const ProductType& prod, Dest& dest, const typename ProductType::Scalar& alpha)
+  template<typename Lhs, typename Rhs, typename Dest>
+  static void run(const Lhs &lhs, const Rhs &rhs, Dest& dest, const typename Dest::Scalar& alpha)
   {
-    typedef typename ProductType::LhsScalar LhsScalar;
-    typedef typename ProductType::RhsScalar RhsScalar;
-    typedef typename ProductType::Scalar    ResScalar;
-    typedef typename ProductType::Index Index;
-    typedef typename ProductType::ActualLhsType ActualLhsType;
-    typedef typename ProductType::ActualRhsType ActualRhsType;
-    typedef typename ProductType::_ActualRhsType _ActualRhsType;
-    typedef typename ProductType::LhsBlasTraits LhsBlasTraits;
-    typedef typename ProductType::RhsBlasTraits RhsBlasTraits;
+    typedef typename Lhs::Scalar   LhsScalar;
+    typedef typename Rhs::Scalar   RhsScalar;
+    typedef typename Dest::Scalar  ResScalar;
+    
+    typedef internal::blas_traits<Lhs> LhsBlasTraits;
+    typedef typename LhsBlasTraits::DirectLinearAccessType ActualLhsType;
+    typedef internal::blas_traits<Rhs> RhsBlasTraits;
+    typedef typename RhsBlasTraits::DirectLinearAccessType ActualRhsType;
+    typedef typename internal::remove_all<ActualRhsType>::type ActualRhsTypeCleaned;
 
-    typename add_const<ActualLhsType>::type actualLhs = LhsBlasTraits::extract(prod.lhs());
-    typename add_const<ActualRhsType>::type actualRhs = RhsBlasTraits::extract(prod.rhs());
+    typename add_const<ActualLhsType>::type actualLhs = LhsBlasTraits::extract(lhs);
+    typename add_const<ActualRhsType>::type actualRhs = RhsBlasTraits::extract(rhs);
 
-    ResScalar actualAlpha = alpha * LhsBlasTraits::extractScalarFactor(prod.lhs())
-                                  * RhsBlasTraits::extractScalarFactor(prod.rhs());
+    ResScalar actualAlpha = alpha * LhsBlasTraits::extractScalarFactor(lhs)
+                                  * RhsBlasTraits::extractScalarFactor(rhs);
 
     enum {
       // FIXME find a way to allow an inner stride on the result if packet_traits<Scalar>::size==1
       // on, the other hand it is good for the cache to pack the vector anyways...
-      DirectlyUseRhs = _ActualRhsType::InnerStrideAtCompileTime==1
+      DirectlyUseRhs = ActualRhsTypeCleaned::InnerStrideAtCompileTime==1
     };
 
-    gemv_static_vector_if<RhsScalar,_ActualRhsType::SizeAtCompileTime,_ActualRhsType::MaxSizeAtCompileTime,!DirectlyUseRhs> static_rhs;
+    gemv_static_vector_if<RhsScalar,ActualRhsTypeCleaned::SizeAtCompileTime,ActualRhsTypeCleaned::MaxSizeAtCompileTime,!DirectlyUseRhs> static_rhs;
 
     ei_declare_aligned_stack_constructed_variable(RhsScalar,actualRhsPtr,actualRhs.size(),
         DirectlyUseRhs ? const_cast<RhsScalar*>(actualRhs.data()) : static_rhs.data());
@@ -511,45 +327,48 @@ template<> struct gemv_selector<OnTheRight,RowMajor,true>
     if(!DirectlyUseRhs)
     {
       #ifdef EIGEN_DENSE_STORAGE_CTOR_PLUGIN
-      int size = actualRhs.size();
+      Index size = actualRhs.size();
       EIGEN_DENSE_STORAGE_CTOR_PLUGIN
       #endif
-      Map<typename _ActualRhsType::PlainObject>(actualRhsPtr, actualRhs.size()) = actualRhs;
+      Map<typename ActualRhsTypeCleaned::PlainObject>(actualRhsPtr, actualRhs.size()) = actualRhs;
     }
 
+    typedef const_blas_data_mapper<LhsScalar,Index,RowMajor> LhsMapper;
+    typedef const_blas_data_mapper<RhsScalar,Index,ColMajor> RhsMapper;
     general_matrix_vector_product
-      <Index,LhsScalar,RowMajor,LhsBlasTraits::NeedToConjugate,RhsScalar,RhsBlasTraits::NeedToConjugate>::run(
+        <Index,LhsScalar,LhsMapper,RowMajor,LhsBlasTraits::NeedToConjugate,RhsScalar,RhsMapper,RhsBlasTraits::NeedToConjugate>::run(
         actualLhs.rows(), actualLhs.cols(),
-        actualLhs.data(), actualLhs.outerStride(),
-        actualRhsPtr, 1,
-        dest.data(), dest.innerStride(),
+        LhsMapper(actualLhs.data(), actualLhs.outerStride()),
+        RhsMapper(actualRhsPtr, 1),
+        dest.data(), dest.col(0).innerStride(), //NOTE  if dest is not a vector at compile-time, then dest.innerStride() might be wrong. (bug 1166)
         actualAlpha);
   }
 };
 
-template<> struct gemv_selector<OnTheRight,ColMajor,false>
+template<> struct gemv_dense_selector<OnTheRight,ColMajor,false>
 {
-  template<typename ProductType, typename Dest>
-  static void run(const ProductType& prod, Dest& dest, const typename ProductType::Scalar& alpha)
+  template<typename Lhs, typename Rhs, typename Dest>
+  static void run(const Lhs &lhs, const Rhs &rhs, Dest& dest, const typename Dest::Scalar& alpha)
   {
-    typedef typename Dest::Index Index;
-    // TODO makes sure dest is sequentially stored in memory, otherwise use a temp
-    const Index size = prod.rhs().rows();
+    EIGEN_STATIC_ASSERT((!nested_eval<Lhs,1>::Evaluate),EIGEN_INTERNAL_COMPILATION_ERROR_OR_YOU_MADE_A_PROGRAMMING_MISTAKE);
+    // TODO if rhs is large enough it might be beneficial to make sure that dest is sequentially stored in memory, otherwise use a temp
+    typename nested_eval<Rhs,1>::type actual_rhs(rhs);
+    const Index size = rhs.rows();
     for(Index k=0; k<size; ++k)
-      dest += (alpha*prod.rhs().coeff(k)) * prod.lhs().col(k);
+      dest += (alpha*actual_rhs.coeff(k)) * lhs.col(k);
   }
 };
 
-template<> struct gemv_selector<OnTheRight,RowMajor,false>
+template<> struct gemv_dense_selector<OnTheRight,RowMajor,false>
 {
-  template<typename ProductType, typename Dest>
-  static void run(const ProductType& prod, Dest& dest, const typename ProductType::Scalar& alpha)
+  template<typename Lhs, typename Rhs, typename Dest>
+  static void run(const Lhs &lhs, const Rhs &rhs, Dest& dest, const typename Dest::Scalar& alpha)
   {
-    typedef typename Dest::Index Index;
-    // TODO makes sure rhs is sequentially stored in memory, otherwise use a temp
-    const Index rows = prod.rows();
+    EIGEN_STATIC_ASSERT((!nested_eval<Lhs,1>::Evaluate),EIGEN_INTERNAL_COMPILATION_ERROR_OR_YOU_MADE_A_PROGRAMMING_MISTAKE);
+    typename nested_eval<Rhs,Lhs::RowsAtCompileTime>::type actual_rhs(rhs);
+    const Index rows = dest.rows();
     for(Index i=0; i<rows; ++i)
-      dest.coeffRef(i) += alpha * (prod.lhs().row(i).cwiseProduct(prod.rhs().transpose())).sum();
+      dest.coeffRef(i) += alpha * (lhs.row(i).cwiseProduct(actual_rhs.transpose())).sum();
   }
 };
 
@@ -567,7 +386,7 @@ template<> struct gemv_selector<OnTheRight,RowMajor,false>
   */
 template<typename Derived>
 template<typename OtherDerived>
-inline const typename ProductReturnType<Derived, OtherDerived>::Type
+inline const Product<Derived, OtherDerived>
 MatrixBase<Derived>::operator*(const MatrixBase<OtherDerived> &other) const
 {
   // A note regarding the function declaration: In MSVC, this function will sometimes
@@ -592,7 +411,8 @@ MatrixBase<Derived>::operator*(const MatrixBase<OtherDerived> &other) const
 #ifdef EIGEN_DEBUG_PRODUCT
   internal::product_type<Derived,OtherDerived>::debug();
 #endif
-  return typename ProductReturnType<Derived,OtherDerived>::Type(derived(), other.derived());
+
+  return Product<Derived, OtherDerived>(derived(), other.derived());
 }
 
 /** \returns an expression of the matrix product of \c *this and \a other without implicit evaluation.
@@ -608,7 +428,7 @@ MatrixBase<Derived>::operator*(const MatrixBase<OtherDerived> &other) const
   */
 template<typename Derived>
 template<typename OtherDerived>
-const typename LazyProductReturnType<Derived,OtherDerived>::Type
+const Product<Derived,OtherDerived,LazyProduct>
 MatrixBase<Derived>::lazyProduct(const MatrixBase<OtherDerived> &other) const
 {
   enum {
@@ -627,7 +447,7 @@ MatrixBase<Derived>::lazyProduct(const MatrixBase<OtherDerived> &other) const
     INVALID_MATRIX_PRODUCT__IF_YOU_WANTED_A_COEFF_WISE_PRODUCT_YOU_MUST_USE_THE_EXPLICIT_FUNCTION)
   EIGEN_STATIC_ASSERT(ProductIsValid || SameSizes, INVALID_MATRIX_PRODUCT)
 
-  return typename LazyProductReturnType<Derived,OtherDerived>::Type(derived(), other.derived());
+  return Product<Derived,OtherDerived,LazyProduct>(derived(), other.derived());
 }
 
 } // end namespace Eigen

extern/Eigen3/Eigen/src/Core/GenericPacketMath.h

@@ -42,21 +42,28 @@ namespace internal {
 struct default_packet_traits
 {
   enum {
+    HasHalfPacket = 0,
+
     HasAdd    = 1,
     HasSub    = 1,
     HasMul    = 1,
     HasNegate = 1,
     HasAbs    = 1,
+    HasArg    = 0,
     HasAbs2   = 1,
     HasMin    = 1,
     HasMax    = 1,
     HasConj   = 1,
     HasSetLinear = 1,
+    HasBlend  = 0,
 
     HasDiv    = 0,
     HasSqrt   = 0,
+    HasRsqrt  = 0,
     HasExp    = 0,
     HasLog    = 0,
+    HasLog1p  = 0,
+    HasLog10  = 0,
     HasPow    = 0,
 
     HasSin    = 0,
@@ -64,17 +71,37 @@ struct default_packet_traits
     HasTan    = 0,
     HasASin   = 0,
     HasACos   = 0,
-    HasATan   = 0
+    HasATan   = 0,
+    HasSinh   = 0,
+    HasCosh   = 0,
+    HasTanh   = 0,
+    HasLGamma = 0,
+    HasDiGamma = 0,
+    HasZeta = 0,
+    HasPolygamma = 0,
+    HasErf = 0,
+    HasErfc = 0,
+    HasIGamma = 0,
+    HasIGammac = 0,
+    HasBetaInc = 0,
+
+    HasRound  = 0,
+    HasFloor  = 0,
+    HasCeil   = 0,
+
+    HasSign   = 0
   };
 };
 
 template<typename T> struct packet_traits : default_packet_traits
 {
   typedef T type;
+  typedef T half;
   enum {
     Vectorizable = 0,
     size = 1,
-    AlignedOnScalar = 0
+    AlignedOnScalar = 0,
+    HasHalfPacket = 0
   };
   enum {
     HasAdd    = 0,
@@ -90,135 +117,239 @@ template<typename T> struct packet_traits : default_packet_traits
   };
 };
 
+template<typename T> struct packet_traits<const T> : packet_traits<T> { };
+
+template <typename Src, typename Tgt> struct type_casting_traits {
+  enum {
+    VectorizedCast = 0,
+    SrcCoeffRatio = 1,
+    TgtCoeffRatio = 1
+  };
+};
+
+
+/** \internal \returns static_cast<TgtType>(a) (coeff-wise) */
+template <typename SrcPacket, typename TgtPacket>
+EIGEN_DEVICE_FUNC inline TgtPacket
+pcast(const SrcPacket& a) {
+  return static_cast<TgtPacket>(a);
+}
+template <typename SrcPacket, typename TgtPacket>
+EIGEN_DEVICE_FUNC inline TgtPacket
+pcast(const SrcPacket& a, const SrcPacket& /*b*/) {
+  return static_cast<TgtPacket>(a);
+}
+
+template <typename SrcPacket, typename TgtPacket>
+EIGEN_DEVICE_FUNC inline TgtPacket
+pcast(const SrcPacket& a, const SrcPacket& /*b*/, const SrcPacket& /*c*/, const SrcPacket& /*d*/) {
+  return static_cast<TgtPacket>(a);
+}
+
 /** \internal \returns a + b (coeff-wise) */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 padd(const Packet& a,
         const Packet& b) { return a+b; }
 
 /** \internal \returns a - b (coeff-wise) */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 psub(const Packet& a,
         const Packet& b) { return a-b; }
 
 /** \internal \returns -a (coeff-wise) */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 pnegate(const Packet& a) { return -a; }
 
 /** \internal \returns conj(a) (coeff-wise) */
-template<typename Packet> inline Packet
+
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 pconj(const Packet& a) { return numext::conj(a); }
 
 /** \internal \returns a * b (coeff-wise) */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 pmul(const Packet& a,
         const Packet& b) { return a*b; }
 
 /** \internal \returns a / b (coeff-wise) */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 pdiv(const Packet& a,
         const Packet& b) { return a/b; }
 
 /** \internal \returns the min of \a a and \a b  (coeff-wise) */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 pmin(const Packet& a,
-        const Packet& b) { using std::min; return (min)(a, b); }
+        const Packet& b) { return numext::mini(a, b); }
 
 /** \internal \returns the max of \a a and \a b  (coeff-wise) */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 pmax(const Packet& a,
-        const Packet& b) { using std::max; return (max)(a, b); }
+        const Packet& b) { return numext::maxi(a, b); }
 
 /** \internal \returns the absolute value of \a a */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 pabs(const Packet& a) { using std::abs; return abs(a); }
 
+/** \internal \returns the phase angle of \a a */
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
+parg(const Packet& a) { using numext::arg; return arg(a); }
+
 /** \internal \returns the bitwise and of \a a and \a b */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 pand(const Packet& a, const Packet& b) { return a & b; }
 
 /** \internal \returns the bitwise or of \a a and \a b */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 por(const Packet& a, const Packet& b) { return a | b; }
 
 /** \internal \returns the bitwise xor of \a a and \a b */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 pxor(const Packet& a, const Packet& b) { return a ^ b; }
 
 /** \internal \returns the bitwise andnot of \a a and \a b */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 pandnot(const Packet& a, const Packet& b) { return a & (!b); }
 
 /** \internal \returns a packet version of \a *from, from must be 16 bytes aligned */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 pload(const typename unpacket_traits<Packet>::type* from) { return *from; }
 
 /** \internal \returns a packet version of \a *from, (un-aligned load) */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 ploadu(const typename unpacket_traits<Packet>::type* from) { return *from; }
 
-/** \internal \returns a packet with elements of \a *from duplicated.
-  * For instance, for a packet of 8 elements, 4 scalar will be read from \a *from and
-  * duplicated to form: {from[0],from[0],from[1],from[1],,from[2],from[2],,from[3],from[3]}
-  * Currently, this function is only used for scalar * complex products.
- */
-template<typename Packet> inline Packet
-ploaddup(const typename unpacket_traits<Packet>::type* from) { return *from; }
-
 /** \internal \returns a packet with constant coefficients \a a, e.g.: (a,a,a,a) */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 pset1(const typename unpacket_traits<Packet>::type& a) { return a; }
 
+/** \internal \returns a packet with constant coefficients \a a[0], e.g.: (a[0],a[0],a[0],a[0]) */
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
+pload1(const typename unpacket_traits<Packet>::type  *a) { return pset1<Packet>(*a); }
+
+/** \internal \returns a packet with elements of \a *from duplicated.
+  * For instance, for a packet of 8 elements, 4 scalars will be read from \a *from and
+  * duplicated to form: {from[0],from[0],from[1],from[1],from[2],from[2],from[3],from[3]}
+  * Currently, this function is only used for scalar * complex products.
+  */
+template<typename Packet> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Packet
+ploaddup(const typename unpacket_traits<Packet>::type* from) { return *from; }
+
+/** \internal \returns a packet with elements of \a *from quadrupled.
+  * For instance, for a packet of 8 elements, 2 scalars will be read from \a *from and
+  * replicated to form: {from[0],from[0],from[0],from[0],from[1],from[1],from[1],from[1]}
+  * Currently, this function is only used in matrix products.
+  * For packet-size smaller or equal to 4, this function is equivalent to pload1 
+  */
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
+ploadquad(const typename unpacket_traits<Packet>::type* from)
+{ return pload1<Packet>(from); }
+
+/** \internal equivalent to
+  * \code
+  * a0 = pload1(a+0);
+  * a1 = pload1(a+1);
+  * a2 = pload1(a+2);
+  * a3 = pload1(a+3);
+  * \endcode
+  * \sa pset1, pload1, ploaddup, pbroadcast2
+  */
+template<typename Packet> EIGEN_DEVICE_FUNC
+inline void pbroadcast4(const typename unpacket_traits<Packet>::type *a,
+                        Packet& a0, Packet& a1, Packet& a2, Packet& a3)
+{
+  a0 = pload1<Packet>(a+0);
+  a1 = pload1<Packet>(a+1);
+  a2 = pload1<Packet>(a+2);
+  a3 = pload1<Packet>(a+3);
+}
+
+/** \internal equivalent to
+  * \code
+  * a0 = pload1(a+0);
+  * a1 = pload1(a+1);
+  * \endcode
+  * \sa pset1, pload1, ploaddup, pbroadcast4
+  */
+template<typename Packet> EIGEN_DEVICE_FUNC
+inline void pbroadcast2(const typename unpacket_traits<Packet>::type *a,
+                        Packet& a0, Packet& a1)
+{
+  a0 = pload1<Packet>(a+0);
+  a1 = pload1<Packet>(a+1);
+}
+
 /** \internal \brief Returns a packet with coefficients (a,a+1,...,a+packet_size-1). */
-template<typename Scalar> inline typename packet_traits<Scalar>::type
-plset(const Scalar& a) { return a; }
+template<typename Packet> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Packet
+plset(const typename unpacket_traits<Packet>::type& a) { return a; }
 
 /** \internal copy the packet \a from to \a *to, \a to must be 16 bytes aligned */
-template<typename Scalar, typename Packet> inline void pstore(Scalar* to, const Packet& from)
+template<typename Scalar, typename Packet> EIGEN_DEVICE_FUNC inline void pstore(Scalar* to, const Packet& from)
 { (*to) = from; }
 
 /** \internal copy the packet \a from to \a *to, (un-aligned store) */
-template<typename Scalar, typename Packet> inline void pstoreu(Scalar* to, const Packet& from)
-{ (*to) = from; }
+template<typename Scalar, typename Packet> EIGEN_DEVICE_FUNC inline void pstoreu(Scalar* to, const Packet& from)
+{  (*to) = from; }
+
+ template<typename Scalar, typename Packet> EIGEN_DEVICE_FUNC inline Packet pgather(const Scalar* from, Index /*stride*/)
+ { return ploadu<Packet>(from); }
+
+ template<typename Scalar, typename Packet> EIGEN_DEVICE_FUNC inline void pscatter(Scalar* to, const Packet& from, Index /*stride*/)
+ { pstore(to, from); }
 
 /** \internal tries to do cache prefetching of \a addr */
-template<typename Scalar> inline void prefetch(const Scalar* addr)
+template<typename Scalar> EIGEN_DEVICE_FUNC inline void prefetch(const Scalar* addr)
 {
-#if !defined(_MSC_VER)
-__builtin_prefetch(addr);
+#ifdef __CUDA_ARCH__
+#if defined(__LP64__)
+  // 64-bit pointer operand constraint for inlined asm
+  asm(" prefetch.L1 [ %1 ];" : "=l"(addr) : "l"(addr));
+#else
+  // 32-bit pointer operand constraint for inlined asm
+  asm(" prefetch.L1 [ %1 ];" : "=r"(addr) : "r"(addr));
+#endif
+#elif (!EIGEN_COMP_MSVC) && (EIGEN_COMP_GNUC || EIGEN_COMP_CLANG || EIGEN_COMP_ICC)
+  __builtin_prefetch(addr);
 #endif
 }
 
 /** \internal \returns the first element of a packet */
-template<typename Packet> inline typename unpacket_traits<Packet>::type pfirst(const Packet& a)
+template<typename Packet> EIGEN_DEVICE_FUNC inline typename unpacket_traits<Packet>::type pfirst(const Packet& a)
 { return a; }
 
 /** \internal \returns a packet where the element i contains the sum of the packet of \a vec[i] */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 preduxp(const Packet* vecs) { return vecs[0]; }
 
 /** \internal \returns the sum of the elements of \a a*/
-template<typename Packet> inline typename unpacket_traits<Packet>::type predux(const Packet& a)
+template<typename Packet> EIGEN_DEVICE_FUNC inline typename unpacket_traits<Packet>::type predux(const Packet& a)
+{ return a; }
+
+/** \internal \returns the sum of the elements of \a a by block of 4 elements.
+  * For a packet {a0, a1, a2, a3, a4, a5, a6, a7}, it returns a half packet {a0+a4, a1+a5, a2+a6, a3+a7}
+  * For packet-size smaller or equal to 4, this boils down to a noop.
+  */
+template<typename Packet> EIGEN_DEVICE_FUNC inline
+typename conditional<(unpacket_traits<Packet>::size%8)==0,typename unpacket_traits<Packet>::half,Packet>::type
+predux_downto4(const Packet& a)
 { return a; }
 
 /** \internal \returns the product of the elements of \a a*/
-template<typename Packet> inline typename unpacket_traits<Packet>::type predux_mul(const Packet& a)
+template<typename Packet> EIGEN_DEVICE_FUNC inline typename unpacket_traits<Packet>::type predux_mul(const Packet& a)
 { return a; }
 
 /** \internal \returns the min of the elements of \a a*/
-template<typename Packet> inline typename unpacket_traits<Packet>::type predux_min(const Packet& a)
+template<typename Packet> EIGEN_DEVICE_FUNC inline typename unpacket_traits<Packet>::type predux_min(const Packet& a)
 { return a; }
 
 /** \internal \returns the max of the elements of \a a*/
-template<typename Packet> inline typename unpacket_traits<Packet>::type predux_max(const Packet& a)
+template<typename Packet> EIGEN_DEVICE_FUNC inline typename unpacket_traits<Packet>::type predux_max(const Packet& a)
 { return a; }
 
 /** \internal \returns the reversed elements of \a a*/
-template<typename Packet> inline Packet preverse(const Packet& a)
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet preverse(const Packet& a)
 { return a; }
 
-
 /** \internal \returns \a a with real and imaginary part flipped (for complex type only) */
-template<typename Packet> inline Packet pcplxflip(const Packet& a)
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet pcplxflip(const Packet& a)
 {
   // FIXME: uncomment the following in case we drop the internal imag and real functions.
 //   using std::imag;
@@ -250,6 +381,22 @@ Packet pasin(const Packet& a) { using std::asin; return asin(a); }
 template<typename Packet> EIGEN_DECLARE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS
 Packet pacos(const Packet& a) { using std::acos; return acos(a); }
 
+/** \internal \returns the arc tangent of \a a (coeff-wise) */
+template<typename Packet> EIGEN_DECLARE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS
+Packet patan(const Packet& a) { using std::atan; return atan(a); }
+
+/** \internal \returns the hyperbolic sine of \a a (coeff-wise) */
+template<typename Packet> EIGEN_DECLARE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS
+Packet psinh(const Packet& a) { using std::sinh; return sinh(a); }
+
+/** \internal \returns the hyperbolic cosine of \a a (coeff-wise) */
+template<typename Packet> EIGEN_DECLARE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS
+Packet pcosh(const Packet& a) { using std::cosh; return cosh(a); }
+
+/** \internal \returns the hyperbolic tan of \a a (coeff-wise) */
+template<typename Packet> EIGEN_DECLARE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS
+Packet ptanh(const Packet& a) { using std::tanh; return tanh(a); }
+
 /** \internal \returns the exp of \a a (coeff-wise) */
 template<typename Packet> EIGEN_DECLARE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS
 Packet pexp(const Packet& a) { using std::exp; return exp(a); }
@@ -258,10 +405,36 @@ Packet pexp(const Packet& a) { using std::exp; return exp(a); }
 template<typename Packet> EIGEN_DECLARE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS
 Packet plog(const Packet& a) { using std::log; return log(a); }
 
+/** \internal \returns the log1p of \a a (coeff-wise) */
+template<typename Packet> EIGEN_DECLARE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS
+Packet plog1p(const Packet& a) { return numext::log1p(a); }
+
+/** \internal \returns the log10 of \a a (coeff-wise) */
+template<typename Packet> EIGEN_DECLARE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS
+Packet plog10(const Packet& a) { using std::log10; return log10(a); }
+
 /** \internal \returns the square-root of \a a (coeff-wise) */
 template<typename Packet> EIGEN_DECLARE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS
 Packet psqrt(const Packet& a) { using std::sqrt; return sqrt(a); }
 
+/** \internal \returns the reciprocal square-root of \a a (coeff-wise) */
+template<typename Packet> EIGEN_DECLARE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS
+Packet prsqrt(const Packet& a) {
+  return pdiv(pset1<Packet>(1), psqrt(a));
+}
+
+/** \internal \returns the rounded value of \a a (coeff-wise) */
+template<typename Packet> EIGEN_DECLARE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS
+Packet pround(const Packet& a) { using numext::round; return round(a); }
+
+/** \internal \returns the floor of \a a (coeff-wise) */
+template<typename Packet> EIGEN_DECLARE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS
+Packet pfloor(const Packet& a) { using numext::floor; return floor(a); }
+
+/** \internal \returns the ceil of \a a (coeff-wise) */
+template<typename Packet> EIGEN_DECLARE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS
+Packet pceil(const Packet& a) { using numext::ceil; return ceil(a); }
+
 /***************************************************************************
 * The following functions might not have to be overwritten for vectorized types
 ***************************************************************************/
@@ -275,34 +448,45 @@ inline void pstore1(typename unpacket_traits<Packet>::type* to, const typename u
 }
 
 /** \internal \returns a * b + c (coeff-wise) */
-template<typename Packet> inline Packet
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
 pmadd(const Packet&  a,
          const Packet&  b,
          const Packet&  c)
 { return padd(pmul(a, b),c); }
 
 /** \internal \returns a packet version of \a *from.
-  * If LoadMode equals #Aligned, \a from must be 16 bytes aligned */
-template<typename Packet, int LoadMode>
-inline Packet ploadt(const typename unpacket_traits<Packet>::type* from)
+  * The pointer \a from must be aligned on a \a Alignment bytes boundary. */
+template<typename Packet, int Alignment>
+EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE Packet ploadt(const typename unpacket_traits<Packet>::type* from)
 {
-  if(LoadMode == Aligned)
+  if(Alignment >= unpacket_traits<Packet>::alignment)
     return pload<Packet>(from);
   else
     return ploadu<Packet>(from);
 }
 
 /** \internal copy the packet \a from to \a *to.
-  * If StoreMode equals #Aligned, \a to must be 16 bytes aligned */
-template<typename Scalar, typename Packet, int LoadMode>
-inline void pstoret(Scalar* to, const Packet& from)
+  * The pointer \a from must be aligned on a \a Alignment bytes boundary. */
+template<typename Scalar, typename Packet, int Alignment>
+EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE void pstoret(Scalar* to, const Packet& from)
 {
-  if(LoadMode == Aligned)
+  if(Alignment >= unpacket_traits<Packet>::alignment)
     pstore(to, from);
   else
     pstoreu(to, from);
 }
 
+/** \internal \returns a packet version of \a *from.
+  * Unlike ploadt, ploadt_ro takes advantage of the read-only memory path on the
+  * hardware if available to speedup the loading of data that won't be modified
+  * by the current computation.
+  */
+template<typename Packet, int LoadMode>
+EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE Packet ploadt_ro(const typename unpacket_traits<Packet>::type* from)
+{
+  return ploadt<Packet, LoadMode>(from);
+}
+
 /** \internal default implementation of palign() allowing partial specialization */
 template<int Offset,typename PacketType>
 struct palign_impl
@@ -336,15 +520,74 @@ inline void palign(PacketType& first, const PacketType& second)
 * Fast complex products (GCC generates a function call which is very slow)
 ***************************************************************************/
 
+// Eigen+CUDA does not support complexes.
+#ifndef __CUDACC__
+
 template<> inline std::complex<float> pmul(const std::complex<float>& a, const std::complex<float>& b)
 { return std::complex<float>(real(a)*real(b) - imag(a)*imag(b), imag(a)*real(b) + real(a)*imag(b)); }
 
 template<> inline std::complex<double> pmul(const std::complex<double>& a, const std::complex<double>& b)
 { return std::complex<double>(real(a)*real(b) - imag(a)*imag(b), imag(a)*real(b) + real(a)*imag(b)); }
 
+#endif
+
+
+/***************************************************************************
+ * PacketBlock, that is a collection of N packets where the number of words
+ * in the packet is a multiple of N.
+***************************************************************************/
+template <typename Packet,int N=unpacket_traits<Packet>::size> struct PacketBlock {
+  Packet packet[N];
+};
+
+template<typename Packet> EIGEN_DEVICE_FUNC inline void
+ptranspose(PacketBlock<Packet,1>& /*kernel*/) {
+  // Nothing to do in the scalar case, i.e. a 1x1 matrix.
+}
+
+/***************************************************************************
+ * Selector, i.e. vector of N boolean values used to select (i.e. blend)
+ * words from 2 packets.
+***************************************************************************/
+template <size_t N> struct Selector {
+  bool select[N];
+};
+
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
+pblend(const Selector<unpacket_traits<Packet>::size>& ifPacket, const Packet& thenPacket, const Packet& elsePacket) {
+  return ifPacket.select[0] ? thenPacket : elsePacket;
+}
+
+/** \internal \returns \a a with the first coefficient replaced by the scalar b */
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
+pinsertfirst(const Packet& a, typename unpacket_traits<Packet>::type b)
+{
+  // Default implementation based on pblend.
+  // It must be specialized for higher performance.
+  Selector<unpacket_traits<Packet>::size> mask;
+  mask.select[0] = true;
+  // This for loop should be optimized away by the compiler.
+  for(Index i=1; i<unpacket_traits<Packet>::size; ++i)
+    mask.select[i] = false;
+  return pblend(mask, pset1<Packet>(b), a);
+}
+
+/** \internal \returns \a a with the last coefficient replaced by the scalar b */
+template<typename Packet> EIGEN_DEVICE_FUNC inline Packet
+pinsertlast(const Packet& a, typename unpacket_traits<Packet>::type b)
+{
+  // Default implementation based on pblend.
+  // It must be specialized for higher performance.
+  Selector<unpacket_traits<Packet>::size> mask;
+  // This for loop should be optimized away by the compiler.
+  for(Index i=0; i<unpacket_traits<Packet>::size-1; ++i)
+    mask.select[i] = false;
+  mask.select[unpacket_traits<Packet>::size-1] = true;
+  return pblend(mask, pset1<Packet>(b), a);
+}
+
 } // end namespace internal
 
 } // end namespace Eigen
 
 #endif // EIGEN_GENERIC_PACKET_MATH_H
-

extern/Eigen3/Eigen/src/Core/GlobalFunctions.h

@@ -1,7 +1,7 @@
 // This file is part of Eigen, a lightweight C++ template library
 // for linear algebra.
 //
-// Copyright (C) 2010-2012 Gael Guennebaud <gael.guennebaud@inria.fr>
+// Copyright (C) 2010-2016 Gael Guennebaud <gael.guennebaud@inria.fr>
 // Copyright (C) 2010 Benoit Jacob <jacob.benoit.1@gmail.com>
 //
 // This Source Code Form is subject to the terms of the Mozilla
@@ -11,13 +11,30 @@
 #ifndef EIGEN_GLOBAL_FUNCTIONS_H
 #define EIGEN_GLOBAL_FUNCTIONS_H
 
-#define EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(NAME,FUNCTOR) \
+#ifdef EIGEN_PARSED_BY_DOXYGEN
+
+#define EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(NAME,FUNCTOR,DOC_OP,DOC_DETAILS) \
+  /** \returns an expression of the coefficient-wise DOC_OP of \a x
+
+    DOC_DETAILS
+
+    \sa <a href="group__CoeffwiseMathFunctions.html#cwisetable_##NAME">Math functions</a>, class CwiseUnaryOp
+    */ \
   template<typename Derived> \
   inline const Eigen::CwiseUnaryOp<Eigen::internal::FUNCTOR<typename Derived::Scalar>, const Derived> \
-  NAME(const Eigen::ArrayBase<Derived>& x) { \
-    return x.derived(); \
+  NAME(const Eigen::ArrayBase<Derived>& x);
+
+#else
+
+#define EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(NAME,FUNCTOR,DOC_OP,DOC_DETAILS) \
+  template<typename Derived> \
+  inline const Eigen::CwiseUnaryOp<Eigen::internal::FUNCTOR<typename Derived::Scalar>, const Derived> \
+  (NAME)(const Eigen::ArrayBase<Derived>& x) { \
+    return Eigen::CwiseUnaryOp<Eigen::internal::FUNCTOR<typename Derived::Scalar>, const Derived>(x.derived()); \
   }
 
+#endif // EIGEN_PARSED_BY_DOXYGEN
+
 #define EIGEN_ARRAY_DECLARE_GLOBAL_EIGEN_UNARY(NAME,FUNCTOR) \
   \
   template<typename Derived> \
@@ -30,55 +47,133 @@
   { \
     static inline typename NAME##_retval<ArrayBase<Derived> >::type run(const Eigen::ArrayBase<Derived>& x) \
     { \
-      return x.derived(); \
+      return typename NAME##_retval<ArrayBase<Derived> >::type(x.derived()); \
     } \
   };
 
-
 namespace Eigen
 {
-  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(real,scalar_real_op)
-  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(imag,scalar_imag_op)
-  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(conj,scalar_conjugate_op)
-  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(sin,scalar_sin_op)
-  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(cos,scalar_cos_op)
-  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(asin,scalar_asin_op)
-  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(acos,scalar_acos_op)
-  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(tan,scalar_tan_op)
-  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(exp,scalar_exp_op)
-  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(log,scalar_log_op)
-  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(abs,scalar_abs_op)
-  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(sqrt,scalar_sqrt_op)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(real,scalar_real_op,real part,\sa ArrayBase::real)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(imag,scalar_imag_op,imaginary part,\sa ArrayBase::imag)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(conj,scalar_conjugate_op,complex conjugate,\sa ArrayBase::conjugate)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(inverse,scalar_inverse_op,inverse,\sa ArrayBase::inverse)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(sin,scalar_sin_op,sine,\sa ArrayBase::sin)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(cos,scalar_cos_op,cosine,\sa ArrayBase::cos)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(tan,scalar_tan_op,tangent,\sa ArrayBase::tan)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(atan,scalar_atan_op,arc-tangent,\sa ArrayBase::atan)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(asin,scalar_asin_op,arc-sine,\sa ArrayBase::asin)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(acos,scalar_acos_op,arc-consine,\sa ArrayBase::acos)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(sinh,scalar_sinh_op,hyperbolic sine,\sa ArrayBase::sinh)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(cosh,scalar_cosh_op,hyperbolic cosine,\sa ArrayBase::cosh)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(tanh,scalar_tanh_op,hyperbolic tangent,\sa ArrayBase::tanh)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(lgamma,scalar_lgamma_op,natural logarithm of the gamma function,\sa ArrayBase::lgamma)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(digamma,scalar_digamma_op,derivative of lgamma,\sa ArrayBase::digamma)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(erf,scalar_erf_op,error function,\sa ArrayBase::erf)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(erfc,scalar_erfc_op,complement error function,\sa ArrayBase::erfc)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(exp,scalar_exp_op,exponential,\sa ArrayBase::exp)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(log,scalar_log_op,natural logarithm,\sa Eigen::log10 DOXCOMMA ArrayBase::log)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(log1p,scalar_log1p_op,natural logarithm of 1 plus the value,\sa ArrayBase::log1p)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(log10,scalar_log10_op,base 10 logarithm,\sa Eigen::log DOXCOMMA ArrayBase::log)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(abs,scalar_abs_op,absolute value,\sa ArrayBase::abs DOXCOMMA MatrixBase::cwiseAbs)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(abs2,scalar_abs2_op,squared absolute value,\sa ArrayBase::abs2 DOXCOMMA MatrixBase::cwiseAbs2)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(arg,scalar_arg_op,complex argument,\sa ArrayBase::arg)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(sqrt,scalar_sqrt_op,square root,\sa ArrayBase::sqrt DOXCOMMA MatrixBase::cwiseSqrt)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(rsqrt,scalar_rsqrt_op,reciprocal square root,\sa ArrayBase::rsqrt)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(square,scalar_square_op,square (power 2),\sa Eigen::abs2 DOXCOMMA Eigen::pow DOXCOMMA ArrayBase::square)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(cube,scalar_cube_op,cube (power 3),\sa Eigen::pow DOXCOMMA ArrayBase::cube)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(round,scalar_round_op,nearest integer,\sa Eigen::floor DOXCOMMA Eigen::ceil DOXCOMMA ArrayBase::round)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(floor,scalar_floor_op,nearest integer not greater than the giben value,\sa Eigen::ceil DOXCOMMA ArrayBase::floor)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(ceil,scalar_ceil_op,nearest integer not less than the giben value,\sa Eigen::floor DOXCOMMA ArrayBase::ceil)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(isnan,scalar_isnan_op,not-a-number test,\sa Eigen::isinf DOXCOMMA Eigen::isfinite DOXCOMMA ArrayBase::isnan)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(isinf,scalar_isinf_op,infinite value test,\sa Eigen::isnan DOXCOMMA Eigen::isfinite DOXCOMMA ArrayBase::isinf)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(isfinite,scalar_isfinite_op,finite value test,\sa Eigen::isinf DOXCOMMA Eigen::isnan DOXCOMMA ArrayBase::isfinite)
+  EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(sign,scalar_sign_op,sign (or 0),\sa ArrayBase::sign)
   
-  template<typename Derived>
-  inline const Eigen::CwiseUnaryOp<Eigen::internal::scalar_pow_op<typename Derived::Scalar>, const Derived>
-  pow(const Eigen::ArrayBase<Derived>& x, const typename Derived::Scalar& exponent) {
+  /** \returns an expression of the coefficient-wise power of \a x to the given constant \a exponent.
+    *
+    * \tparam ScalarExponent is the scalar type of \a exponent. It must be compatible with the scalar type of the given expression (\c Derived::Scalar).
+    *
+    * \sa ArrayBase::pow()
+    *
+    * \relates ArrayBase
+    */
+#ifdef EIGEN_PARSED_BY_DOXYGEN
+  template<typename Derived,typename ScalarExponent>
+  inline const CwiseBinaryOp<internal::scalar_pow_op<Derived::Scalar,ScalarExponent>,Derived,Constant<ScalarExponent> >
+  pow(const Eigen::ArrayBase<Derived>& x, const ScalarExponent& exponent);
+#else
+  template<typename Derived,typename ScalarExponent>
+  inline typename internal::enable_if<   !(internal::is_same<typename Derived::Scalar,ScalarExponent>::value) && EIGEN_SCALAR_BINARY_SUPPORTED(pow,typename Derived::Scalar,ScalarExponent),
+          const EIGEN_EXPR_BINARYOP_SCALAR_RETURN_TYPE(Derived,ScalarExponent,pow) >::type
+  pow(const Eigen::ArrayBase<Derived>& x, const ScalarExponent& exponent) {
     return x.derived().pow(exponent);
   }
 
   template<typename Derived>
-  inline const Eigen::CwiseBinaryOp<Eigen::internal::scalar_binary_pow_op<typename Derived::Scalar, typename Derived::Scalar>, const Derived, const Derived>
-  pow(const Eigen::ArrayBase<Derived>& x, const Eigen::ArrayBase<Derived>& exponents) 
+  inline const EIGEN_EXPR_BINARYOP_SCALAR_RETURN_TYPE(Derived,typename Derived::Scalar,pow)
+  pow(const Eigen::ArrayBase<Derived>& x, const typename Derived::Scalar& exponent) {
+    return x.derived().pow(exponent);
+  }
+#endif
+
+  /** \returns an expression of the coefficient-wise power of \a x to the given array of \a exponents.
+    *
+    * This function computes the coefficient-wise power.
+    *
+    * Example: \include Cwise_array_power_array.cpp
+    * Output: \verbinclude Cwise_array_power_array.out
+    * 
+    * \sa ArrayBase::pow()
+    *
+    * \relates ArrayBase
+    */
+  template<typename Derived,typename ExponentDerived>
+  inline const Eigen::CwiseBinaryOp<Eigen::internal::scalar_pow_op<typename Derived::Scalar, typename ExponentDerived::Scalar>, const Derived, const ExponentDerived>
+  pow(const Eigen::ArrayBase<Derived>& x, const Eigen::ArrayBase<ExponentDerived>& exponents) 
   {
-    return Eigen::CwiseBinaryOp<Eigen::internal::scalar_binary_pow_op<typename Derived::Scalar, typename Derived::Scalar>, const Derived, const Derived>(
+    return Eigen::CwiseBinaryOp<Eigen::internal::scalar_pow_op<typename Derived::Scalar, typename ExponentDerived::Scalar>, const Derived, const ExponentDerived>(
       x.derived(),
       exponents.derived()
     );
   }
   
-  /**
-  * \brief Component-wise division of a scalar by array elements.
-  **/
-  template <typename Derived>
-  inline const Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_mult_op<typename Derived::Scalar>, const Derived>
-    operator/(const typename Derived::Scalar& s, const Eigen::ArrayBase<Derived>& a)
+  /** \returns an expression of the coefficient-wise power of the scalar \a x to the given array of \a exponents.
+    *
+    * This function computes the coefficient-wise power between a scalar and an array of exponents.
+    *
+    * \tparam Scalar is the scalar type of \a x. It must be compatible with the scalar type of the given array expression (\c Derived::Scalar).
+    *
+    * Example: \include Cwise_scalar_power_array.cpp
+    * Output: \verbinclude Cwise_scalar_power_array.out
+    * 
+    * \sa ArrayBase::pow()
+    *
+    * \relates ArrayBase
+    */
+#ifdef EIGEN_PARSED_BY_DOXYGEN
+  template<typename Scalar,typename Derived>
+  inline const CwiseBinaryOp<internal::scalar_pow_op<Scalar,Derived::Scalar>,Constant<Scalar>,Derived>
+  pow(const Scalar& x,const Eigen::ArrayBase<Derived>& x);
+#else
+  template<typename Scalar, typename Derived>
+  inline typename internal::enable_if<   !(internal::is_same<typename Derived::Scalar,Scalar>::value) && EIGEN_SCALAR_BINARY_SUPPORTED(pow,Scalar,typename Derived::Scalar),
+          const EIGEN_SCALAR_BINARYOP_EXPR_RETURN_TYPE(Scalar,Derived,pow) >::type
+  pow(const Scalar& x, const Eigen::ArrayBase<Derived>& exponents)
   {
-    return Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_mult_op<typename Derived::Scalar>, const Derived>(
-      a.derived(),
-      Eigen::internal::scalar_inverse_mult_op<typename Derived::Scalar>(s)  
-    );
+    return EIGEN_SCALAR_BINARYOP_EXPR_RETURN_TYPE(Scalar,Derived,pow)(
+            typename internal::plain_constant_type<Derived,Scalar>::type(exponents.rows(), exponents.cols(), x), exponents.derived() );
   }
 
+  template<typename Derived>
+  inline const EIGEN_SCALAR_BINARYOP_EXPR_RETURN_TYPE(typename Derived::Scalar,Derived,pow)
+  pow(const typename Derived::Scalar& x, const Eigen::ArrayBase<Derived>& exponents)
+  {
+    return EIGEN_SCALAR_BINARYOP_EXPR_RETURN_TYPE(typename Derived::Scalar,Derived,pow)(
+      typename internal::plain_constant_type<Derived,typename Derived::Scalar>::type(exponents.rows(), exponents.cols(), x), exponents.derived() );
+  }
+#endif
+
+
   namespace internal
   {
     EIGEN_ARRAY_DECLARE_GLOBAL_EIGEN_UNARY(real,scalar_real_op)